ID EU152260; SV 1; circular; genomic DNA; STD; VRL; 2686 BP. XX AC EU152260; XX DT 08-APR-2008 (Rel. 95, Created) DT 08-APR-2008 (Rel. 95, Last updated, Version 1) XX DE Maize streak virus isolate MSV-SWyl, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2686 RX DOI; 10.1016/j.jviromet.2007.12.014. RX PUBMED; 18280590. RA Shepherd D.N., Martin D.P., Lefeuvre P., Monjane A.L., Owor B.E., RA Rybicki E.P., Varsani A.; RT "A protocol for the rapid isolation of full geminivirus genomes from dried RT plant tissue"; RL J. Virol. Methods 149(1):97-102(2008). XX RN [2] RP 1-2686 RA Varsani A., Monjane A., Shepherd D., Owor B., Rybicki E., Martin D.; RT ; RL Submitted (12-SEP-2007) to the INSDC. RL Electron Microscope Unit, University of Cape Town, University Ave, RL Rondebosch, Cape Town, WP 7701, South Africa XX DR MD5; 08ec3b6821c96fcf7659c6d557d029d2. XX FH Key Location/Qualifiers FH FT source 1..2686 FT /organism="Maize streak virus" FT /isolate="MSV-SWyl" FT /mol_type="genomic DNA" FT /db_xref="taxon:10821" FT CDS join(2685..2686,1..304) FT /codon_start=1 FT /product="MP" FT /db_xref="GOA:B2BX45" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B2BX45" FT /protein_id="ABX71804.1" FT /translation="MDPQNSFLLQPRVPTAAPTSGGVPWSRVGEVAILSFVGLICFYLL FT YLWVLRDLILVLKARQGRSTEELIFGIQAVDRSNPIPNTQAPPSQGNPGPFVPGTG" FT CDS 315..1049 FT /codon_start=1 FT /product="CP" FT /db_xref="GOA:B2BX46" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B2BX46" FT /protein_id="ABX71802.1" FT /translation="MSTSKRKRGDDANWNKRTTKKKPSSAGLKKAGSKADRPSLQIQTL FT QHAGSTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAVDYHFVADAQACKYSNT FT GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET FT DGRIGSDIPPSNASWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT misc_feature complement(1216..1662) FT /note="nonfunctional RepB due to mutation" FT CDS complement(1557..2375) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:B2BX47" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B2BX47" FT /protein_id="ABX71803.1" FT /translation="MASSSSNRQFSHRNVNTFLTYPHCPENPEIVCQMIWELVGRWTPK FT YIICAREAHRDGDMHLHALIQTEKPVRITDSRFFDIKGFHPNIQSAKSVNKVRDYILKE FT PLALFERGTFIPRKSSFLGNPSKGNSEKKPSKDEIMREIISHSTSKLEYLSMIRKEFPY FT DWATKLQYFEYSANKLFPEIQEEFISPHPPSSPDLLCNESIKDWLQPNIFQVSPESYML FT LQPTCYTLEDAISDLEWMDKLSSQQMKEQESRASTSSVQQEQENQLGPEA" XX SQ Sequence 2686 BP; 697 A; 618 C; 674 G; 697 T; 0 other; ggatccacag aactcctttc ttctacagcc gcgggtaccc acagcagctc cgacatccgg 60 aggagtgccg tggagtcgcg tcggcgaggt agctattttg agctttgttg gattgatttg 120 cttttacttg ctttaccttt gggtgctgag agatcttatc ttagttctga aggctcgaca 180 aggcagatcc acggaggagc tgatatttgg aatacaagct gtggatagga gtaatcctat 240 ccctaataca caagcaccac caagtcaggg gaatcccggg ccgtttgttc caggcacggg 300 ataagcaatc agccatgtcc acgtccaaga ggaagcgcgg agatgatgcg aactggaata 360 agcggacgac taagaagaag ccttcgtcag ctggtctgaa gaaggctgga agcaaggccg 420 acaggccatc ccttcagatc cagacactcc agcatgctgg gtccaccatg ataacagtcc 480 cctccggagg agtatgtgac ctcatcaaca cctatgcccg aggatccgac gagggcaacc 540 gccacaccag cgagactctg acgtacaaga ttgccgtcga ctaccacttc gttgcagacg 600 cgcaagcctg caagtattct aacaccggga ccggtgtgat gtggctggtg tatgacacca 660 ctcccggcgg acaagcgccg accccacaaa ccatatttgc atatccggac acgctgaaag 720 cttggccggc aacatggaaa gtgagccggg agctgtgtca tcgcttcgtg gtgaaacggc 780 gatggttgtt caacatggag accgacggtc gaattggttc ggacatccct ccttcgaatg 840 caagttggaa gccgtgcaag cgcaacatat acttccacaa gttcacgagt gggttgggag 900 tgagaacgca gtggaagaat gtaacggacg gaggagttgg tgcgatacag agaggagctc 960 tgtacatggt cattgcccct ggcaatggcc ttacatttac tgcccatggg cagacccgtc 1020 tgtactttaa gagtgtcggc aaccagtaat gaataaaaac tccgttttat tatatctgat 1080 gaatgctcaa agcttacatt aatatgtcgt gcgatggcac gaaaaacaca cgcaaacaat 1140 acaggggggt agtcggcggg cggctaaggg tggtgctcgg cgggcaaaac atcgaaaaat 1200 caagatctat atgaattaca cttcctccgt aggaggaagc acagggggag aataccactt 1260 ctcccccggc gacattttat aaatcatgca gtttgcctcg aaatactcca gctgccctgg 1320 agtcatttcc ttcatccagt cttcatccca gttggcgagg atgattgtag gcttagactt 1380 catctgaact ttcttcttct tgccatattt tggatttaca acgaactctt tctgacagcc 1440 aactaactgt ttccaacaag gacagaattt aaaaggaata tcatctacga tgttgtagat 1500 tgcgtcttcg ttgtaagaag accaatcaac attattttgc caataattat gaagccctaa 1560 gcttctggcc caagttgatt ttcctgttct tgttggaccg acgatgtaga ggctctgctt 1620 tcttgttcct tcatctgttg gctggataat ttatccatcc attcaaggtc agagatagca 1680 tcttcgaggg tgtaacaggt aggttgaaga agcatgtatg attcgggact aacctggaag 1740 atgttaggct ggagccaatc tttgattgac tcattacaaa gaagatcagg tgaagagggt 1800 ggatgaggac tgatgaactc ttcctgaatc tcagggaaca atttatttgc agagtattca 1860 aaatactgca attttgtggc ccagtcatag gggaactctt tacgaatcat agagaggtac 1920 tctagctttg aagtggaatg tgaaataatc tctctcatta tttcatcttt ggaaggtttc 1980 ttttcagaat ttcccttgga aggatttcct aggaagcttg acttccgagg aatgaaagta 2040 cctctctcaa acaaggccag aggttccttg agaatgtaat ccctgacctt gtttacagat 2100 tttgcactct gaatgtttgg gtggaaccct ttgatatcaa agaaccttga gtcagtgatt 2160 cttaccggtt tctctgtctg gattaatgca tgtaaatgca tatctccatc tctgtgtgcc 2220 tctcgggcac atatgatata cttaggggtc caacgaccaa cgagctccca aatcatctga 2280 cagacgattt ctggattttc tggacagtgt ggatatgtta agaacgtgtt aacgttcctg 2340 tgtgagaact gacggttgga tgaggaggag gccatatcgg acgactccga gcagcttgcg 2400 ggatggcagg atgggagctc caaactctat atcaaccggc tgcgccttcg aaatccgccg 2460 ctcccccttt tatagtggtt gtttatgggc cggaccgggc cggcccagca ggaaaagaag 2520 gcgcgcaata atattaccgc gccttctttt cctgcgaggg cccgtaggga ccgagcgatt 2580 tgatttaaag ttcggttctg ctttgtctga tttatctaaa gcagcccaat ctaaagaaac 2640 cggtcccctg cgactataaa ttgtttcaca agtgcgattc atttat 2686 //