ID EU152257; SV 1; circular; genomic DNA; STD; VRL; 2689 BP. XX AC EU152257; XX DT 08-APR-2008 (Rel. 95, Created) DT 08-APR-2008 (Rel. 95, Last updated, Version 1) XX DE Maize streak virus isolate MSV-KKag, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2689 RX DOI; 10.1016/j.jviromet.2007.12.014. RX PUBMED; 18280590. RA Shepherd D.N., Martin D.P., Lefeuvre P., Monjane A.L., Owor B.E., RA Rybicki E.P., Varsani A.; RT "A protocol for the rapid isolation of full geminivirus genomes from dried RT plant tissue"; RL J. Virol. Methods 149(1):97-102(2008). XX RN [2] RP 1-2689 RA Varsani A., Monjane A., Shepherd D., Owor B., Rybicki E., Martin D.; RT ; RL Submitted (12-SEP-2007) to the INSDC. RL Electron Microscope Unit, University of Cape Town, University Ave, RL Rondebosch, Cape Town, WP 7701, South Africa XX DR MD5; 465bc2c0d02a78a0f9cab62215f08a62. XX FH Key Location/Qualifiers FH FT source 1..2689 FT /organism="Maize streak virus" FT /isolate="MSV-KKag" FT /mol_type="genomic DNA" FT /db_xref="taxon:10821" FT CDS join(2688..2689,1..304) FT /codon_start=1 FT /product="MP" FT /db_xref="GOA:A5JLM4" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:A5JLM4" FT /protein_id="ABX71793.1" FT /translation="MDPQNALYYQPRVPTAAPASAGVPWSRVGEVAILSFVALICFYLL FT YLWVLRDLILVLKARQGRSTEELIFGGQAVDRSNPIPNIPAPPSQGNPGPFVPGTG" FT CDS 315..1049 FT /codon_start=1 FT /product="CP" FT /db_xref="GOA:B2BX32" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B2BX32" FT /protein_id="ABX71791.1" FT /translation="MSTSKRKRGDDSNWSKRVTKKKPSSAGLKRAGSKADRPSLQIQTL FT QHAGTTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAVDYHFVADAAACRYSNT FT GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET FT DGRIGSDIPPSNASWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT misc_feature complement(1217..1663) FT /note="nonfunctional RepB due to mutation" FT CDS complement(1558..2376) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:B2BX36" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B2BX36" FT /protein_id="ABX71792.1" FT /translation="MASSSSNRQFSHRNANTFLTYPKCPENPEIACQMIWELVVRWIPK FT YILCAREAHKDGSLHLHALLQTEKPVRISDSRFFDINGFHPNIQSAKSVNRVRDYILKE FT PLAMFERGTFIPRKSPFLGKSDSEVKEKKPSKDEIMRDIISHSTSKVEYLSMIQKELPY FT DWSTKLQYFEYSANKLFPEIQEEFTNPHPQSSPDLLCNESINDWLQPNIFQVSPEAYML FT LQPTCYTLEDAISDLQWMDNLSSHQMKDQESRASTSSAQQEQENLLGPEA" XX SQ Sequence 2689 BP; 682 A; 635 C; 693 G; 679 T; 0 other; ggatccacag aacgccctgt attatcagcc gcgggtaccc acagcagctc cggcatccgc 60 aggagtgccg tggagtcgcg taggcgaggt agctattttg agctttgttg cactgatttg 120 cttttacctg ctttaccttt gggtgctgag agaccttatc ttagttctga aggctcgaca 180 aggcagatcc acggaggagc tgatatttgg aggacaagct gtggatagga gcaaccctat 240 ccctaatata ccagcaccac caagtcaggg caatcccggg ccatttgttc caggcacggg 300 ataagcattc agccatgtcc acgtccaaga ggaagcgggg agatgattcg aattggagta 360 agcgggttac taagaagaag ccctcttcag ctggtctgaa gagggctggc agcaaggccg 420 ataggccatc cctccaaatc cagacactcc agcatgctgg gaccaccatg ataacggtcc 480 catctggagg tgtatgtgac ctcatcaaca cctatgcccg aggatctgac gagggcaacc 540 gccacaccag cgagactctc acgtacaaga tcgccgtcga ctaccacttc gttgccgacg 600 cggcagcctg ccgctactcc aacaccggaa ccggtgtaat gtggctggtg tatgacacca 660 ctcccggcgg acaagctccg accccgcaaa ctatatttgc ctaccctgac acgctaaaag 720 cgtggccggc cacatggaag gtgagccggg agctgtgtca tcgcttcgtg gtgaaacggc 780 gatggttgtt caacatggag accgacgggc ggattggttc ggatattcct ccctcgaatg 840 caagttggaa gccttgcaag cgcaacatct acttccacaa gttcacgagc gggttgggag 900 tgagaacgca gtggaagaat gtaacggacg gaggagttgg tgccatccag agaggagctt 960 tgtacatggt cattgccccc ggcaatggtc ttacatttac tgcccatggg cagacccgtc 1020 tgtactttaa gagtgttggc aaccagtaat gaataaaaac tcccgtttta ttatatctga 1080 tgaatgctga aagcttacat taatatgtcg tgcgatggca cgaaaaaaca cacgcaatca 1140 atacaggggg gtagtaggcg ggcggctaag ggtggtgctc ggcgggcaga acatcgaaaa 1200 atcaagatct atctgaatgt actgcctccg taggaggcag ctcaggggga gaataccact 1260 tctcccccgg cgacataatg taaatgacgc agtttgcctc gaaatactcc agctgccctg 1320 gagtcatttc cttcatccaa tcttcatccg agttggcgag gattattgta ggcttagact 1380 tcttctgcac cttcttcttc ttaccatact tggggtttac aatgaaatcc ctctgacagc 1440 caactaactg tttccaacaa ggacagaatt taaacgggat atcatctacg atgttgtaga 1500 ttgcgtcttc gttgtatgaa gaccaatcaa cattattttg ccagtaatta tgaaccccta 1560 ggcttctggc ccaagtagat tttcctgttc ttgttgggcc gacgatgtag aggctctgct 1620 ttcttgatct ttcatctgat gactggataa attatccatc cattggaggt cagaaattgc 1680 atcctcgagg gtataacagg taggttgaag gagcatgtaa gcttcgggac taacctggaa 1740 gatgttaggc tggagccaat cattgattga ctcattacaa agtaaatcag gtgaggattg 1800 cggatgagga ttggtgaact cttcctgaat ctcaggaaaa agcttatttg cagagtattc 1860 aaagtactgc aattttgtgg accaatcata gggaagctct ttctggatca tggagaggta 1920 ctctaccttg gaagtagagt gtgaaataat gtctcgcatt atttcatctt tggaaggctt 1980 tttttcctta acttctgaat cagattttcc taggaagggg gacttcctag gaatgaaagt 2040 acctctctca aacatagcca gaggttcctt gaggatgtaa tccctcaccc tgtttactga 2100 cttggcactc tgaatgtttg ggtgaaaccc attaatatca aagaaccttg agtccgatat 2160 tcttaccggc ttctctgttt gaagcaatgc atgtaaatgc aaacttccat ctttatgtgc 2220 ctctcgggca catagaatgt acttgggaat ccaacgaaca acgagctccc agatcatctg 2280 acaggcgatt tcaggatttt ctggacactt tggataggtg aggaacgtgt tagcgttccg 2340 gtgtgagaac tgacggttgg atgaggagga ggccatagcc gacgacggag gttgaggctg 2400 agggatggca gactgggagc tccaaactct atagtatacc tgtgcgcctt cgaaatccgc 2460 cgctcccttg tcttatagtg gttgttaatg ggccggaccg ggccggccca gcaggaaaag 2520 aaggcgcgca ctaatattac cgcgccttct tttcctgcga gggcccggta gggcccgagc 2580 gatttgatgt aaagcttggt cctgctttgt atgatttatc taaagcagcc cattctaaag 2640 aaaccggtcc cgggcactat aaattgccta acaagtgcga ttcattcat 2689 //