ID EU224261; SV 1; linear; genomic DNA; STD; VRL; 2705 BP. XX AC EU224261; XX DT 15-FEB-2008 (Rel. 94, Created) DT 01-MAR-2008 (Rel. 95, Last updated, Version 2) XX DE Panicum streak virus isolate PanSV-A[SBak], complete genome. XX KW . XX OS Panicum streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2705 RX DOI; 10.1007/s00705-007-0020-7. RX PUBMED; 18172570. RA Varsani A., Oluwafemi S., Windram O.P., Shepherd D.N., Monjane A.L., RA Owor B.E., Rybicki E.P., Lefeuvre P., Martin D.P.; RT "Panicum streak virus diversity is similar to that observed for maize RT streak virus"; RL Arch. Virol. 153(3):601-604(2008). XX RN [2] RP 1-2705 RA Varsani A., Oluwafemi S., Shepherd D., Monjane A., Owor B., Windram O., RA Rybicki E., Lefeuvre P., Martin D.; RT ; RL Submitted (17-OCT-2007) to the INSDC. RL Electron Microscope Unit, Dept. of Molecular and Cell Biology, University RL of Cape Town, University Ave, Rondebosch, Cape Town, WP 7701, South Africa XX DR MD5; 526383fb47ef18160ee7cd3512f8d484. DR EuropePMC; PMC2777162; 19903330. XX FH Key Location/Qualifiers FH FT source 1..2705 FT /organism="Panicum streak virus" FT /host="Ehrharta calycina" FT /isolate="PanSV-A[SBak]" FT /mol_type="genomic DNA" FT /country="South Africa:Bakubung" FT /lat_lon="25.23 S 26.75 E" FT /collection_date="Jun-2005" FT /db_xref="taxon:10826" FT CDS 146..469 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:B0Z3V4" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B0Z3V4" FT /protein_id="ABZ79676.1" FT /translation="MDASSSTPFPFPQPPRVPSAAPVAGGLPWSRVGEIVIFTFVSVLG FT LYLLWLWVLKDCILLLKAQRGRSTEELIFGPGERPAVASADGSRPVPDPSPSCPPGPRP FT FVV" FT CDS 480..1223 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B0Z3V5" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B0Z3V5" FT /protein_id="ABZ79677.1" FT /translation="MSGALKRKRSDEVAWSRRKPVKKQARVPPPRAGPSVRRGLPALQI FT QTLIAAGDTMITVPSGGICSLIGTYARGSDEGNRHTNETLTYKVALDYHFVATAAACKY FT SSIGVGVMWLVYDAQPTGNSPEVKDIFPHSDTLSAFPYTWKVGREVCHRFVVKRRWCFT FT METNGRIGSDIPPANTAWPPCKKDLYFHKFCTGLGVKTEWKNVTDGKVGAIKKGALYIV FT IAPGNGLEFTVHGQCRLYFKSVGNQ" FT CDS complement(1588..2562) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:B0Z3V6" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B0Z3V6" FT /protein_id="ABZ79678.1" FT /translation="MSTSLSITSDGRHSVRSFRHRNANTFLTYSKCPLEPEFIGEHLFR FT LTKDFEPAYILVVRETHQDGTWHCHALLQCIKPVTTRDERYFDIDRYHPNIQSAKSTDK FT VREYILKDPKDKWEKGTYIPRKKSFVPPGKENSEKKPSKDEVMKEIMTHATSRAEYLSL FT VQTSLPYDWATKLSYFEYSASRLFPDIAEPYSNPHPATDPDLLCNETLQDWLEPNIYQV FT SPKAYMLLEPSCLSLEQAKADLEWLSETTRLLQEQESAASTSSAQHGQVKHPGPEASDG FT TTTGRTISTGLHMMKKLSTMSLTTFPSSSVRAGSSSSAVKRTT" XX SQ Sequence 2705 BP; 563 A; 713 C; 728 G; 701 T; 0 other; accgctcaca ccccatgcga gccgcggctc tgtgcggcga gcggtccccg gatgttctta 60 ccccggtgcg atttctttag ctgcgtcttc tttagcagct gcccccactg tcctataagt 120 tgctcccccg gtgcgattcc gcatcatgga tgctagcagc tccactcctt ttcctttccc 180 tcagccgcct cgggtaccct ctgcagctcc ggtcgccgga ggcttgccgt ggagtcgcgt 240 cggtgagata gttatcttta cctttgtttc agtgctaggc ctttacctgc tttggctttg 300 ggtgctcaaa gattgtatct tacttctgaa ggctcagcga ggtagatcca cggaggagct 360 gatatttggc cctggtgaga ggccagccgt cgcttctgcc gacggttctc gccccgttcc 420 agatccgtct ccgtcctgtc cgccgggacc tagacctttc gtggtctaga gcactcagca 480 tgtctggagc tttgaagcgc aagcgttcgg atgaggttgc ctggagtcga aggaagcccg 540 tcaagaagca agcccgggtc ccgcctcccc gggctggccc ctccgtcagg agaggactcc 600 ctgcccttca gatccagacg ctcatagcgg ctggtgacac tatgatcacg gtgccgtctg 660 gcggcatctg cagtctgatt ggcacgtatg cccggggttc tgatgaaggt aaccgccaca 720 ccaacgagac tctgacgtac aaggttgcgc tggactacca cttcgttgct actgctgcgg 780 cctgcaagta ctccagcatt ggagtgggtg tcatgtggtt ggtgtatgat gcgcagccga 840 ccggcaattc accggaggtg aaggacatct tccctcactc cgacacgctc tcagcgttcc 900 cctacacttg gaaggttggc agggaggtct gccatcgctt cgttgttaaa cggcgctggt 960 gcttcaccat ggagactaac ggccggatcg gttcagatat ccctccggcc aataccgctt 1020 ggccgccatg taagaaggac ctctacttcc acaagttctg cacgggactc ggcgtgaaga 1080 cggagtggaa gaacgtgaca gacgggaagg tcggcgctat taagaagggc gccttgtaca 1140 tagtcattgc gcctggaaac gggcttgagt ttacggttca cggccagtgc cgtctgtact 1200 ttaagtcagt tggtaatcag tgattaccac atcaattaat aaaacaagtt ttattcaagg 1260 agcgaagctc atacattaca tagtcagcag atgtgctgac agaaaacaca cacatagtgc 1320 agcctcgggc taaagaccga gtctcaaacg acccaactta aaaacaaatc aaaacaagca 1380 tgatattatt aaatatgcag ccgccggctt aagcaggagt gaaccatttc tctcctgcct 1440 gcattacgta gatttcgcag tttgcgtaga agtagtcgta ctgcgccgga gtcatgtcct 1500 tcagccagtc ctcatcctcg ttggcgagga tgatagttgg aatgctcttt gaggccacct 1560 tccgtctctt cccgtacttc gggttcacta tgtagtcctt ttgacagccg acgagctgct 1620 tccagcacgg acagaacttg aagggaatgt cgtcaacgac attgtagaca gcttcttcat 1680 catatgaaga ccagtcgata ttgttctgcc agtagttgtg ccgtccgagg cttctggccc 1740 aggatgtttt acctgtccgt gttgggccga cgatgtagag gctgcgcttt cttgctcctg 1800 gagtaatctg gttgtttcag acaaccattc taagtcagct ttggcctgct ctaggcttaa 1860 gcagctaggt tcaaggagca tgtatgcttt aggactgacc tggtagatgt taggctcaag 1920 ccagtcctgg agtgtttcgt tgcagaggag gtcagggtca gtggcaggat gaggattgct 1980 gtaaggctct gcaatgtccg ggaataggcg actagctgag tactcaaagt atgacagttt 2040 tgtggcccag tcgtaaggca gtgaagtctg cactagtgaa aggtactctg ctctgctagt 2100 ggcatgtgtc atgatctcct tcatgacctc atccttagaa ggcttcttct cagaattttc 2160 cttacctgga ggaacgaagc tcttcttcct tggtatgtaa gtacctttct cccacttgtc 2220 cttgggatcc ttcagtatgt actcacgtac cttgtcagta ctcttggcgc tctgtatatt 2280 cggatgatac cgatctatgt caaagtacct ctcatcacga gtagtgacag gcttgatgca 2340 ctggagaaga gcatggcagt gccatgttcc atcttggtga gtctctctca ctaccaggat 2400 gtatgctggc tcaaagtcct tagtgagcct gaagagatgc tcaccgatga actcaggttc 2460 tagtggacac ttgctgtatg tgaggaaggt gtttgcgttc cggtgcctaa aggaccggac 2520 gctgtgtctg ccatcagagg tgattgacag agaggtcgac attagcgcag gaggttgggc 2580 aatctcaggc tctcctcagc tctatcccta gacagctgcg aaataatccg cccacccccc 2640 gtgcctttta tagctgcttg gtgggctggg ccggccggcc catggggtgt gagcagcata 2700 atatt 2705 //