ID   EU216023; SV 1; linear; genomic RNA; STD; VRL; 828 BP.
XX
AC   EU216023;
XX
DT   01-JAN-2008 (Rel. 94, Created)
DT   27-FEB-2011 (Rel. 108, Last updated, Version 3)
XX
DE   Capsicum chlorosis virus isolate CaCV_To_Har nucleocapsid (N) gene,
DE   complete cds.
XX
KW   .
XX
OS   Capsicum chlorosis virus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Tospoviridae; Orthotospovirus;
OC   Capsicum chlorosis orthotospovirus.
XX
RN   [1]
RP   1-828
RX   DOI; 10.1007/s00705-010-0681-5.
RX   PUBMED; 20443030.
RA   Kunkalikar S.R., Sudarsana P., Rajagopalan P., Zehr U.B., Ravi K.S.;
RT   "Biological and molecular characterization of Capsicum chlorosis virus
RT   infecting chilli and tomato in India";
RL   Arch. Virol. 155(7):1047-1057(2010).
XX
RN   [2]
RP   1-828
RX   DOI; 10.1094/PHYTO-02-10-0046.
RX   PUBMED; 21299415.
RA   Kunkalikar S.R., Poojari S., Arun B.M., Rajagopalan P.A., Chen T.C.,
RA   Yeh S.D., Naidu R.A., Zehr U.B., Ravi K.S.;
RT   "Importance and genetic diversity of vegetable-infecting tospoviruses in
RT   India";
RL   Phytopathology 101(3):367-376(2011).
XX
RN   [3]
RP   1-828
RA   Ravi K.S., Kunkalikar S.R., Sudarsana P., Rajagopalan P.A., Zehr U.B.,
RA   Naidu R.A.;
RT   ;
RL   Submitted (11-OCT-2007) to the INSDC.
RL   Molecular Virology, Mahyco Life Science Research Center, Dawalwadi, Jalna,
RL   Maharashtra 431203, India
XX
DR   MD5; d7154820aa6c1af88444ee8e5d9d1fe6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..828
FT                   /organism="Capsicum chlorosis virus"
FT                   /host="tomato"
FT                   /isolate="CaCV_To_Har"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Haryana, North India"
FT                   /PCR_primers="fwd_seq: catgccatggcaatgtctamcgtyaagcaact,
FT                   rev_seq: ccgctcgagcamttccarmgaagkrcyag"
FT                   /note="serogroup: WSMoV"
FT                   /db_xref="taxon:163325"
FT   gene            1..828
FT                   /gene="N"
FT   CDS             1..828
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid"
FT                   /db_xref="GOA:A9YG63"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:A9YG63"
FT                   /protein_id="ABY40720.1"
FT                   /translation="MSNVKQLTEKKIRELLAGGTADVEIETEDSTPGFSFKTFYDNNKS
FT                   VEMTFTNCLNILKCRKQIFAACKSGKYKFCEKTIVSTDANVGPEDWTFKRTEALIRVKM
FT                   INMVEKNKNEAAKQEMYAKVMELPLVAAYGLNIPALFDSCALRMMLCIGGPLPLLSSIK
FT                   GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKEDLNTLFKQAVKL
FT                   LSESNPGTASSISLKKYDEQVKYMDKAFSANLSVDDYGVHSKKNSKPGPSLEV"
XX
SQ   Sequence 828 BP; 277 A; 130 C; 174 G; 247 T; 0 other;
     atgtctaacg tcaagcaact taccgagaag aaaattagag aactcttggc tggtggaact        60
     gcagatgttg aaattgaaac tgaggattca actcctggat tcagtttcaa gacattctat       120
     gataataaca aaagcgttga aatgacattc acaaactgtc ttaatatttt gaagtgtaga       180
     aagcagattt ttgctgcttg caaaagtgga aagtataagt tctgtgaaaa aacaattgtt       240
     tctacggatg ctaatgttgg tccagaggat tggactttta agagaacaga agctttgata       300
     agagttaaga tgatcaacat ggtagagaag aataaaaatg aagctgctaa acaagagatg       360
     tatgcaaagg taatggaatt acctttagtg gcagcatatg gattgaacat acctgctttg       420
     tttgattcat gtgctctcag gatgatgtta tgtattggtg gtcctctacc actattatcc       480
     agtattaagg gccttgcacc aattattttc ccactagctt attaccaaaa tgttaaaaaa       540
     gagaaattgg gcatcaaaaa cttctctacc tatgaacagg tttgtaaagt ggctaaagtt       600
     ctttctgctt ctcaaataga atttaaggaa gatctgaaca cactgttcaa acaggctgtc       660
     aagttgctta gtgaaagcaa ccctggtact gctagttcca tctcacttaa gaagtatgat       720
     gagcaagtta aatatatgga caaagcattt agtgctaatt tgtctgtgga cgattatggt       780
     gttcattcaa agaagaactc aaagcctggt ccttcgctgg aagtgtaa                    828
//