Dbfetch
ID EU195327; SV 1; linear; genomic RNA; STD; VRL; 2344 BP. XX AC EU195327; XX DT 05-NOV-2007 (Rel. 93, Created) DT 09-APR-2009 (Rel. 100, Last updated, Version 2) XX DE Primula malacoides virus China/Mar2007 putative capsid protein gene, DE complete cds. XX KW . XX OS Primula malacoides virus China/Mar2007 OC Viruses; Riboviria; Partitiviridae; Betapartitivirus. XX RN [1] RP 1-2344 RX DOI; 10.1007/s00705-009-0342-8. RX PUBMED; 19267226. RA Li L., Tian Q., Du Z., Duns G.J., Chen J.; RT "A novel double-stranded RNA virus detected in Primula malacoides is a RT plant-isolated partitivirus closely related to partitivirus infecting RT fungal species"; RL Arch. Virol. 154(4):565-572(2009). XX RN [2] RP 1-2344 RA Tian Q., Li L., Du Z., Chen J.; RT ; RL Submitted (05-OCT-2007) to the INSDC. RL Life Science Department, Institute of Bioengineering, Zhejiang Sci-Tech RL University, Xiasha Road 2, Hangzhou, Zhejiang 310018, China XX DR MD5; ea15d8c2eeb264ab02e63b12bf513e06. XX FH Key Location/Qualifiers FH FT source 1..2344 FT /organism="Primula malacoides virus China/Mar2007" FT /segment="RNA2" FT /host="Primula malacoides Franch." FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="Mar-2007" FT /db_xref="taxon:479713" FT CDS 94..2115 FT /codon_start=1 FT /product="putative capsid protein" FT /db_xref="UniProtKB/TrEMBL:A8W7G2" FT /protein_id="ABW82142.1" FT /translation="MSDTVLQAKTNFLKNKSPVLSVQESKRPKISRDLMPLFQSNTAAR FT SDSSNQWTIDVFPNMVPITMYIMLTSIAHANDVDHRTTSKVSVATICMYHLSIVYGYFL FT LNDMITRASASAHARPWIETSWKREFADFLLTLPVPEFLTPFLSQFQHFTTDRTKNVFL FT TPSAAGFDHNIFFGRVFPLNMFSAIHDCTATLPGNTPRIQVLQDLYSRVLYTITAPGFT FT CLIPDLIGVTIDQTTPTTANYMNSKLYQVYTAVFNPVLFRDFQHRSSLAALSFQSPVFA FT NNHVNAYDLLFSASAANLRELKVVLQVVSTVLDGKVTTSGTLGDFLTKPSGALAIKHGY FT STYALPTWSYNTNATKSAVYSAITTLTLTSERDRAQDICFLQRPAAAFNATTEVTDVTY FT AATATPNQAVQLPTGHQLTRHFPFSLLQVPNGAEPFPRHDNDDLVQFSDFVHTAPSVLV FT LDTDGELTISAHLPLLAGKIIESFEIDGSTIEMPNVDKSLGLQNCLFADSAVSYRLVRP FT GSAFHPQPAGSINPPLNRVRPNPRPRLPASSLLYDRTEIMLPNMNNRIVEARAPDTLPG FT MTRRAAVNFLRYAQSFFGFHTVDSSSNALSLDTIPGMTNGLLHLWSPYSYTPFENDYFP FT DPDLAESRHYFLSNLRTIFGTDYNLVQAKHPYEALPVV" XX SQ Sequence 2344 BP; 601 A; 644 C; 351 G; 748 T; 0 other; gattttttta aaccggcccc ccgcttaaaa atttagaatt tacattcgtc tacaaaatca 60 agttcttaca aaacccctgc tctttttata acaatgtctg ataccgtcct tcaagctaag 120 actaacttcc ttaagaataa gtcacctgtc cttagtgtcc aagaaagcaa acgacctaaa 180 atctcacgcg acctaatgcc acttttccaa agtaacactg ctgctcgctc tgactcatcc 240 aaccaatgga ctattgatgt ctttccaaac atggttccta ttactatgta tatcatgctc 300 acctcaattg ctcacgccaa tgatgttgac caccgcacta cctccaaagt gtccgttgca 360 actatttgca tgtaccatct ctccatcgtc tacggttatt tccttctcaa tgacatgatt 420 actcgtgcct ccgcttctgc tcatgcccgc ccctggattg aaacttcctg gaaacgcgaa 480 ttcgccgact ttttgctcac actccccgtc cctgagtttc ttacgccttt cctttctcaa 540 ttccaacact ttactactga tcgtactaag aatgtcttcc ttacaccttc tgctgctggc 600 tttgaccata atatattctt tggccgtgtc tttcctctca acatgttttc tgcaatccat 660 gattgcaccg ctaccctgcc tggtaatact ccacgcatcc aagttttaca agacttatat 720 agtcgtgttc tgtatacaat tactgctcct ggcttcactt gcttaatccc tgatttaatt 780 ggtgtcacaa tcgatcaaac cactccgact actgcaaact atatgaattc caagctgtac 840 caagtctaca ccgccgtctt taatcctgtc ttatttcgcg atttccaaca tcgttcatca 900 cttgctgctc tttcattcca gtctcctgtg tttgctaaca atcacgtcaa cgcctatgat 960 ttactgtttt ctgcttccgc cgctaattta cgcgaattga aagttgttct acaagttgtc 1020 tctaccgtcc ttgacggaaa agttaccaca tccggtaccc ttggtgattt cctcacgaaa 1080 ccttctggtg ccttagctat aaaacatggt tattcaacct atgctctacc aacctggtca 1140 tacaacacta acgcaacaaa atctgctgtc tatagtgcta ttacgacttt gactctcact 1200 tccgaacgag atagagccca agacatttgt ttcctccaac gccctgctgc tgcatttaat 1260 gctacaactg aagttactga tgtaacttat gctgctactg ctactccaaa tcaagctgtt 1320 cagttaccaa ctggtcacca acttacaagg cacttcccct tttccttgct ccaagttcca 1380 aatggtgcgg aaccttttcc gcgccatgat aatgatgact tagtccagtt ttctgacttt 1440 gtgcacactg ctccaagcgt tctcgtcctc gatactgatg gtgaattaac catctctgct 1500 cacttgccac tccttgctgg caaaattatt gaatctttcg aaattgatgg ttctaccatc 1560 gaaatgccga atgttgataa gtctctcggc ctacaaaact gtctgtttgc tgactctgct 1620 gttagttata gactagtccg ccctggctcc gcttttcacc cgcaacccgc tggatcaata 1680 aacccccctc ttaatcgagt tcgccccaac ccccgtcccc gcttacctgc gtcaagcctg 1740 ctctatgatc gtactgaaat catgctcccg aacatgaaca atcgtatagt tgaagctcgt 1800 gcccctgata ccttacccgg tatgactaga cgtgctgccg taaacttttt acgttatgcg 1860 caatctttct tcggttttca caccgtagat tctagttcaa atgctctttc tcttgacacc 1920 attcccggaa tgacgaatgg tctgttacac ctctggtctc catactctta cactccgttt 1980 gagaatgact actttccaga cccagacctc gctgaatcaa ggcactactt cttgtccaat 2040 ctgcgtacca tttttggtac tgactacaat cttgttcaag ccaagcaccc ttatgaagct 2100 ctccctgttg tttaggctga ttctctcttt ttctcgaaat tttatttcta gttttgatgt 2160 ttattaggct tccctttcaa caactacgtg tatgctacgt agtcttttgt ttcgatttta 2220 tttgtacctg tactttcttt tttcgttatt ttctgttcta gaaaaaaaaa aaaaaaaaaa 2280 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa caaaaaaacc aaaaaaaagt 2340 tccc 2344 //