ID EU200669; SV 1; linear; genomic DNA; STD; VRL; 5105 BP. XX AC EU200669; XX DT 26-JUL-2008 (Rel. 96, Created) DT 26-JUL-2008 (Rel. 96, Last updated, Version 1) XX DE Bovine hokovirus strain HK1 non-structural protein (NS1), minor structural DE protein (VP1), and major structural protein (VP2) genes, complete cds. XX KW . XX OS Bovine hokovirus 1 OC Viruses; Parvoviridae; Parvovirinae; Tetraparvovirus. XX RN [1] RP 1-5105 RX DOI; 10.1099/vir.0.2008/000380-0. RX PUBMED; 18632954. RA Lau S.K., Woo P.C., Tse H., Fu C.T., Au W.K., Chen X.C., Tsoi H.W., RA Tsang T.H., Chan J.S., Tsang D.N., Li K.S., Tse C.W., Ng T.K., Tsang O.T., RA Zheng B.J., Tam S., Chan K.H., Zhou B., Yuen K.Y.; RT "Identification of novel porcine and bovine parvoviruses closely related to RT human parvovirus 4"; RL J. Gen. Virol. 89(Pt 8):1840-1848(2008). XX RN [2] RP 1-5105 RA Woo P.C.Y., Lau S.K.P., Tse H., Fu C.T.Y., Au W.-K., Tsoi H.-W., RA Tsang T.H.F., Chan J.S.Y., Tsang D.N.C., Tse C.W.S., Ng T.-K., RA Tsang O.T.Y., Zheng B.-J., Tam S.C.F., Chen X.-C., Zhou B., Chan K.-H., RA Yuen K.-Y.; RT ; RL Submitted (10-OCT-2007) to the INSDC. RL Department of Microbiology, The University of Hong Kong, Pokfulam Road, RL Hong Kong, China XX DR MD5; f811710647b5d22601ac00a82be1df98. DR EuropePMC; PMC3181347; 21980506. XX FH Key Location/Qualifiers FH FT source 1..5105 FT /organism="Bovine hokovirus 1" FT /strain="HK1" FT /mol_type="genomic DNA" FT /country="China" FT /db_xref="taxon:494651" FT gene 202..2160 FT /gene="NS1" FT CDS 202..2160 FT /codon_start=1 FT /gene="NS1" FT /product="non-structural protein" FT /db_xref="GOA:B4XXD3" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR014835" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:B4XXD3" FT /protein_id="ABY67682.1" FT /translation="MDATCFTAVLQVPTVFCDAVPVQFQQPSVVLREVPDEYPDWPVSD FT LRQYASHFDLAVNLGHILYRELLESFSMILPLYPQPKLFLQLEPSKSDDREFHYHLVCE FT QGQMSGREFSTWLKRWRTFMDRYMAGHHVWGLLWNIRKTRQGRLYQADLSFVVRYLLPK FT LPVENCWFAWSNIDRFQASLLSVPNRVRCLGEGGAIALPYVEGAVALPGGQAVSEAPSM FT GGKGTDRFLSLIDWLVEQGIATERRWLSADKRSYRSFLGSSGGVLQARNALLVARREMV FT LAHPLLGYLQRGGSAVAADNRVIELFKLNAYDPEDAAWYFAAWAQGIWPKRRALWLWGP FT ASTGKTLLAAAIANISPSYGCVNWTNQNFPFNDCHCQSLVWWEEGRMTENIVEVAKAIL FT GGAPVRLDVKNKGSEDFIPTCVIITSNGDLTVTVDGPVVSTVHQEALQTRITMFQFNRL FT VPPGLAPIPEADLHDFFKWGSELLKDKGSPPEAFRVPRRFDKPTLSDVSRSPRLPIRDV FT IESRESWSSEDEWFPSSRSSSAIRPRTSTPQSSPAASPPTPDTAAALASGPFPEADSDE FT ERYARAADDPLIESWWCQYLADFDWAERLYLVGPQGPRARGLFYYQLWIREPWRYRRTL FT RHSESALKSKLYSWWNW" FT gene 2274..5069 FT /gene="VP1" FT CDS 2274..5069 FT /codon_start=1 FT /gene="VP1" FT /product="minor structural protein" FT /db_xref="GOA:B4XXD1" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR013607" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR036952" FT /db_xref="UniProtKB/TrEMBL:B4XXD1" FT /protein_id="ABY67683.1" FT /translation="MSAADAYRPGDRLPLDTLMSKITYDVGFEPTRHGGRGGGGYLGEL FT TTGLLFTKAFHELSRYASNLPYELFPIRQLVNQLINKRRETNNIHKVMRFFMDVIRLLL FT TVSHGPAEQRLRQAMAPVADFFYEPSRHQFAIGPNVSPLQDLARYAHTAQKPTREAIEA FT FFQGMLSPIKPEDRPILDTIQKQFEEFFYPPIVEHAGPGDYSRDGDTGAGTPSESDLER FT PANRGLLVPGYNYVGPGNPLDNGPPQGPVDEAAKHHDERYDEMLSHGDLPYVHGHGADR FT LMNKEIERAEKEGRVTGVGDKLLGNVIRGIWEAKETIGDVADVQISQVLPPAPPPQVPG FT VDSSDGLPSSKRARPGIPEDPVATDFDLASPDPIVAPDMASEATGGAGGGIKVKAQWIG FT GTSFTDSLILTAHTRTSMLADRGGYVPVYRKGSHTDESQPVMGMRTPYSYIDVNAISAH FT LTPRDFQQLLDEYEEIRPKKLIVGISAIVIKDVATTSTGTTVSDSASGGITIFSDDGYE FT YPYVLGHNQDTLPGHLPGENYVLPQYGYLTRGREIDSSSSHDIVGIADHKTELYFLEHH FT DAQCLGSGDTWSHVYDFPTDLPFRRLSTPSQTLYGRHNPIPSSRLAIMTGVDSQGKAVW FT KRPTGMDVGRLPLNHVPGPALMTPTDSQLKNLTFRAPVAIGHPQTSDRYAINPLVHQPW FT SVRTEDQDGGTYSVHNYLGGVAYTPRLHEESYEGYQEEIDGTVSNPSRVVVTDTDLAAP FT HIGHTFYVPGHQRVSGSGTETEFNPKLYQEPVFPLFPGAVWNPNPLSFDCQIWTKIPDT FT ECHFFAQYPLLGGWGMANPPPMIFLKLRAQPGPPSAGAHTVSKSNLNQYAIFHLHYSME FT FEVKRRRRSRRHNPEKPAPFPVTESGRMPFTLANDKTDPSKAVYEVPADQWIAQNYSHK FT L" FT gene 3408..5069 FT /gene="VP2" FT CDS 3408..5069 FT /codon_start=1 FT /gene="VP2" FT /product="major structural protein" FT /db_xref="GOA:B4XXD2" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR036952" FT /db_xref="UniProtKB/TrEMBL:B4XXD2" FT /protein_id="ABY67684.1" FT /translation="MASEATGGAGGGIKVKAQWIGGTSFTDSLILTAHTRTSMLADRGG FT YVPVYRKGSHTDESQPVMGMRTPYSYIDVNAISAHLTPRDFQQLLDEYEEIRPKKLIVG FT ISAIVIKDVATTSTGTTVSDSASGGITIFSDDGYEYPYVLGHNQDTLPGHLPGENYVLP FT QYGYLTRGREIDSSSSHDIVGIADHKTELYFLEHHDAQCLGSGDTWSHVYDFPTDLPFR FT RLSTPSQTLYGRHNPIPSSRLAIMTGVDSQGKAVWKRPTGMDVGRLPLNHVPGPALMTP FT TDSQLKNLTFRAPVAIGHPQTSDRYAINPLVHQPWSVRTEDQDGGTYSVHNYLGGVAYT FT PRLHEESYEGYQEEIDGTVSNPSRVVVTDTDLAAPHIGHTFYVPGHQRVSGSGTETEFN FT PKLYQEPVFPLFPGAVWNPNPLSFDCQIWTKIPDTECHFFAQYPLLGGWGMANPPPMIF FT LKLRAQPGPPSAGAHTVSKSNLNQYAIFHLHYSMEFEVKRRRRSRRHNPEKPAPFPVTE FT SGRMPFTLANDKTDPSKAVYEVPADQWIAQNYSHKL" XX SQ Sequence 5105 BP; 1296 A; 1194 C; 1294 G; 1321 T; 0 other; ttccggttcc ggtgacatca cttccgctta cgtgtttccg gttccggtac gtcacttccg 60 cttccggcgg atgctgacgt gtccttgcgg acaggaagat gatgtggact tccgggacag 120 cccaccctcg ccacacctac ctcgccctta agaatcagtc tcaggctgtg cacttccttt 180 tcggatcagc cgccgaagag aatggacgcc acctgcttca ccgctgtgct ccaggtcccc 240 actgtcttct gtgatgccgt gcctgtgcag tttcaacaac cttctgtggt cctaagagag 300 gtaccagacg agtatccaga ctggcccgtg agtgatctgc gtcaatatgc aagccacttt 360 gatctggcag ttaacttagg ccacatattg tatagggagt tactggagtc tttttctatg 420 atacttccat tgtatcccca gccaaagttg tttctgcagt tagaaccaag taagtcagat 480 gatcgggaat ttcattatca tttagtgtgt gagcaggggc agatgtctgg gagagagttt 540 tcaacttggc tgaaaagatg gcgcaccttt atggaccgat acatggcagg tcaccatgta 600 tgggggttgc tatggaatat taggaagact cgccagggca gactatacca ggctgacctg 660 agctttgtag tgaggtattt gctacccaag ttgcctgtag aaaactgttg gtttgcttgg 720 agtaacatag acagatttca ggcctctttg ttaagtgtcc ccaaccgtgt caggtgttta 780 ggagagggtg gagctattgc tctgccatat gtagaagggg cagttgcact tcccggcggc 840 caagctgtat cagaagctcc tagcatggga ggtaaaggta ctgaccgttt tttgtcactc 900 attgactggt tagtagaaca gggcatagct actgaacgta gatggctaag tgcagacaag 960 cgcagctata gaagttttct agggtcaagt ggtggagtct tacaggccag aaatgctttg 1020 ttagttgcaa gaagagagat ggttctcgct caccccctgt taggctattt acaaagggga 1080 ggttctgccg tagcagcaga taacagggtg atagagctct ttaaacttaa tgcatatgat 1140 ccagaggatg cggcttggta ttttgcagct tgggctcaag gcatttggcc aaaacgcaga 1200 gcattgtggc tctggggccc tgcgagtacg ggtaagacat tgttagccgc agcaattgct 1260 aacatcagtc cttcttatgg atgtgtgaat tggactaacc aaaattttcc tttcaatgat 1320 tgtcattgtc agtctcttgt atggtgggag gaaggccgta tgacagagaa tattgttgag 1380 gtggccaaag ctattctagg tggagcacca gtcaggctag atgtaaagaa taaaggcagt 1440 gaagacttta tacccacctg tgttattatc acgtcaaatg gagatttgac ggtgactgta 1500 gatgggcctg tagttagtac tgtgcatcaa gaggcattgc agacgcggat caccatgttt 1560 cagtttaacc gtttggtccc tcccggatta gcaccgatac cagaagcaga tttgcatgac 1620 ttttttaagt ggggcagcga gctattaaaa gacaagggca gtccacctga agctttcaga 1680 gtgccacgta ggtttgacaa gcctactctg agtgacgtgt cacgcagtcc tcgactgcca 1740 atcagagacg tgatagaatc tcgcgagtct tggagctctg aagatgagtg gttccccagt 1800 tcgcgaagtt cttcggcgat tcgtccgagg acgagtactc cgcagagctc tccagcagct 1860 agccctccta caccggacac ggcagcggcg ttggcgtccg ggccgtttcc agaggctgac 1920 tccgacgaag aaaggtatgc tcgtgctgcg gatgatcctc tgatagagag ttggtggtgt 1980 cagtacctgg ccgactttga ctgggcagaa cggttgtact tggtgggacc acaaggccct 2040 cgcgcacgag gtcttttcta ctatcagctg tggatcagag agccttggcg gtatcgtcga 2100 accttgcgac attcagaatc cgcactcaag agcaaattat attcttggtg gaactggtag 2160 ggtaagtaca catgctacat ctgtttatgt ctttcagatc taagagtgaa aacacttctt 2220 ctcagaagaa ggtgactcag tccaagtaat ctcttctcct aacaggtaag accatgtccg 2280 ctgcagatgc ctaccgcccc ggtgatcgac tccctctgga taccctgatg agtaaaataa 2340 cctatgacgt gggctttgaa ccaacccgtc acggtgggag aggtggtgga ggctatctag 2400 gagaacttac aactggtctg ctgtttacta aagcctttca cgagcttagc cgctatgcaa 2460 gcaacctccc atatgagctg tttccaatta ggcaactagt aaatcagtta atcaataaaa 2520 ggcgagaaac aaacaacatc cataaagtta tgaggttttt catggatgtc atcagacttc 2580 tgcttactgt gtcacatgga ccggctgagc agcgactgag gcaggcaatg gctcctgtag 2640 cagacttttt ctatgaaccc agtaggcacc agttcgctat cggcccaaat gtatcccctt 2700 tgcaagactt ggctagatac gctcatacag ctcaaaaacc tactcgagaa gcaattgaag 2760 ccttttttca gggcatgtta tctcccatca aacctgaaga tagacctata ttagacacca 2820 tacagaagca gtttgaggag tttttttatc ctcctatagt ggaacatgct ggaccaggcg 2880 actacagtcg cgacggtgat acgggagctg gtacccctag tgaatcagac cttgagcgcc 2940 ctgccaaccg cggactcttg gtccccggct acaattatgt tggtcctggt aatcctctgg 3000 ataatggtcc ccctcaggga ccagtggatg aggcagcgaa gcaccacgat gaacggtacg 3060 atgaaatgtt gtctcatggc gacctgccat atgttcatgg tcacggggca gatagattga 3120 tgaacaaaga gattgaaagg gctgaaaaag aagggcgtgt gaccggtgtg ggtgataagc 3180 tactgggtaa tgtaattcga gggatatggg aagcaaaaga aacaattggt gatgtggcag 3240 atgttcaaat ttcacaggtt ttaccccccg cgcccccgcc tcaagtcccg ggagtggact 3300 cttcagacgg tctcccttca tccaagaggg cgagacctgg tatccctgaa gaccccgttg 3360 caactgattt tgaccttgct tcgcctgacc cgattgttgc tccagacatg gcttcagagg 3420 ctaccggggg tgccggaggc ggcataaaag taaaagctca atggattggt gggacgtcgt 3480 ttacagactc tttaattctt actgcccata ctcgcacttc aatgttggct gaccgtgggg 3540 ggtatgttcc agtttaccgc aaaggcagcc acacagatga gagtcagccc gttatgggca 3600 tgcgtacgcc ttactcttat atagatgtca atgctatatc tgcacacctc acgcccagag 3660 attttcaaca attattagat gagtatgaag aaattagacc caaaaagctt atagttggca 3720 ttagtgctat tgtgattaaa gatgttgcta ccacctctac tggtactacg gtttctgaca 3780 gtgctagcgg aggcatcacc atcttcagtg atgacggtta tgagtaccct tatgtattgg 3840 ggcataatca agacactttg ccaggccact tacccgggga gaactatgtg cttccccagt 3900 atgggtatct aaccagggga cgtgagattg atagttcatc ttctcatgat atagtgggca 3960 tagctgacca taaaactgaa ttgtattttt tagaacacca cgatgctcag tgcttagggt 4020 ccggggatac atggtctcat gtttatgact ttcctacaga tttgcctttt cgtagactca 4080 gcactcccag tcaaaccttg tatgggagac ataaccctat acccagctct cgtctggcta 4140 taatgacagg ggtagactct caaggtaaag ctgtgtggaa aagacctacc ggcatggacg 4200 tgggacggtt acctctcaat catgtgccag ggcctgcact catgaccccc acagacagcc 4260 agttaaagaa tcttactttc agagccccag tggcaatagg acacccacag actagtgaca 4320 gatatgctat caatcctttg gttcatcagc catggtctgt gaggacagaa gatcaagatg 4380 gtgggaccta ttcagtacac aattatttgg gaggtgtggc atataccccc agattacatg 4440 aagaatctta cgagggttac caagaggaga ttgatggtac tgtctccaac ccgtcaaggg 4500 tggttgtgac agacacagac ctagcagcgc ctcatattgg gcatacattt tatgttcctg 4560 ggcatcagcg agttagtggc agtggaacag agacagagtt taaccctaaa ttatatcaag 4620 agccagtgtt ccccctgttt ccaggagcag tttggaatcc caatccacta tcttttgact 4680 gccagatctg gacaaagatt ccagatacag aatgtcactt ctttgctcag tacccgctcc 4740 ttggaggttg gggaatggca aatccgcctc ccatgatttt cctgaaactc cgtgcccaac 4800 cagggccgcc ttcggccggg gcacatacag tgtctaagag caacctgaac cagtatgcaa 4860 tctttcactt acattattca atggaatttg aggtaaagcg tcgccgtagg tcgcgacgcc 4920 ataacccaga aaagcctgcg ccgttcccag tcacagagtc tggacgaatg cctttcaccc 4980 tggcaaatga caaaacagat ccctctaaag ctgtgtatga agttcctgca gatcaatgga 5040 ttgctcaaaa ttactcccat aaattgtaat gctttaataa acgtgattat acctgatgtc 5100 attgg 5105 //