ID EU159528; SV 2; linear; genomic RNA; STD; VRL; 3358 BP. XX AC EU159528; XX DT 06-OCT-2007 (Rel. 93, Created) DT 28-DEC-2007 (Rel. 94, Last updated, Version 2) XX DE Cucumber mosaic virus isolate Lucknow 1a protein gene, complete cds. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3358 RA Raj S.K., Vishnoi R., Kumar S., Pratap D.; RT ; RL Submitted (13-SEP-2007) to the INSDC. RL Molecular Virology, National Botanical Research Institute, Rana Pratap RL Marg, Lucknow, UP 226 001, India XX RN [2] RC Sequence update by submitter RP 1-3358 RA Raj S.K., Vishnoi R., Kumar S., Pratap D.; RT ; RL Submitted (27-DEC-2007) to the INSDC. RL Molecular Virology, National Botanical Research Institute, Rana Pratap RL Marg, Lucknow, UP 226 001, India XX DR MD5; 23625f2c7cd3b6c1485a10278f3158ad. DR RFAM; RF01084; TLS-PK3. XX CC On Dec 27, 2007 this sequence version replaced gi:157783562. XX FH Key Location/Qualifiers FH FT source 1..3358 FT /organism="Cucumber mosaic virus" FT /segment="RNA1" FT /host="banana" FT /lab_host="Nicotiana tabacum cv. White Burley" FT /strain="CMV-Ban:Radha" FT /isolate="Lucknow" FT /mol_type="genomic RNA" FT /country="India" FT /db_xref="taxon:12305" FT CDS 96..3077 FT /codon_start=1 FT /product="1a protein" FT /db_xref="GOA:A8IEE7" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR021002" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:A8IEE7" FT /protein_id="ABV72581.2" FT /translation="MATSSFNINELVASHGDKGLLATALVDKTAHEQLEEQLQHLRRGR FT KVYIRNVLSVKDSEVIRNRYGGRYNLHLTQQEFAPHGLAGALRLCETLGCLDSCPSSGL FT RQDLFLDFGGSCVTHYLRGHNLHCCSPCLGIRDKMRHAERLMNMRKIILNDPQQFDGRQ FT PDFCTHPAADCEVQAHFAISIHGGYDMGFRGLCEAMNAHGTTILKGTMMFDGAMMFDDQ FT GVIPELNCQWRKIRSAFSETEDVTPLSEKINSTGFTGVRKFKTMVAFDFINESTMSYVH FT SWENIKSFMTDQTYSYKGMTYGIERCVINAGIMTYKIIGVPGMCPPELIRHCIWFPSIK FT DYVGLKIPASSDLVKWKTVRILTSTLRETEEIAMRCYNDKKAWMEQFKVILGVLSAKSS FT TIVINGMSMQSGERIDIEDYHYIGFAILLHTKMKYEQLGKMYDMWNASVIWKFFAALTR FT PLRVFFSSVVRVLFPTLRPREEKEFLIKLSTFVTFNEECSFDGGEEWDVISSAAFVAAQ FT AVTDGKSLAAQKAEKLAEKLAQPVIEVSDSPETSSPTSDDTDDVCGKEQEVSELDSLSA FT QTRSPITRVAERATAMLEYAAYEKQLHDTTVSNLKRIWNMAGGDDKRNSLEGNLKFVFD FT TYFTVDPMVNVHFSTGRWMRPVPEGVVYSVGFNERGLGPKSEGELYIVNSECVVCNSES FT LSSITRSLQAPTGTISQVDGVAGCGKTTAIKSIFEPTTDMIVTANKKSAQDVRMALFQS FT SDSKEACTFVRTADSVLLNECPAVSRVLVDEVVLLHFGQLCAVMSKLEAVRAICFGDSE FT QIAFSSPDASFDKPFLTLIPDESSDADTTFRSPQDVAPLVPMKATKALPKGTHSKYTRW FT VSQSKVKRSVTSRAAESVTMVNLDSSRFYVTMTQADKASLISRAKEMNLPKTFWNERIK FT TVHESQGISEDHVTLVRLKSTKCDLFKKFSYCLVALTRHKVTFRYEYCGMLGGDLIAEC FT IARA" XX SQ Sequence 3358 BP; 852 A; 760 C; 810 G; 936 T; 0 other; gttttattta caagagcgta cggttcaacc cctgcctcct ctgtaaaatt accctttgaa 60 aacctctctc ttctaatctt ttctttgcaa ttcctatggc gacgtcctcg ttcaacatca 120 atgaactggt agcctcccac ggcgataaag gattactcgc gaccgccctc gttgataaga 180 cagctcatga gcagctcgag gagcaattac aacatctacg tcggggccgt aaggtctaca 240 ttcggaacgt tctgagtgta aaggattccg aagtcatccg gaatcggtat ggagggaggt 300 acaacctcca tcttacccag caggagtttg ctccccacgg cctagctggt gccctccgct 360 tgtgtgaaac tctcggttgt ctagactcct gcccttcatc aggtctgcgg caagacctct 420 tcttagactt cggaggaagt tgcgtcacac attacctccg cggacataac ctacactgct 480 gttccccttg tttgggtatc cgcgataaaa tgcgccacgc ggaacgttta atgaacatgc 540 gcaagatcat cctgaacgat ccacaacagt tcgatggtcg acagccggat ttctgcactc 600 atcctgctgc tgattgcgaa gtacaagccc acttcgctat atctattcat ggaggttatg 660 atatgggctt tagaggacta tgtgaagcga tgaacgctca cggaaccact atcttgaagg 720 gaacgatgat gttcgatggt gcgatgatgt ttgacgacca aggtgtgata cccgagctta 780 attgtcagtg gaggaagatt aggagtgctt tctccgaaac tgaagacgtt acgccgttgt 840 ctgagaaaat taattctaca ggattcaccg gtgtgcgtaa gtttaagact atggtagctt 900 ttgattttat caatgagtct accatgtctt acgtccattc ttgggagaat ataaagtctt 960 ttatgactga ccagacatac tcgtataaag ggatgactta tggcatcgaa cgttgtgtca 1020 ttaatgcggg tattatgacg tataaaatca tcggtgtgcc tgggatgtgt ccacccgaac 1080 tcattcggca ttgcatttgg ttcccctcta ttaaagacta tgttggtcta aagattcccg 1140 cgtcgtcgga cttggttaag tggaaaacag tgcggatttt aacgtcaaca ttacgtgaaa 1200 ctgaagagat tgctatgagg tgttataatg ataagaaagc gtggatggaa caatttaagg 1260 tcattttagg tgttctttcc gctaagtctt ctaccattgt tatcaatggt atgtccatgc 1320 aatctggcga acgaatagat attgaagact atcattatat aggattcgcc attcttcttc 1380 acacaaaaat gaagtacgaa caactaggga aaatgtatga tatgtggaac gcttcagtta 1440 tctggaagtt tttcgcagcg ttgactcgtc cgctgcgtgt atttttctct agtgttgttc 1500 gcgtgctgtt cccgactttg agaccccgcg aggaaaagga attcctgatc aagctctcca 1560 ccttcgttac ttttaatgaa gagtgctcat ttgacggtgg agaggaatgg gacgtgatat 1620 catctgctgc atttgttgcc gcgcaggctg ttaccgatgg gaaatctttg gctgcgcaga 1680 aagccgagaa gctcgctgag aagcttgcac aacccgtgat tgaggtatcg gacagtcctg 1740 agacgtcatc tccaacgtct gatgatactg atgatgtttg tggaaaggag caagaggttt 1800 cggaacttga ctccttgtca gctcagacac gttcccccat cactagagtc gctgaaaggg 1860 ctactgctat gttagagtat gccgcttatg agaagcaatt acacgacacc acggtgtcta 1920 atttgaaacg catttggaac atggcgggtg gtgatgataa gagaaactcc ctcgagggca 1980 atttgaaatt tgtcttcgac acgtacttca ccgtcgaccc tatggtgaac gttcactttt 2040 ccacgggccg gtggatgcgt ccagtaccgg agggagttgt gtactctgtt ggtttcaatg 2100 agcgtggctt aggcccgaaa tctgaaggag agctttatat tgtcaatagt gagtgtgtag 2160 tctgtaacag tgaatctctg tcttccatca cacgctcgtt acaagctcca actggaacca 2220 tcagtcaagt cgatggggtc gcaggctgtg ggaaaactac agcaattaaa tctatatttg 2280 aaccgaccac cgacatgatc gtcaccgcga acaaaaaatc cgctcaagat gtgcgtatgg 2340 cacttttcca atcgtcggat tccaaagaag cctgcacctt cgtccgaaca gccgattctg 2400 tcttgcttaa tgaatgtcca gctgttagca gagtcttggt tgatgaagtt gtgttgctgc 2460 actttggtca gttatgtgcc gttatgtcaa aactggaggc cgtgagagcc atatgtttcg 2520 gggattcaga gcagattgct ttttcctctc cagatgcctc ctttgacaag ccttttttaa 2580 ccctaattcc tgatgagagt agtgatgcgg acactacctt ccgtagccca caagatgtcg 2640 cgccgcttgt gcctatgaag gctacgaagg cccttccgaa aggaactcat tcgaaataca 2700 ccagatgggt ttctcaatct aaagtgaaga gatctgttac atctcgtgct gccgaaagtg 2760 tgaccatggt taatcttgac tcttctagat tttatgtcac gatgacacaa gctgataaag 2820 cttcactgat ttcaagggcg aaagagatga acttaccaaa aactttctgg aatgaaagaa 2880 tcaaaaccgt gcatgagtcc caaggcattt ctgaggacca cgtcactttg gtaagattga 2940 agagcacgaa gtgtgacctg ttcaaaaaat tttcttattg tcttgtcgct ttgaccagac 3000 acaaggtcac tttccgctac gagtattgtg gtatgttagg cggcgattta attgccgaat 3060 gtattgctcg tgcttagcgg tacccctccc tcgggcggga tctgagttgg cggtaatcta 3120 caaaccgtct gaagtcacta aacgcattgc ggtgaacggg ttgtccatcc agcttacggc 3180 taaaatggtc agtcgtggag aaatccacgc cagcagactt acaagtctct gaggtgcctt 3240 tgaaaccatc tcctaggttt cttcggaagg acttcggtcc gtgtacttct agcacaagat 3300 gctagtttca gggtacgggc acccccccat ttcaatgggg gtctccaaaa ggagacca 3358 //