ID   EU152254; SV 1; circular; genomic DNA; STD; VRL; 2690 BP.
XX
AC   EU152254;
XX
DT   16-DEC-2008 (Rel. 98, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Maize streak virus isolate MSV-Sasri_S, complete genome.
XX
KW   .
XX
OS   Maize streak virus
OC   Viruses; Geminiviridae; Mastrevirus.
XX
RN   [1]
RP   1-2690
RX   DOI; .1094/PDIS-92-6-0982A.
RX   PUBMED; 30769738.
RA   van Antwerpen T., McFarlane S.A.M., Buchanan G.F., Shepherd D.N.,
RA   Martin D.P., Rybicki E.P., Varsani A.;
RT   "First Report of Maize streak virus Field Infection of Sugarcane in South
RT   Africa";
RL   Plant Dis. 92(6):982-982(2008).
XX
RN   [2]
RP   1-2690
RA   Varsani A., van Antwerpen T., McFarlane S., Buchanan G.F., Shepherd D.N.,
RA   Rybicki E.P., Martin D.P.;
RT   ;
RL   Submitted (12-SEP-2007) to the INSDC.
RL   Electron Microscope Unit & Department of Molecular and Cell Biology,
RL   University of Cape Town, University Ave, Rondebosch, Cape Town, WP 7701,
RL   South Africa
XX
DR   MD5; 025d992394f5bd0a2451c4e54e91e839.
DR   EuropePMC; PMC2886952; 18753214.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2690
FT                   /organism="Maize streak virus"
FT                   /isolate="MSV-Sasri_S"
FT                   /mol_type="genomic DNA"
FT                   /country="South Africa"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:10821"
FT   CDS             join(2689..2690,1..304)
FT                   /codon_start=1
FT                   /product="MP"
FT                   /db_xref="GOA:B2BX37"
FT                   /db_xref="InterPro:IPR002621"
FT                   /db_xref="UniProtKB/TrEMBL:B2BX37"
FT                   /protein_id="ABX71773.1"
FT                   /translation="MDPQNALYYQPRVPTAAPTSGGVPWSRVGEVAILSFVALICFYLL
FT                   YLWVLRDLILVLKARQGRSTEELIFGGQAVDRSNPIPNLPAPPSQGNPGPFVPGTG"
FT   CDS             315..1049
FT                   /codon_start=1
FT                   /product="CP"
FT                   /db_xref="GOA:B7SB66"
FT                   /db_xref="InterPro:IPR000143"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:B7SB66"
FT                   /protein_id="ABX71772.1"
FT                   /translation="MSTSKRKRGDDSNWNKRVPKKKPSSAGLKRAGSKADRPSLQIQTL
FT                   HHAGTTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAVDYHFVADAAACRYSNT
FT                   GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET
FT                   DGRIGSDIPPSNTSWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP
FT                   GNGLTFTAHGQTRLYFKSVGNQ"
FT   CDS             complement(1218..1664)
FT                   /codon_start=1
FT                   /product="RepB"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:B7SB67"
FT                   /protein_id="ABX71771.1"
FT                   /translation="MDGFCIQSSDERSRKQSLYIVGPTRTGKSTWARSLGVHNYWQNNV
FT                   DWSSYNEDAIYNIVDDIPFKFCPCWKQLVGCQRDFIVNPKYGKKKKVQKKSKPTIILAN
FT                   SDEDWMKEMTPGQLEYFEANCIIYIMSPGEKWYSPPVLPPTEEV"
FT   CDS             complement(1559..2377)
FT                   /codon_start=1
FT                   /product="RepA"
FT                   /db_xref="GOA:B7SB68"
FT                   /db_xref="InterPro:IPR001146"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:B7SB68"
FT                   /protein_id="ABX71770.1"
FT                   /translation="MASSSSNRQFSHRNANTFLTYPKCPENPEIACQMIWELVVRWIPK
FT                   YILCAREAHKDGSLHLHALLQTEKPVRISDSRFFDINGFHPNIQSAKSVNRVRDYILKE
FT                   PLAVFERGTFIPRKSPFLGKSDSEVKEKKPSKDEIMRDIISHATSKAEYLSMIQKELPF
FT                   DWSTKLQYFEYSANKLFPEIQEEFTNPHPPSSPDLLCNESINDWLQPNIFQVSPEAYML
FT                   LQPTCYTIEDAISDLQWMDSVSSHQMKDQESRASTSSAQQEPENLLGPEA"
XX
SQ   Sequence 2690 BP; 695 A; 637 C; 685 G; 673 T; 0 other;
     ggatccacag aacgccctgt attatcagcc gcgggtaccc acagcagctc cgacatccgg        60
     aggagtgccg tggagtcgcg taggcgaggt agctattttg agctttgttg cattgatttg       120
     cttttacctg ctttaccttt gggtgctgag agaccttatc ttagttctga aggctcgaca       180
     aggcagatcc acggaggagc tgatatttgg aggacaagct gtggatagga gcaaccctat       240
     ccctaatcta ccagcaccac caagtcaggg caatcccggg ccatttgttc caggcacggg       300
     ataagcaatc agccatgtcc acgtccaaga ggaagcgggg agatgattcg aattggaata       360
     agcgggtgcc taagaagaag ccttcttcag ctgggctgaa gagggctgga agcaaggccg       420
     ataggccatc cctccaaatc cagacactcc atcatgctgg gaccaccatg ataacggtcc       480
     catccggagg agtatgtgac ctcatcaaca cctatgcccg aggatctgac gagggcaacc       540
     gccacaccag cgagactctg acgtacaaga tcgccgtcga ctaccacttc gttgccgacg       600
     cggcagcctg ccgctactcc aacaccggaa ccggtgtaat gtggctggtg tatgacacca       660
     ctcccggcgg acaagctccg accccgcaaa ctatatttgc ctaccctgac acgctaaaag       720
     cgtggccggc cacatggaaa gttagccggg agctgtgtca tcgcttcgtg gtgaaacggc       780
     gatggttgtt caacatggag accgacggtc ggattggttc ggatatccct ccctcgaata       840
     caagttggaa gccttgcaag cgcaacatct acttccacaa gttcacgagt gggttgggag       900
     tgagaacgca gtggaagaat gtaacggacg gaggagttgg tgccatccag agaggagcct       960
     tgtacatggt cattgccccc ggcaatggcc ttacatttac tgcccatggg cagacccgtc      1020
     tgtactttaa gagtgttggc aaccagtaat gaataaaaac gcccgtttta ttatatctga      1080
     tgaatgctga aagcttacat taatatgtcg tgcgatggca cgaaaaaaca cacgcaaaca      1140
     atacaggggg gtagtcggcg ggcggctaag ggtggtgctc ggcgggcaga acatcgaaaa      1200
     atcaagatct atatgaatta cacttcctcc gtaggaggaa gcacaggggg agaataccac      1260
     ttctcccccg gcgacataat gtaaatgatg cagtttgcct cgaaatactc cagctgccct      1320
     ggagtcattt ccttcatcca atcttcatcc gagttggcga ggattattgt aggcttagac      1380
     ttcttctgca cctttttctt cttaccatac ttggggttta caatgaaatc cctctgacag      1440
     ccaactaact gtttccaaca aggacagaat ttaaacggaa tatcatctac gatgttgtag      1500
     attgcgtctt cgttgtatga agaccaatca acattatttt gccagtaatt atgaacccct      1560
     aggcttctgg cccaagtaga ttttccggtt cttgttgggc cgacgatgta gaggctctgc      1620
     tttcttgatc tttcatctga tgactggata cagaatccat ccattggagg tcagaaattg      1680
     catcctcgat ggtataacag gtaggttgaa ggagcatgta agcttcggga ctaacctgga      1740
     agatgttagg ctggagccaa tcattgattg actcattaca aagtaaatca ggtgaggagg      1800
     gtggatgagg attggtgaac tcttcctgaa tctcaggaaa aagtttattt gcagagtatt      1860
     caaaatactg caattttgtg gaccaatcaa agggaagctc tttctggatc atggagaggt      1920
     actctgcttt ggaagtagcg tgtgaaataa tgtctcgcat tatttcatct tttgaaggct      1980
     ttttttcctt tacctctgaa tcagattttc ctaggaaggg ggacttccta ggaatgaaag      2040
     tacctctctc aaacacagcc agaggttcct tgagaatgta atccctcacc ctgttaactg      2100
     acttggcact ctgaatattt gggtgaaacc catttatatc aaagaacctt gagtcagata      2160
     tccttaccgg cttctctgtc tgaagcaatg catgtaaatg caaacttcca tctttatgtg      2220
     cctctcgggc acatagaatg tacttgggaa tccaacgaac gacgagctcc cagatcatct      2280
     gacaggcgat ttcaggattt tctggacact ttggataggt taggaacgtg ttagcgttcc      2340
     tgtgtgagaa ctgacggttg gatgaggagg aggccatagc cgacgacgga ggctgaggct      2400
     tagggatggc agactgggag ctccaaactc tatagtatac ctgtgcgcct tcgaaatccg      2460
     ccgctccctt gtcttatagt ggttgtaaat gggccggacc gggccggccc agcaggaaaa      2520
     gaaggcgcgc actaatatta ccgcgccttc ttttcctgcg agggcccggt agggaccgag      2580
     cgctttgatt taaagcctgg tcctgctttg tatgatttat ctaaagcagc ccaatctaaa      2640
     gaaaccggtc ccgggcacta taaattgcct aacaagtgcg attcattcat                 2690
//