ID EU152259; SV 1; circular; genomic DNA; STD; VRL; 2690 BP. XX AC EU152259; XX DT 08-APR-2008 (Rel. 95, Created) DT 08-APR-2008 (Rel. 95, Last updated, Version 1) XX DE Maize streak virus isolate MSV-SBlu, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2690 RX DOI; 10.1016/j.jviromet.2007.12.014. RX PUBMED; 18280590. RA Shepherd D.N., Martin D.P., Lefeuvre P., Monjane A.L., Owor B.E., RA Rybicki E.P., Varsani A.; RT "A protocol for the rapid isolation of full geminivirus genomes from dried RT plant tissue"; RL J. Virol. Methods 149(1):97-102(2008). XX RN [2] RP 1-2690 RA Varsani A., Monjane A., Shepherd D., Owor B., Rybicki E., Martin D.; RT ; RL Submitted (12-SEP-2007) to the INSDC. RL Electron Microscope Unit, University of Cape Town, University Ave, RL Rondebosch, Cape Town, WP 7701, South Africa XX DR MD5; 33842226e40803460a232e5f62f71ce8. XX FH Key Location/Qualifiers FH FT source 1..2690 FT /organism="Maize streak virus" FT /isolate="MSV-SBlu" FT /mol_type="genomic DNA" FT /db_xref="taxon:10821" FT CDS join(2689..2690,1..304) FT /codon_start=1 FT /product="MP" FT /db_xref="GOA:B2BX37" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B2BX37" FT /protein_id="ABX71801.1" FT /translation="MDPQNALYYQPRVPTAAPTSGGVPWSRVGEVAILSFVALICFYLL FT YLWVLRDLILVLKARQGRSTEELIFGGQAVDRSNPIPNLPAPPSQGNPGPFVPGTG" FT CDS 315..1049 FT /codon_start=1 FT /product="CP" FT /db_xref="GOA:B2BX38" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B2BX38" FT /protein_id="ABX71798.1" FT /translation="MSTSKRKRGDDSNWSKRVPKKKPSSAGLKRAGSKADRPSLQIQTL FT QHAGTTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAVDYHFVADAAACRYSNT FT GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET FT DGRIGSDIPPSNASWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(1218..1664) FT /codon_start=1 FT /product="RepB" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:B2BX43" FT /protein_id="ABX71799.1" FT /translation="MDGFSIQSSDERSRKQSLYIVGPTRTGKSTWARSLGVHNYWQNNV FT DWSSYNEDAIYNIVDDIPFKFCPCWKQLVGCQRDFIVNPKYGKKKKVQKKSKPTIILAN FT SDEDWMKEMTPGQLEYFEANCIIYIMSPGEKWYSPPVLPPTEEV" FT CDS complement(1559..2377) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:B2BX40" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B2BX40" FT /protein_id="ABX71800.1" FT /translation="MASSSSNRQFSHRNANTFLTYPKCPENPEIACQMIWELVVRWIPK FT YILCAREAHKDGSLHLHALLQTEKPVRISDSRFFDINGFHPNIQSAKSVNRVRDYILKE FT PLAVFERGTFIPRKSPFLGKSDSEVKEKKPSKDEIMRDIISHATSKEEYLSMIQKELPF FT DWSTKLQYFEYSANKLFPEIQEEFTNPHPPSSPDLLCNESINDWLQPNIFQVSPEAYML FT LQPTCYTLEDAISDLQWMDSLSSHQMKDQESRASTSSAQQEPENLLGPEA" XX SQ Sequence 2690 BP; 690 A; 636 C; 694 G; 670 T; 0 other; ggatccacag aacgccctgt attatcagcc gcgggtaccc acagcagctc cgacatccgg 60 aggagtgccg tggagtcgcg taggcgaggt agctattttg agctttgttg cattgatttg 120 cttttacctg ctttaccttt gggtgctgag agaccttatc ttagttctga aggctcgaca 180 aggcagatcc acggaggagc tgatatttgg tggacaagct gtggatagga gcaaccctat 240 ccctaatcta cctgcaccac caagtcaggg caatcccggg ccatttgttc caggcacggg 300 ataagcaatc agccatgtcc acgtccaaga ggaagcgggg agatgattcg aattggagta 360 agcgggtgcc taagaagaag ccttcttcag ctgggctgaa gagggctgga agcaaggccg 420 ataggccatc cctccaaatc cagaccctcc agcatgctgg gaccaccatg ataacggtcc 480 catccggagg agtatgtgac ctcatcaaca cctatgcccg aggatctgac gagggcaacc 540 gccacaccag cgagactctg acgtacaaga tcgccgtcga ctaccacttc gttgctgacg 600 cggcagcctg ccgctactcc aacaccggaa ccggtgtaat gtggctggtg tatgacacca 660 ctcccggcgg acaagctccg accccgcaaa ctatatttgc ctaccctgac acgctaaaag 720 cgtggccggc cacatggaaa gtgagccggg agctgtgtca tcgcttcgtg gtgaaacggc 780 ggtggttgtt caacatggag accgacggtc ggattggttc ggatatccct ccctcgaatg 840 caagttggaa gccttgcaag cgcaacatct acttccacaa gttcacgagt gggttgggag 900 tgagaacgca gtggaagaat gtaacggacg gaggagttgg tgccatccag agaggagcct 960 tgtacatggt cattgccccc ggcaatggcc ttacatttac tgcccatggg cagacccgtc 1020 tgtactttaa gagtgttggc aaccagtaat gaataaaaac gcccgtttta ttatatctga 1080 tgaatgctga aagcttacat taatatgtcg tgcgatggca cgaaaaaaca cacgcaaaca 1140 atacaggggg gtagtcggcg ggcggctaag ggtggtgctc ggcgggcaga acatcgaaaa 1200 atcaagatct atatgaatta cacttcctcc gtaggaggaa gcacaggggg agaataccat 1260 ttctcccccg gcgacataat gtaaatgatg cagtttgcct cgaaatactc cagctgccct 1320 ggagtcattt ccttcatcca atcttcatcc gagttggcga ggattattgt aggcttagac 1380 ttcttctgca ccttcttctt cttaccatac ttggggttta caatgaaatc cctctgacag 1440 ccaactaact gtttccaaca aggacagaat ttaaacggaa tatcatctac gatgttgtag 1500 attgcgtctt cgttgtatga agaccaatca acattatttt gccagtaatt atgaacccct 1560 aggcttctgg cccaagtaga ttttccggtt cttgttgggc cgacgatgta gaggctctgc 1620 tttcttgatc tttcatctga tgactggata gagaatccat ccattggagg tcagaaattg 1680 catcctcgag ggtataacag gtaggttgaa ggagcatgta agcttcggga ctaacctgga 1740 agatgttagg ctggagccaa tcattgattg actcattaca aagtaaatca ggtgaggagg 1800 gtggatgagg attggtgaac tcttcctgaa tctcagggaa aagcttattt gcagagtatt 1860 caaaatactg caattttgtg gaccaatcaa agggaagctc tttctggatc atggagaggt 1920 actcttcttt ggaagtagcg tgtgaaataa tgtctcgcat tatttcatct ttagaaggct 1980 ttttttcctt tacctctgaa tcagattttc ctaggaaggg ggacttccta ggaatgaaag 2040 tacctctctc aaacacagcc agaggttcct tgagaatgta atccctcacc cggttaactg 2100 acttggcact ctgaatattt gggtgaaacc catttatatc aaagaacctt gagtcagata 2160 tccttaccgg cttctctgtc tggagcaatg catgtaaatg caaacttcca tctttatgtg 2220 cctctcgggc acatagaatg tacttgggaa tccaacgaac aacgagctcc cagatcatct 2280 gacaggcgat ttcaggattt tctggacact ttggataggt taggaacgtg ttagcgttcc 2340 tgtgtgagaa ctgacggttg gatgaggagg aggccatagc cgacgacgga ggctgaggct 2400 gagggatggc agactgggag ctccaaactc tatagtatac ctgtgcgcct tcgaaatccg 2460 ccgctccctt gtcttatagt ggttgtaaat gggccggacc gggccggccc agcaggaaaa 2520 gaaggcgcgc actaatatta ccgcgccttc ttttcctgcg agggcccggt agggaccgag 2580 cgctttgatt taaagcatgg tcctgctttg tatgatttat ctaaagcagc ccaatctaaa 2640 gaaaccggtc ccgggcacta taaattgcct aacaagtgcg attcattcat 2690 //