ID EU151723; SV 4; linear; genomic RNA; STD; VRL; 4230 BP. XX AC EU151723; XX DT 02-OCT-2007 (Rel. 93, Created) DT 08-JUL-2016 (Rel. 129, Last updated, Version 5) XX DE Opium poppy mosaic virus isolate PHEL5235, complete genome. XX KW . XX OS Opium poppy mosaic virus OC Viruses; Riboviria; Tombusviridae; Calvusvirinae; Umbravirus. XX RN [1] RP 1-4230 RA Tang J., Wei T., Ochoa-Corona F., Clover G.; RT "Identification and characterization of Opium poppies mosaic virus: a novel RT member of Umbravirus"; RL Unpublished. XX RN [2] RP 1-4230 RA Tang J., Wei T., Ochoa-Corona F., Clover G.; RT ; RL Submitted (12-SEP-2007) to the INSDC. RL Investigation and Diagnostic Centres, Biosecurity, Ministry of Agriculture RL and Forestry, 231 Morrin Road, St Johns, PO Box 2095, Auckland 1140, New RL Zealand XX RN [3] RC Amino acid sequence updated by submitter RP 1-4230 RA Tang J., Wei T., Ochoa-Corona F., Clover G.; RT ; RL Submitted (24-OCT-2014) to the INSDC. RL Investigation and Diagnostic Centres, Biosecurity, Ministry of Agriculture RL and Forestry, 231 Morrin Road, St Johns, PO Box 2095, Auckland 1140, New RL Zealand XX RN [4] RC Sequence update by submitter RP 1-4230 RA Tang J., Wei T., Ochoa-Corona F., Clover G.; RT ; RL Submitted (31-JUL-2015) to the INSDC. RL Investigation and Diagnostic Centres, Biosecurity, Ministry of Agriculture RL and Forestry, 231 Morrin Road, St Johns, PO Box 2095, Auckland 1140, New RL Zealand XX RN [5] RC Sequence update by submitter RP 1-4230 RA Tang J., Wei T., Ochoa-Corona F., Clover G.; RT ; RL Submitted (08-SEP-2015) to the INSDC. RL Investigation and Diagnostic Centres, Biosecurity, Ministry of Agriculture RL and Forestry, 231 Morrin Road, St Johns, PO Box 2095, Auckland 1140, New RL Zealand XX DR MD5; 10143ae85830b4fc7ead2ded77bbac0f. DR EuropePMC; PMC4737148; 26578603. XX CC On Sep 8, 2015 this sequence version replaced gi:909076157. XX FH Key Location/Qualifiers FH FT source 1..4230 FT /organism="Opium poppy mosaic virus" FT /host="Papaver somniferum (opium poppy)" FT /isolate="PHEL5235" FT /mol_type="genomic RNA" FT /country="New Zealand" FT /note="PCR_primers=fwd_name: OPMVf1, rev_name: OPMVr1; FT PCR_primers=fwd_name: OPMVf2, rev_name: OPMVr2" FT /db_xref="taxon:473784" FT CDS join(10..951,951..2606) FT /codon_start=1 FT /ribosomal_slippage FT /product="RNA-dependent RNA polymerase" FT /note="ORF2" FT /db_xref="GOA:A0A097PAC9" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:A0A097PAC9" FT /protein_id="AIU44175.3" FT /translation="MDFVDRITRWLSGDFKPSAYIKSRNECVVAYGEEWATLVTQSRMQ FT REASRQYADWYNSASPTTCTMPPPTDAELIEEARVGKLKAGLDQPKKQQEAASINLGGI FT KTPPPMSEEQSTLLDLEALPSYDQIVAVGKLRRLQLQSACPQYTDEERASWAIIPYTGG FT PRVIREDEVLPRAPSVVLLNDAPRSMSKIEELVKACFATIDKVAKWRKVDYIDFSSKAA FT QTPPSKYKLQEPGEVMKGMNAQSVAMELRCRYGVQPCTAANLQLGNRVAREILDRQCQA FT TREQVYYYGHLATTMWFQPTLVDLALRAGAKDFLIGDVYARAGMETRVKTSIHPAIRVM FT RAARPRAVDRVSYQIDVVRPCADFGVHNNSLNNLIRGVNERVFYTDHKRTVPVKPLPTG FT FDEIDISMLKTFKVSPWTMEQVVESYKGSQKTRYQNALESLRIQPLTRADARVKTFVKA FT EKINFTAKPDPAPRVIQPRDPRFNLCFAKYTKPLEPMLYKQLGKLYKYPCIAKGFNAVE FT TGEIIAKKWAMFKDPVCVGLDASRFDQHVSVEALRFTHKVYKRFVQGHEVNKLLSWMYT FT NHALGSAKDGYVKYEITGCRMSGDMDTALGNCTLMVLMTHHLCKSLDIEHELMNNGDDC FT IIIMDQAKLPLLQQNVAKFYERLGFKMKVEEPVFQLERVDFCQTRPVYDGRKWRMVRHI FT SSISKDCCTVINWEQLAPWWCAIGTCGLAVAAGIPIHNSFLKWLKRSGGDEGGIRSHAL FT WKNEGLAWYRMGLDLSHEDHVSDAARLSFQTAFGISPEMQVALEGIYDSLPAPSVGGRD FT YRTKGIHGCETVVALPSRHFNNYFDDVPTNTSQSHSADPGDLNFEPGVLWNFT" FT CDS 10..954 FT /codon_start=1 FT /product="replicase-associated protein" FT /note="ORF1" FT /db_xref="UniProtKB/TrEMBL:A0A0R9S3U5" FT /protein_id="ALD14487.1" FT /translation="MDFVDRITRWLSGDFKPSAYIKSRNECVVAYGEEWATLVTQSRMQ FT REASRQYADWYNSASPTTCTMPPPTDAELIEEARVGKLKAGLDQPKKQQEAASINLGGI FT KTPPPMSEEQSTLLDLEALPSYDQIVAVGKLRRLQLQSACPQYTDEERASWAIIPYTGG FT PRVIREDEVLPRAPSVVLLNDAPRSMSKIEELVKACFATIDKVAKWRKVDYIDFSSKAA FT QTPPSKYKLQEPGEVMKGMNAQSVAMELRCRYGVQPCTAANLQLGNRVAREILDRQCQA FT TREQVYYYGHLATTMWFQPTLVDLALRAGAKDF" FT CDS 2789..3526 FT /codon_start=1 FT /product="putative phloem RNA movement protein" FT /note="ORF3" FT /db_xref="InterPro:IPR006902" FT /db_xref="UniProtKB/TrEMBL:G0KUS6" FT /protein_id="AEJ80234.2" FT /translation="MASLPNVSSSSKSRMQGRTTQRAIRRGDGQRARRNRPGHTDPPPS FT RAEACRNPAPAPKNPGKNRGSLEETPHHKKHRGPVVPRENRGSVHPTRPRRRRRRGDHM FT GSRQHATTPEQCWGACVLSTERRAEIDGLLSPLLHTALMQGWGDPEVLVYSIRVLRGEL FT RQWRKPVQSLHNVATEDRGNSAQLSAPIATEPPNMQAPSKEQPAVDGSPKICNLGCNID FT KVCGHPKPGEGNSGSTTQAGNTW" FT CDS 2805..3578 FT /codon_start=1 FT /product="putative cell-to-cell movement protein" FT /note="ORF4" FT /db_xref="InterPro:IPR000603" FT /db_xref="UniProtKB/TrEMBL:G0KUS7" FT /protein_id="AEJ80235.2" FT /translation="MSAVVAKAECKEELLNALYGEVTVKELEETDLGILTPHRAERKLV FT ATPLLPPRTQGRIAAVLKKLRTTRNTGGLLFLEKIVVVFTPHVPDDVVGEVTIWVHDNM FT LPHLNSVGERVCFPLNAGPRLMAFYPPYSIPLSCRVGEIPRCLYIVSEYSGVNFASGAS FT PFSLYIMWQPKIEATAHNYLPRSPLNLPICRHQVKNSLQSMAAQKSAISGAISTRFADI FT PNLEREIAEAQPRLETPGSRTIYDGVGLGIASTSN" XX SQ Sequence 4230 BP; 1077 A; 1103 C; 1121 G; 929 T; 0 other; gtggctacca tggatttcgt tgatcgcata acccgctggc taagcggaga ttttaagccc 60 tcagcttaca ttaaatcacg aaacgaatgt gtcgtcgctt acggcgaaga gtgggctacc 120 ttagtgaccc aaagtcggat gcaaagggaa gcctctaggc agtacgcgga ctggtataat 180 tccgctagtc ccactacctg caccatgcca ccccccacag atgctgagct tatagaagag 240 gctcgagtgg ggaaattaaa ggccggcctc gatcagccca agaaacaaca ggaggcggcg 300 tcgatcaacc tggggggcat caagacaccc ccccccatgt ctgaggagca atccaccctc 360 ctcgacctgg aagccctacc gagctacgac caaatcgtcg cggtaggaaa actgaggagg 420 ctgcagttgc agtctgcctg ccctcaatac accgatgagg agcgggccag ctgggccata 480 atcccttaca cagggggccc aagagtgatt cgggaagatg aggtcttacc ccgtgcaccc 540 agcgtcgtcc tgctgaacga cgccccacgc tccatgtcga aaattgagga gctggtgaag 600 gcctgcttcg ccaccattga taaggtggcg aaatggagga aggtggatta catagacttt 660 tcctctaagg cggcacagac gccccccagc aaatacaaac tgcaggagcc tggggaggtg 720 atgaagggca tgaatgccca aagcgtggcc atggagctac gctgcagata tggcgtgcaa 780 ccttgcacag ctgcaaactt gcagcttgga aaccgtgtgg cacgggaaat tcttgaccgc 840 cagtgtcaag ccacacgaga gcaggtgtat tactacgggc accttgctac caccatgtgg 900 ttccagccaa ccttggttga cctggccctc cgggccgggg ccaaggattt ttaattgggg 960 atgtgtacgc tcgtgcgggg atggagacaa gggtcaagac atctatacac cccgcaatac 1020 gagtgatgcg tgcggcacgt ccccgagccg tagatagagt gtcgtaccag atcgacgtgg 1080 tacggccctg tgccgatttc ggtgtccaca acaactccct taacaatctc attaggggag 1140 ttaatgaacg ggtcttctac actgatcaca agagaacagt gcccgttaag ccactaccca 1200 cgggttttga cgagattgat atctctatgt taaaaacctt taaagtttcc ccgtggacca 1260 tggagcaggt agttgaatca tacaaagggt cacaaaagac ccgctaccaa aacgctcttg 1320 agagtttgag aatccaaccc cttacccgtg ctgacgctag agtgaaaacc ttcgtcaagg 1380 ccgagaagat caacttcaca gcgaagcctg atccagctcc tcgagttatt caaccgcgtg 1440 atccacggtt taacttgtgc tttgctaagt acacaaagcc tctcgagcca atgctgtaca 1500 aacagctggg taagctatat aagtatccct gcatcgctaa gggatttaat gcagtagaaa 1560 ctggtgaaat cattgccaag aaatgggcaa tgttcaaaga cccagtatgt gtgggacttg 1620 atgcgagccg ctttgaccaa catgtgtctg ttgaggctct caggttcaca cacaaggttt 1680 acaagagatt tgtccaaggg catgaggtca acaagctcct ctcatggatg tacacgaacc 1740 atgccttggg gtccgcaaaa gatgggtacg ttaaatacga gataacagga tgccgtatga 1800 gtggtgacat ggacacggct ctcggtaact gtaccctaat ggtactaatg acgcaccacc 1860 tatgcaagtc tcttgatatt gagcatgagc tgatgaacaa tggcgatgat tgtattataa 1920 tcatggatca agccaagctc cctctactgc aacaaaacgt agctaagttc tacgagaggt 1980 tgggtttcaa gatgaaagtg gaagagcctg tcttccaact agaacgagtt gacttttgcc 2040 agactagacc tgtttatgat ggtcgcaaat ggcgaatggt gcgccacatt tccagcatat 2100 ccaaggattg ctgtacagtc atcaattggg agcagctagc tccctggtgg tgcgccatag 2160 gcacatgcgg tcttgctgta gccgctggca tccctataca caactcgttc ttaaagtggc 2220 taaagcgctc cgggggtgat gaagggggaa ttagatccca cgccctctgg aaaaatgaag 2280 gattagcttg gtaccgtatg ggtttagact tgtctcatga ggaccatgtc tccgacgcag 2340 ctcgattgag ttttcagacc gcttttggca tctctcctga gatgcaagta gcgttggagg 2400 gcatctacga tagtctaccc gccccttctg ttggcggacg tgattaccgc acgaagggga 2460 tacacggatg cgaaaccgtg gttgcactcc ctagtaggca tttcaacaac tactttgacg 2520 acgtgcccac aaataccagc caatcccata gcgcagaccc aggagacctc aactttgaac 2580 ctggggtgtt gtggaatttc acttagtgcc catccagttg gccgttggat ggatgttctg 2640 tactaggcct gtggagtcca ttgttcactg ctagccgggc actgtgttgc aagcgccgga 2700 agcttagtcg cagggggtta caccctccct tgagttcttg cattcccctt accatggcca 2760 gccgcggaca atggccgaag ggtattgaat ggcatcctta ccaaatgtca gcagtagtag 2820 caaaagcaga atgcaaggaa gaactactca acgcgctata cggagaggtg acggtcaaag 2880 agctcgaaga aaccgacctg ggcatactga ccccccaccg agcagagcgg aagcttgtcg 2940 caaccccgct cctgccccca agaacccagg gaagaatcgc ggcagtcttg aagaaactcc 3000 gcaccacaag aaacaccggg ggcctgttgt tcctcgagaa aatcgtggta gtgttcaccc 3060 cacacgtccc agacgacgtc gtaggagagg tgaccatatg ggttcacgac aacatgctac 3120 cacacctgaa cagtgttggg gagcgtgtgt gctttccact gaacgcaggg ccgagattga 3180 tggccttcta tcccccctac tccataccgc tctcatgcag ggttggggag atcccgaggt 3240 gcttgtatat agtatcagag tactccgggg tgaacttcgc cagtggcgca agcccgttca 3300 gtctttacat aatgtggcaa ccgaagatcg aggcaacagc gcacaattat ctgccccgat 3360 cgccactgaa cctcccaata tgcaggcacc aagtaaagaa cagcctgcag tcgatggcag 3420 cccaaaaatc tgcaatctcg ggtgcaatat cgacaaggtt tgcggacatc ccaaacctgg 3480 agagggaaat agcggaagca caacccaggc tggaaacacc tggtagtcgc accatctatg 3540 atggtgttgg gttaggaatt gcctccacca gtaactaaac ccaaccacag ccaagcatta 3600 agttgcaagc gttggagtgg caggcttaac gtccgacagt acgacaactg cggtgtgcgg 3660 tacaccccac gttacccagg cgtggcattt ccttcggaga agggacctcc agaccctaag 3720 ctgactgaca ttcggttgtt gcgacgctta gttataacat gggtgggttt agagttgcaa 3780 tatagtggga gccgggtcct ggtaaacagg ttgagttggt ctcgtaatct cgggtggact 3840 gccaatccac cgtcgcacca ctctcatggg ctattgcacc ctctaatagg gagtttcagg 3900 aacacccatt atttaacaat aaagtggatg cagactccac gcctcaggaa tagcacggtt 3960 gattgcaaaa gtttccgtag tcaaactgag ggttctgccg agagagttgc catgctcttg 4020 gtctccctag tcaatggctc acacgatctg tgtgatggga cgcgtttcgg ttagacgcac 4080 ccaggttccc actactactg gtcaattgta gtggaaccct cctcgggctg aggtcgcttg 4140 tacattagcg gtacccacgg cgggcttaca atagtcgttg ggaatgtacg tcccagatat 4200 agcgggtggt ggtcactccc atccgcgccc 4230 //