ID EU161285; SV 1; linear; genomic RNA; STD; VRL; 3091 BP. XX AC EU161285; XX DT 15-OCT-2007 (Rel. 93, Created) DT 29-MAY-2008 (Rel. 95, Last updated, Version 2) XX DE Paralichthys olivaceus birnavirus segment A, complete sequence. XX KW . XX OS Paralichthys olivaceus birnavirus OC Viruses; Riboviria; Birnaviridae; Aquabirnavirus. XX RN [1] RP 1-3091 RX DOI; 10.1007/s00705-008-0075-0. RX PUBMED; 18398563. RA Zhao Z., Ke F., Li Z., Gui J., Zhang Q.; RT "Isolation, characterization and genome sequence of a birnavirus strain RT from flounder Paralichthys olivaceus in China"; RL Arch. Virol. 153(6):1143-1148(2008). XX RN [2] RP 1-3091 RA Zhao Z., Ke F., Zhang Q.Y.; RT ; RL Submitted (18-SEP-2007) to the INSDC. RL State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of RL Hydrobiology, Chinese Academy of Sciences, 7 Donghu South Road, Wuhan, RL Hubei 430072, China XX DR MD5; c21d5513772f623610b989390cc37ee6. XX FH Key Location/Qualifiers FH FT source 1..3091 FT /organism="Paralichthys olivaceus birnavirus" FT /segment="A" FT /host="Paralichthys olivaceus (Japanese flounder)" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:475879" FT gene 112..513 FT /gene="VP5" FT CDS 112..513 FT /codon_start=1 FT /gene="VP5" FT /product="nonstructural protein" FT /note="similar to Bcl-2" FT /db_xref="InterPro:IPR004284" FT /db_xref="UniProtKB/TrEMBL:A8IFA1" FT /protein_id="ABW07820.1" FT /translation="MNHEHNKGNRNLLEIHYASREWSSKHSGRHNRETHTKTRDLVIQL FT RGLRLRKWASCLLPWSSWIQSRCPLQVESEPDGTGIRPVAGNITGPEEGIQLREAGLTE FT IRRPELNFTCWSVCPEWDPERRDLRRKSV" FT CDS 119..3037 FT /codon_start=1 FT /product="polyprotein" FT /note="contains major structural protein 2 (VP2), FT non-structural protein (VP4), and minor structural protein FT 3 (VP3)" FT /db_xref="GOA:A8IFA7" FT /db_xref="InterPro:IPR002662" FT /db_xref="InterPro:IPR002663" FT /db_xref="InterPro:IPR025775" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:A8IFA7" FT /protein_id="ABW07821.1" FT /translation="MNTTKATATYLRSIMLPENGPASIPDDITERHILKQETSSYNLEV FT SDSGSGLLVCFPGAPGSRVGAHYKWNQNQTELEFDQWLETSQDLKKAFNYGRLVSRKYD FT VQSSTLPAGLYALNGTLNAATFEGSLSEVESFSYNSLTSLTTNPQDKVNNQPVTKGVTV FT LNLPTGFDKPYVRLEDETPQGPQSTNGARMRCTAAIAPRRYEIDLPSARLPTVPATGTL FT TTIYEGNADIVNSTTVIGDISFRLEQDPPNDTKYDFQLDFLGLDNNVPVVSITSSTLAT FT TDNYRGVSVKFTQSIPTETITKPITRVKLSYKINQQTAIGNAATLGPLGPSSVSFSSGN FT GNVPGVLRPITLVAYEKMTPQSILTVAGVSNYELIPNPELLKNMVTKYGKYDPEGLNYA FT KMILSHREELDIRTVWRTEEYKERTRAFNEITDFSSDLPTSKAWGWRDIVRGIRKVAAP FT VLSTLFPMAAPLIGAADQFIGDLTKTNAAGGRYLTHAAGGRYTDVMDSWASGSDTGRFS FT RNLKDRLESNNYEEIELPPPTKGVIIPVVHTVESAPGEAFGSLLVIIPGAYPELLDPNQ FT QVLSHFKNDTGCVWGIREDIPFEGDDICYTALPLKEIKKNGNIVVEKVFAGPAMGPSCQ FT LGLSLLVNDIDKGVPRMVFTGEIADDEETIVPICGVNIKAIAAHEHGLPLVGCQPGVDE FT VVANTSLASHLIQSGALPVQKTQGASRRIKYLGELMRTTASGMDEELQKLLHATMARAK FT EVKDAEVFKLLKLMSWTRKNGLTDHMYEWSKEDPEAVKFGKLISTPPKHQEKPKGPDQH FT TAQEAKAVRISLDAVKAGADFASPDWIAENRYRGPSPGQFKYYVITGSVPDPRDEYDDY FT VRKPITRPTDMDKIRRLANSVYGLPHQEPAPEEFYQAVVEIFAENGGRGPDQEQMQDLR FT DLARQMKRRPRPAETRRQNRAPPRAAPSGSSRFTPSGDNGEV" XX SQ Sequence 3091 BP; 913 A; 906 C; 763 G; 509 T; 0 other; ggaaagagtg tttcaacgtt agtggtaacc cacgagcgga gagctcctac ggaggagctc 60 tccgtcgatg gcgaaagccc tttctaacaa acaacctaca attctatcta catgaatcat 120 gaacacaaca aaggcaaccg caacttactt gagatccatt atgcttcccg agaatggtcc 180 agcaagcatt ccggacgaca taacagagag acacatacta aaacaagaga cctcgtcata 240 caacttagag gtctcagact ccggaagtgg gcttcttgtc tgcttccctg gagctcctgg 300 atccagagtc ggtgcccact acaagtggaa tcagaaccag acggaactgg aattcgacca 360 gtggctggaa acatcacagg acctgaagaa ggcattcaac tacgggaggc tggtctcacg 420 gaaatacgac gtccagagct caactttacc tgctggtctg tatgccctga atgggaccct 480 gaacgccgcg accttcgaag gaagtctgtc tgaagtggag agtttctcct acaacagtct 540 gacgtccctc accacgaacc cccaggacaa agtgaacaac cagccagtca ccaaaggagt 600 gacagtccta aacctaccaa cagggttcga caagccatac gtccgcctgg aggacgagac 660 cccacaaggg ccccagtcaa cgaacggcgc ccggatgagg tgcacagctg caattgcacc 720 acgaaggtat gaaattgacc tcccatccgc acgcctcccc acagtaccag cgactgggac 780 cctcacaaca atctatgaag ggaacgccga cattgtgaac tcaaccacag tgatcggcga 840 catcagcttc agactggaac aagacccccc gaacgacacg aagtacgact tccagctcga 900 cttcctaggc ttagacaaca acgtccccgt tgtgtcaata accagctcta cgctggccac 960 aaccgacaac tacagggggg tctcagtcaa attcacacag tcaatcccaa cagagacaat 1020 cacaaaaccc atcaccaggg tcaagctgtc ctacaaaatc aaccagcaga cagccatcgg 1080 caatgcagca acgcttggac ccctggggcc ctcatccgtc tcattctcat caggaaacgg 1140 aaacgtacct ggagtgctca ggccaataac cctagtggcc tacgagaaga tgacacccca 1200 gtcgatcctg acggtagctg gagtgtcaaa ctatgagctg atcccaaacc ccgaactcct 1260 gaagaacatg gtcacgaaat atggcaagta tgaccccgaa ggtctcaact acgccaagat 1320 gatcctgtcc caccgagagg agctagacat cagaacagtc tggagaaccg aggagtacaa 1380 ggagagaaca agagccttca atgagatcac agacttctca agtgacctcc caacctcaaa 1440 agcctggggg tggagagaca ttgtgagagg catccggaag gtggcagcac cagtgctgtc 1500 aacactcttc cccatggcgg caccactcat cggagctgcc gaccaattca tcggggacct 1560 gaccaagacc aacgcagccg gaggccgcta cctaacacat gcagcaggag gacgctacac 1620 tgacgtaatg gactcctggg ccagcggctc agacactggg aggttctcac gcaacctcaa 1680 agaccggctg gagtcaaaca actatgagga gatagaactt cctccaccaa cgaaaggagt 1740 catcatacct gtggtgcaca cagtggagag tgcacctggt gaggcctttg ggtcccttct 1800 ggtaatcatc ccaggagcat acccagaact tcttgaccca aaccagcagg tcctgtccca 1860 cttcaaaaat gacactggat gtgtctgggg catacgagaa gacattccat tcgaaggtga 1920 cgacatatgc tacaccgccc tgcctctcaa agagatcaag aagaacggaa acatcgtagt 1980 ggagaaagtc ttcgctggcc ctgcgatggg accatcctgc caactgggcc tgtcgctcct 2040 tgtcaacgac atcgacaagg gcgtacccag aatggtgttc actggagaga tcgcagacga 2100 cgaggaaacc atcgtcccca tctgcggtgt aaacatcaaa gccatcgccg cccatgaaca 2160 tgggctgcca ctcgttggct gtcaaccagg agtcgatgag gtggtggcaa acacatctct 2220 cgcctcacac ctgatccaga gcggagcact accagtgcag aaaacacaag gcgccagcag 2280 gaggatcaag tacctggggg aactaatgag aacaactgca tcagggatgg acgaagagct 2340 gcagaagctg ctgcacgcca ccatggccag agcaaaagag gtgaaagacg ccgaagtctt 2400 caaacttctc aagctgatgt cctggaccag gaagaacggg ctcaccgacc acatgtatga 2460 atggtcaaaa gaggaccctg aagcagtcaa atttggcaaa ctcatcagca caccaccaaa 2520 acaccaagag aagccaaaag gacccgacca gcacacggca caggaggcga aagctgtccg 2580 gatctcacta gatgcagtga aggcaggagc agactttgcc tccccagact ggatcgcgga 2640 gaatagatac cgcggtccat caccaggcca gttcaagtac tacgtcatca cagggagcgt 2700 cccagaccca cgagacgagt acgatgacta cgtgcgaaaa ccaataacaa gacccacgga 2760 catggacaaa atcagacgcc tagccaacag tgtctacgga cttccccacc aagaacctgc 2820 accagaggaa ttctaccaag cggtagtcga gatcttcgca gaaaatggag gacgaggacc 2880 agaccaagaa cagatgcaag acctgaggga cttggcccgg cagatgaaac gacgaccccg 2940 accagctgag acacgcaggc aaaaccgagc tccaccacgg gcggcaccca gtggaagctc 3000 acgttttacc ccctccggag ataacggaga agtgtaacag ctactctctt tcctgactga 3060 tcccctggcc tcaaccccgt cccccagggg g 3091 //