ID EU158250; SV 1; linear; genomic RNA; STD; VRL; 5862 BP. XX AC EU158250; XX DT 30-AUG-2008 (Rel. 97, Created) DT 30-AUG-2008 (Rel. 97, Last updated, Version 1) XX DE Mikania micrantha wilt virus segment RNA1, complete sequence. XX KW . XX OS Mikania micrantha mosaic virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Fabavirus. XX RN [1] RP 1-5862 RX DOI; 10.1007/s00705-008-0180-0. RX PUBMED; 18679764. RA Wang R.L., Ding L.W., Sun Q.Y., Li J., Xu Z.F., Peng S.L.; RT "Genome sequence and characterization of a new virus infecting Mikania RT micrantha H.B.K"; RL Arch. Virol. 153(9):1765-1770(2008). XX RN [2] RP 1-5862 RA Wang R.L., Ding L.W., Sun Q.Y., Xu Z.F., Peng S.L.; RT ; RL Submitted (16-SEP-2007) to the INSDC. RL State Key Laboratory of Biocontrol, Sun Yat-Sen University, 135 Xin-Gang RL West Road, Guangzhou, Guangdong 510275, China XX DR MD5; 8956c3b816b9eaf7131d6ded83290bf7. XX FH Key Location/Qualifiers FH FT source 1..5862 FT /organism="Mikania micrantha mosaic virus" FT /segment="RNA1" FT /isolate="GZ1" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:487492" FT CDS 178..5739 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:B5L2C4" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR004004" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="UniProtKB/TrEMBL:B5L2C4" FT /protein_id="ABX83032.1" FT /translation="MASELASVCVGFLRCSMGLQSTKDFVEREFAGNPLKDLIYMHLCF FT FDANSMAIDYNAGLNNAQMFSAQAVRARFAILKAHAYGNVLTGKYDKNKMLEYNHETCT FT NWFDCDFVMDSRDGNENLATSSDAEVFPPSKVTSLDTQAMVGQSIISSVQRAASIILEK FT CAKFTTKTLENFLICLKDAIRGAFASWMPNIEQAFSWFGNIFEVLKRWASSIHDGISGL FT LVGIEECLYMGVAIVSSTCIVALIEKFLVATKMIASPCNAPSLFLAGITAAVGSTYLFT FT KGVEKSSIISDMMEFVSLSCGKLLNVAFGADLKGKIPQSEGQFGPSIVLESLAATMESW FT STKSLNEVGRSFGAITQIKNGAVAMRDIVTYLFTSLGEIGSKVLGFESQVLSDLSILLG FT ENVADWLDECDCMIAFMLEFTSNAREIFDRLAQLIEKGRSIRAGLLKTVHRGSPQVMAL FT VTKALEKLTELHNSVVMAGSNGSRRAPFMVFFTGSSGVGKTSVVQRMGANWLQQEQLGS FT NEIYARNGQDPFWSGYRRQAVVTYDDFGAVPGLISNEAEIINVVSRNPHAVNMADLKEK FT GMYFDSRLIIASSNFLAANPESGVHDSEAYERRRHCVIKVTLKNGVPYNPSDPCGNQEY FT TLLDSRSPFHALQTFESYEELWSFVYNRFKEHEEAEQIFLSSLPVPEGTEAEALKNLVG FT ISVAIGSIGPSAVMKYAATHLPGHHFLISDGDIVYFWLENGMVTRVNIKNLGLSNLEKA FT ELQQRSLACALTYQNLSKLFPTLNPLAVLYAKNIVKKGWVLENLTVSPTCTDEFMRGQI FT AHLPEWQKAYLYVLGKHLQDSGDKGWFRNCLEETKKALRSSYVWEYKKWPFAMKLAVGT FT LIAIFGGTVVYAMLQSLWGCAGEASFVVGAAALFSEGCKLDAQSLPPNKAAGEYLFRNK FT KVRVRNWEGQAPCFGDTAGWIADNCMATLNVFGNRIQVCLMPNRGFLIVNHFAEAIPSG FT SMVHLESSLSSTYFVWEKKKLTLFEGNELALYVAPVIPKMVDSFQTRVVYDAESLPDSF FT KATFFSYKYDAVLQQMVPEIGEIMCKKKSQVMTVCSGEYRRKVPLHLQYENNTIKGDCG FT SLIMVELEGKMKLVAVHVAGTGQLASACFIPFDERFTQTTGQSAFVMNYTEWASPEILG FT PGCRVIGAISKEHQVSVGGKTGFVETPESWHLNTPCDKLPSVLGRNDPRLAGTMNADYD FT PFSVGMTKYAKEAGPFDADTLVAVCEEIKETWYDARGDFTFEEVSLEVALNGVANLEYF FT DAIVLSTSEGYPYRLERNPGDKGKARYVEGDAGDYTISDKQMLEDITWFEEESKMRVPD FT LYCIECVKDERLPKRKVLEKPKSRLFTVLPMSYNLVIRKKFLNFVRFFMTRRDVLPCQV FT GVNPYSREWSRIACKLLEKGNNILCCDYSRFDGFLPKCIMLKIGQLIGSFMGKNDEEVT FT QICNLLLACTGRYAICEKLLYRVENGIPSGFPLTVIVNSILNEILVKYAYRMCFADNPM FT IRESFDTHVALVVYGDDNLISVSDAISSKFNGEFLVDFFLRLSITVTDGVDKTKQGISF FT RKLTDCDFLKRNFKVLPDGEWVGPMSRESLWPQLHFVRAKKLEMADAYVANLNNILREL FT WLHGSEEVTELRRMAVKTLKWLEPSRLLTLGQIAEFYEEQRNGDCSFLAACNATENLDL FT LDPLIPGQLPVATQQILPGVVVAAEKHYVENLDEYFVISLSTLRKFKSPEDGMVISFPY FT GCGRGGLPTQQFMLENVIRKGCNIRKNFERALSEFNKKPKGVIVISQSSVIPAYVFTIL FT LLAATGKINRVVSNVALTRPMQICKNLKSLPENFPDFF" FT mat_peptide 1492..1716 FT /product="signal recognition particle GTPase" FT mat_peptide 1729..1893 FT /product="RNA helicase" FT mat_peptide 3094..3564 FT /product="C3 protease" FT mat_peptide 3733..5154 FT /product="RNA-dependent RNA polymerase" XX SQ Sequence 5862 BP; 1667 A; 974 C; 1403 G; 1818 T; 0 other; gtttaaatta aatatttgaa caaacagctt tcgtcgaatc aaaactgctt tcggttacga 60 attctcttct tttctgaaat cctctaacaa acagctttct tgaaacgtct tctgctttca 120 ttctcaactt taaattttct tcaattctcg atccattttg ctctcataaa ctttgaaatg 180 gcttctgaat tggcttccgt gtgcgttggt ttcctacgat gctccatggg tttacaatcc 240 actaaggatt ttgtggaaag agaatttgct gggaatcctt tgaaagattt aatctatatg 300 catttgtgtt tctttgatgc caacagcatg gcaattgact ataatgctgg acttaataat 360 gctcaaatgt tttccgcaca agctgtgcga gcaagatttg cgatattaaa agcacatgct 420 tatggcaatg tgcttactgg caaatatgat aaaaacaaga tgctagaata caatcatgaa 480 acctgcacaa attggtttga ttgtgatttt gtaatggatt ccagggatgg aaatgaaaat 540 ctagcaactt cttctgatgc tgaagtattt ccacctagta aagtcacttc tttggacact 600 caagctatgg ttgggcaaag catcatctca agtgtgcaac gcgcggcatc tatcatcctt 660 gagaagtgcg ccaaatttac cacaaaaaca cttgagaatt ttttgatttg tttgaaagac 720 gctattcgtg gcgcatttgc ttcttggatg ccaaatatag aacaagcctt ttcttggttt 780 ggaaatatct ttgaagtgtt gaagagatgg gcttcttcta ttcatgatgg cataagtggt 840 cttttagtgg gcattgaaga gtgcctatat atgggggttg ccattgtctc atctacttgc 900 attgttgcac tcatcgaaaa atttttagtt gcaacaaaaa tgatagcgag tccatgcaat 960 gctccttctt tatttcttgc tgggattact gctgcagttg ggtcgactta ccttttcact 1020 aaaggtgtgg agaaatcgtc cataatttct gatatgatgg agtttgtatc cctatcgtgt 1080 ggaaaattgc tgaacgtggc atttggggct gatcttaagg gcaagattcc gcagagtgaa 1140 gggcaatttg gaccaagtat cgtcttggaa agcttggcag caactatgga atcatggtct 1200 acaaaatccc tgaatgaggt tggccgatct tttggtgcta tcacgcaaat taaaaatgga 1260 gctgtggcta tgcgagacat agtgacatat ctcttcacat ctttgggaga gattggtagc 1320 aaagttcttg gttttgagtc tcaggtatta tctgacttat cgattttgct tggggaaaat 1380 gttgcagact ggcttgacga gtgcgattgc atgatagcct ttatgttaga attcacttct 1440 aacgctaggg agatttttga tcgtttagca cagctcattg agaaagggag gtctatccga 1500 gcaggcctgc ttaagacagt tcataggggt tcaccacaag ttatggcatt agtcacaaag 1560 gctttggaga aactaacaga attgcacaat tctgtggtga tggcaggatc aaatggatcc 1620 cgtagagcgc cttttatggt gttttttacg ggatcttctg gagtaggaaa gacatcagtt 1680 gtacaaagga tgggagctaa ttggctgcaa caagagcaat taggctcaaa tgaaatttac 1740 gctaggaatg gacaagatcc cttctggtct ggttacagaa ggcaagcagt tgttacatat 1800 gatgattttg gagcagtgcc tggtttaatt tcaaatgaag ctgagataat taatgtggtt 1860 tctagaaatc ctcatgcagt gaatatggca gatttgaagg agaaaggtat gtattttgac 1920 tccagattaa taattgcgag cagtaacttt cttgctgcca accctgagtc aggagtgcat 1980 gattctgaag cttatgagag aagaaggcat tgtgttatca aggttacatt aaagaatgga 2040 gtgccttata acccttcaga tccttgtggt aaccaagagt acactttgtt ggattctaga 2100 tctccttttc acgcgctaca aacttttgaa agttatgagg aactttggtc attcgtttac 2160 aacagattca aagaacatga agaggctgag caaatatttt tgtcgtcttt gcctgtgcca 2220 gagggaactg aggcagaagc gcttaaaaat ctggttggga taagcgttgc tataggatct 2280 atagggccct ctgccgtgat gaagtacgct gcaacacatt tgccagggca tcattttttg 2340 atatcagatg gagatatagt atacttctgg ctagaaaatg gaatggttac tcgcgtaaat 2400 atcaaaaatc ttgggttgtc taatcttgag aaggctgagt tgcaacaacg tagtttggct 2460 tgtgctttga catatcagaa tttgtccaaa ttgtttccga cgttaaatcc tttggcggtt 2520 ctttatgcta agaatattgt gaagaagggt tgggtccttg aaaatcttac tgtctcccca 2580 acttgcacag atgaatttat gcgtggccaa attgcgcact tgccagagtg gcaaaaagct 2640 tacttgtatg tacttgggaa acatctgcaa gattctgggg acaagggttg gtttcgaaat 2700 tgccttgagg aaacaaagaa ggcccttcgc tcatcctatg tgtgggagta caagaaatgg 2760 ccatttgcaa tgaaattggc agtgggtaca ttaattgcta tctttggagg aactgtagtt 2820 tacgcaatgc tgcaaagttt gtggggttgt gcaggagaag cttcatttgt tgttggtgca 2880 gctgcattgt tttctgaagg ctgcaagctg gatgcacaaa gtttgcctcc aaataaggct 2940 gctggggaat atctctttcg gaacaagaaa gtacgtgtga ggaattggga aggtcaagcc 3000 ccgtgttttg gagatactgc tgggtggatt gctgacaatt gcatggccac attaaatgta 3060 tttggaaatc ggatccaagt ttgtctcatg ccaaataggg gttttcttat tgtaaatcat 3120 ttcgcagaag caatcccaag tgggtcaatg gtgcatttgg agtcaagtct gtcaagcaca 3180 tattttgttt gggagaagaa aaaattgaca ctttttgaag gaaatgaatt agccttgtac 3240 gtggctccag taatccctaa gatggttgat tctttccaga ccagagtagt ttatgacgcc 3300 gagtcgttgc ctgatagttt taaggcaacc ttcttttctt acaaatatga tgcagtgctg 3360 cagcaaatgg tgccagagat tggcgagatt atgtgcaaga agaagagcca agttatgaca 3420 gtgtgctctg gggaatatcg caggaaagtt ccgttgcatt tgcagtatga gaacaacact 3480 atcaaaggag attgtggatc tttaattatg gtggaattag aaggaaaaat gaaattggtt 3540 gctgttcatg ttgctggtac gggccagttg gcatcagctt gctttattcc tttcgatgag 3600 agattcaccc aaactactgg tcagagtgca tttgtcatga actacactga gtgggcctcc 3660 cctgagattt tgggacctgg ttgtcgtgtg attggagcaa tatcaaaaga acaccaggtc 3720 tctgtaggag gaaaaacggg ttttgtggaa acacctgaat cctggcattt gaacacgcct 3780 tgcgataaat tgcctagtgt tttggggaga aatgacccgc gactggctgg aactatgaat 3840 gctgactatg acccattttc agtcggaatg acaaagtacg caaaagaagc aggtccattt 3900 gacgctgata ctttggtggc agtttgtgag gaaatcaaag aaacttggta tgatgcaaga 3960 ggcgatttta catttgagga agtctcactt gaagttgcgc tgaatggagt tgcaaacttg 4020 gagtattttg atgccattgt tctgagtact tctgaaggct atccataccg attggaacgt 4080 aatcctgggg ataaaggaaa agcacgttac gtggaagggg acgctggaga ctacacaata 4140 tcggacaagc aaatgctgga agatatcact tggtttgaag aggaaagtaa gatgcgtgtt 4200 cccgatttgt attgcataga atgtgtcaaa gatgaaaggt tgcccaagag gaaggtgctg 4260 gaaaagccca agagtagatt gtttacagtg ctacccatgt cttacaatct tgtaattaga 4320 aagaagtttt tgaattttgt tagatttttc atgacaagaa gggatgtgtt gccatgtcaa 4380 gttggagtga atccatactc tcgggaatgg agtcgcattg cttgcaagtt acttgagaag 4440 ggcaataata ttttatgttg tgattatagt agatttgatg gctttttgcc taaatgcata 4500 atgctcaaaa ttggccaatt aattggctcg ttcatgggga agaatgacga ggaagtgaca 4560 caaatttgca atttattgtt ggcttgtaca gggcgttatg ccatatgtga gaaattgctt 4620 tatagggtag aaaatggcat accttctggg tttcctttga cagtcattgt aaattccatt 4680 ctgaatgaaa tacttgttaa atacgcgtat aggatgtgct ttgccgataa tcctatgatt 4740 agggaaagtt ttgatactca cgttgcttta gttgtgtatg gagatgataa tttaatatct 4800 gtctctgatg caatctcttc taagttcaat ggtgaatttc ttgttgattt tttccttaga 4860 ttgtccatta ccgtaacaga tggagttgat aagacaaaac aggggatttc ttttcgcaaa 4920 ttgacagatt gtgatttttt gaagaggaac ttcaaggtgc ttccagatgg tgagtgggta 4980 gggcctatgt cgagagaaag tttgtggccg caattacatt ttgtgcgagc taagaaattg 5040 gagatggcag atgcttatgt tgcaaatctt aataacattc tgcgagaatt gtggctccat 5100 ggatctgaag aagtaactga gttgcgaaga atggctgtta aaaccctgaa atggctggag 5160 ccaagtagat tgctgacact tgggcagatt gcagagtttt atgaagagca gagaaacgga 5220 gactgctcct tcctggcagc gtgcaatgct actgaaaatc tagatctgct ggatccatta 5280 attccaggac aactccccgt tgcaacacag caaattttgc ctggtgttgt tgttgcagca 5340 gaaaagcatt acgtcgagaa tttagatgag tactttgtca tttcgctctc aactttgagg 5400 aaatttaagt cacctgaaga tggtatggtt atatcttttc cgtatggttg tggcagaggt 5460 gggctgccaa cacaacaatt tatgctggag aatgtcattc gaaaaggttg caatattaga 5520 aagaattttg agagagctct ctctgaattc aataagaagc caaaaggtgt aattgtgata 5580 tctcagagct cagtgatacc cgcgtatgtc ttcacaatac ttttgctagc tgctactggg 5640 aaaataaatc gtgttgtgag taatgtggct cttactagac caatgcaaat ttgcaagaat 5700 cttaagtccc ttccagaaaa ctttccagat ttcttttaag tatttgtgtg ctttactatt 5760 tgtataatat aaaataaacc ataaagtgtg cgctatgctt ttgttttaat ttaaaagtgg 5820 tttgtatttt tatatcaaaa aaaaaaaaaa aaaaaaaaaa aa 5862 //