ID EU161286; SV 1; linear; genomic RNA; STD; VRL; 2780 BP. XX AC EU161286; XX DT 15-OCT-2007 (Rel. 93, Created) DT 29-MAY-2008 (Rel. 95, Last updated, Version 2) XX DE Paralichthys olivaceus birnavirus segment B, complete sequence. XX KW . XX OS Paralichthys olivaceus birnavirus OC Viruses; Riboviria; Birnaviridae; Aquabirnavirus. XX RN [1] RP 1-2780 RX DOI; 10.1007/s00705-008-0075-0. RX PUBMED; 18398563. RA Zhao Z., Ke F., Li Z., Gui J., Zhang Q.; RT "Isolation, characterization and genome sequence of a birnavirus strain RT from flounder Paralichthys olivaceus in China"; RL Arch. Virol. 153(6):1143-1148(2008). XX RN [2] RP 1-2780 RA Zhao Z., Ke F., Zhang Q.Y.; RT ; RL Submitted (18-SEP-2007) to the INSDC. RL State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of RL Hydrobiology, Chinese Academy of Sciences, 7 Donghu South Road, Wuhan, RL Hubei 430072, China XX DR MD5; a1792d801134fbd996bdcfff924cbc0b. XX FH Key Location/Qualifiers FH FT source 1..2780 FT /organism="Paralichthys olivaceus birnavirus" FT /segment="B" FT /host="Paralichthys olivaceus (Japanese flounder)" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:475879" FT gene 101..2638 FT /gene="VP1" FT CDS 101..2638 FT /codon_start=1 FT /gene="VP1" FT /product="RNA depended RNA polymerase" FT /note="RdRp" FT /db_xref="GOA:A8IFB1" FT /db_xref="InterPro:IPR007098" FT /db_xref="InterPro:IPR007100" FT /db_xref="UniProtKB/TrEMBL:A8IFB1" FT /protein_id="ABW07822.1" FT /translation="MSDIFNSPQNKASILSALMKSTAGDVEDVLIPKRFRPAKDPLDSP FT QAAAQFLKDNKYRILRPRAIPTMVELETDAALPRLRQMVDDGKLKDTVSVPEGTTAFYP FT KYYPFHKPDHDEVGTFGAPDVTLLKQLTFFLLENDFPTGPETLRQVREAIATLQYGSGS FT YSGQLNRLLAMKGVATGRNPNKTPKTVGYSNEQLAKLLEQTLPINPPKNEDPDLRWAPS FT WLINYTGDQSTDKSYLPHVTVKSSAGLPYIGKTKGDTTAEALVLADSFIRDLGKAATSA FT DPGTEVKKTITDFWYLSCGLLFPKGERYTQVDWDKKTRNIWSAPYPTHLLLSMVSSPVM FT EESKLNITNTQTPSLYGFSPFHGGMDRIMTIIRNSLDTGEDLVMIYADNIYILQDDTWY FT SIDLEKGEANCTPQHMQAMMYYLLTRGWTNEDGSPRYNPTWATFAMNVAPSMVVDSSCL FT LMNLQLKTYGQGSGNAFTFLNNHLMSTIVVAEWVKAGKPNPMTKEFMDLEEKTGINFKI FT ERELKNLREVIMEAVETAPQDGYLADGSDLPPHKPGRAVELDLLGWSAVYSRRMEMFVP FT VLENERLIASAAYPKGLENKTLARKPGAEIAYQIVRYEAIRLVGGWNNPLLETAAKHMS FT LDKRKRLEVKGIDVTGFLDDWNNMSEFGGDLEGITLAEPLTNQTLIDINTPLESFDPKE FT RPETPRSPKKTLDEVTAAITSGTYKDPKSAVWRLLDQRTKLRVSTLRDQAAALRPASST FT VDNWAEATEELAAQQQLLMKANTLLKSSLTETREALETVQSDKIIAGKSNPEKNPGNAA FT NPVVGYGEFSEKIPLTPTQKKNAKRREKQRRNQ" XX SQ Sequence 2780 BP; 856 A; 795 C; 675 G; 454 T; 0 other; ggaaacagtg ggtcaacgtt ggtggcaccc gacataccac gactgtttac gtatgcacgc 60 aagtgcccct tttaaaacct ctacatttac aactcatgat atgtcggaca tattcaactc 120 accccagaac aaggcgtcaa tcttgagtgc tctcatgaaa agcacagcag gagatgtgga 180 agacgtgcta attccaaaac gcttccgacc agccaaggat ccccttgaca gtccacaagc 240 tgcagcacag ttcctaaagg acaacaagta ccgcatactt aggccgcgag ccattccaac 300 catggtcgaa ctagagacag atgccgctct gcctcgacta cgacagatgg tcgacgatgg 360 caagcttaag gacacggtaa gcgtcccaga aggaaccacc gcattctatc caaaatacta 420 cccattccac aagccagatc atgatgaagt tgggacgttt ggggctccag acgtcacact 480 tctgaaacaa ctcacattct tcctactgga aaatgacttt ccaacaggcc cagagacttt 540 acggcaagtc agagaagcca tagccacgct tcagtatggc tcaggcagct actcaggaca 600 gctaaacaga ctcctggcga tgaaaggggt tgcaactgga aggaatccaa acaaaactcc 660 caagacagtg ggctacagca atgagcagct ggccaaactc cttgagcaga cactaccgat 720 caaccctcca aagaacgagg acccagacct ccggtgggcc cccagctggt tgatcaacta 780 taccggagac cagagtaccg acaagtcata tctgccacat gtgactgtca agtcctcagc 840 cggcctacca tacataggca aaaccaaagg agacacgact gcagaagcgc tcgttctggc 900 tgactccttc ataagagacc tcggaaaagc cgcaacatca gctgatccag ggacagaagt 960 aaagaagacc ataacggact tctggtacct gagctgtggg ctgctattcc caaagggcga 1020 gagatacacc caagtggact gggacaagaa gacccggaac atatggagcg cgccctaccc 1080 aacacaccta ttgctatcaa tggtgtcatc accggtgatg gaggagtcca agctcaacat 1140 caccaacacc cagactccgt ccctgtacgg gttctctcca ttccatggcg ggatggacag 1200 aataatgacg atcataagaa atagtctgga cacaggagag gacctggtga tgatctacgc 1260 agacaacatc tacatactgc aagacgacac ctggtactca atcgacctag agaaaggtga 1320 ggccaactgc acaccacaac acatgcaggc catgatgtac tacctgctaa cgcgaggatg 1380 gacaaatgag gatggctcac cccgctacaa cccaacatgg gcgaccttcg ccatgaacgt 1440 tgcaccgtca atggttgtgg actcatcatg cctattgatg aacctgcagc tcaagacata 1500 cgggcaaggc agcggaaacg ccttcacctt tctcaacaac cacctaatgt caacaatcgt 1560 agttgccgag tgggtaaagg ccggaaaacc caaccccatg acaaaagagt tcatggacct 1620 cgaagagaag actgggataa acttcaagat tgagcgggaa ctcaagaacc tacgggaagt 1680 catcatggag gccgtcgaaa cagcacccca ggacggctac ctggccgatg gctcagacct 1740 cccaccacac aaacccggga gagccgtgga gctagaccta ctcggctggt ccgcggtata 1800 cagccgtcgg atggagatgt ttgtgccagt cctcgagaac gagcgactaa ttgcatcagc 1860 tgcctaccca aagggtctcg agaacaagac cctagccaga aaacccgggg ccgagatcgc 1920 ataccagata gtcaggtatg aagcgatccg cctggtaggc ggctggaaca atcccctgct 1980 agaaaccgca gcaaaacaca tgtccctaga caagagaaag cgtctagagg taaagggcat 2040 tgacgtcaca gggttcctgg atgactggaa caacatgtca gaattcgggg gtgacctcga 2100 agggataacc ctagctgaac ccctgacaaa ccaaaccctg atagacatca acacacccct 2160 tgagagcttc gacccaaaag agaggcccga aacacctcgg tcacccaaga agactctgga 2220 tgaagtaacc gctgccataa cctccgggac ttacaaggac cccaagagtg ccgtgtggag 2280 gctgctcgac cagaggacca agctaagagt aagcacgcta agagaccagg cagccgccct 2340 cagaccagca tcatccacag tggacaactg ggccgaagca acggaggaac tagcagcaca 2400 acaacagctt ctcatgaaag ccaacacgct gctcaagagc agtctcacag agaccagaga 2460 agcgctggag accgtccagt cagacaaaat catcgctgga aaatcgaacc ccgagaagaa 2520 ccccggcaac gcagccaacc ccgtggttgg ctacggcgaa ttcagcgaaa agattcctct 2580 aacacccacg cagaagaaga acgccaagcg aagggagaaa cagaggcgca accaataaga 2640 agacaaccgg gaagtatccg aaatgaccta gctggactca tatgcaagct ccgcgccgca 2700 cggcaggcta aacaaaagta gtgaccctga gagtgccacc aacatgaccc tagataacat 2760 ccggttccgc cagggacccc 2780 //