Dbfetch

Dbfetch

ID   EU148510; SV 1; linear; genomic RNA; STD; VRL; 2013 BP.
XX
AC   EU148510;
XX
DT   01-SEP-2008 (Rel. 97, Created)
DT   08-FEB-2009 (Rel. 99, Last updated, Version 2)
XX
DE   Beet mild yellowing virus isolate N32 CP-RT fusion protein and coat protein
DE   genes, complete cds.
XX
KW   .
XX
OS   Beet mild yellowing virus
OC   Viruses; Riboviria; Luteoviridae; Polerovirus.
XX
RN   [1]
RP   1-2013
RA   Kozlowska-Makulska A., Beuve M., Szyndel M.S., Lemaire O., Herrbach E.,
RA   Bouzoubaa S.;
RT   ;
RL   Submitted (11-SEP-2007) to the INSDC.
RL   Virology, INRA, 28 rue de Herrlisheim, Colmar 68021, France
XX
DR   MD5; 7503052d3ef539fe151efd5e3d141436.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2013
FT                   /organism="Beet mild yellowing virus"
FT                   /host="sugar beet"
FT                   /isolate="N32"
FT                   /mol_type="genomic RNA"
FT                   /country="France"
FT                   /db_xref="taxon:156690"
FT   CDS             1..2013
FT                   /codon_start=1
FT                   /transl_except=(pos:607..609,aa:OTHER)
FT                   /product="CP-RT fusion protein"
FT                   /note="ORF3-5; translated via readthrough of CP stop codon"
FT                   /db_xref="GOA:B5L2B9"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR002929"
FT                   /db_xref="UniProtKB/TrEMBL:B5L2B9"
FT                   /protein_id="ABY64532.1"
FT                   /translation="MNTVVGRRTINGRRRPRRQTRRAQRSQPVVVVQTSRTTQRRPRRR
FT                   RRGNNRTRRTVSTRGTGSSETFVFSKDNLAGSSSGAITFGPSLSDCPAFADGMLKAYHE
FT                   YKISMVILEFVSEASSQNSGSIAYELDPHCKLSALSSTINKFGITKPGRRAFTASYING
FT                   TDWHDVAKDQFRILYKGNGSSSIAGSFRITMKCQFHNPKXVDKEPGPSPGPSPSPQPAP
FT                   SKKYRFIVYTGVPVTRIMAQSTDDAISLYDMPSQRFRYIEDENMNWTNLDSRWYSQNSL
FT                   KAIPMIIVPVPQGEWTVEISMEGYQPTSSTTDPNKDKQDGLIAYNDDLKEGWNVGVYNN
FT                   VEITNNKADNTLKYGHPDMELNSCHFNQGQCLERDGDLTCHVKTTGDNASFFVVGPAVQ
FT                   KQSKYNYAVSYGAWTDRMMEIGMIAIALDEQGSSGSAKIERPKRVGHSMAVSTWETINL
FT                   PEKENSEEFKTDQRQDLKTHPAAGGSSDMLDIVQGGLPLPVEEDIPDSIMDDPWSNIPA
FT                   KSSQEDEAMTSKSGFKPQLKPPGLPRPQPVRTIRNFDPEPDLVEAWRPDVNPGYSKEDV
FT                   AAATVMYGGSVKEGRSMIDKRDKAVLDGRKSWGSSLASSLTGGTLKASAKSEKLAKLTS
FT                   SERAQFERIKRQQGATRASEFLEQLLAGTNLDPRF"
FT   CDS             1..609
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP; ORF3"
FT                   /db_xref="GOA:B5L2C0"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:B5L2C0"
FT                   /protein_id="ABY64531.1"
FT                   /translation="MNTVVGRRTINGRRRPRRQTRRAQRSQPVVVVQTSRTTQRRPRRR
FT                   RRGNNRTRRTVSTRGTGSSETFVFSKDNLAGSSSGAITFGPSLSDCPAFADGMLKAYHE
FT                   YKISMVILEFVSEASSQNSGSIAYELDPHCKLSALSSTINKFGITKPGRRAFTASYING
FT                   TDWHDVAKDQFRILYKGNGSSSIAGSFRITMKCQFHNPK"
XX
SQ   Sequence 2013 BP; 584 A; 500 C; 485 G; 444 T; 0 other;
     atgaatacgg tcgtgggtag gagaacgatc aatggaagaa gacgaccacg taggcaaaca        60
     cgacgcgctc agcgctctca gccagtggtt gtggtccaaa cctctcggac aacacaacgc       120
     cgacctagac gacgacgaag aggtaacaac cggacaagaa gaactgtttc taccagagga       180
     acaggttcga gcgagacatt cgttttctca aaagacaatc tcgcgggaag ttccagcgga       240
     gcaatcacgt tcgggccgag tctatcagac tgcccggcat tcgctgatgg aatgctcaag       300
     gcctaccatg agtataaaat ctcgatggtc atcttggagt tcgtctccga ggcctcttcc       360
     caaaattccg gttccatcgc ttacgagctg gacccacact gtaaactcag tgccctttca       420
     tcaaccatta acaagttcgg gatcacaaag cccggcagga gggcatttac agcgtcttac       480
     atcaacggga cggactggca tgacgttgcc aaggaccaat tcaggatcct ctacaaaggc       540
     aatggttctt catcgatagc tggttctttt agaatcacca tgaaatgcca gttccacaat       600
     cccaaatagg tagacaagga acccggccct agcccagggc cttctccctc tccacaaccc       660
     gcaccctcaa agaaatatcg ttttatcgtc tatactggtg tccctgtgac ccgtataatg       720
     gcccaatcca ctgatgacgc catctctctg tacgacatgc cttctcaacg gtttcgctac       780
     atagaagacg agaatatgaa ctggacaaac ctcgattctc gatggtattc ccagaattct       840
     ttgaaagcca tcccaatgat aatagtacca gtccctcaag gtgagtggac tgtggaaatt       900
     tcgatggagg ggtatcaacc aacctcaagc accacagatc ctaataagga caaacaagat       960
     ggtcttattg catacaatga tgacctcaag gagggttgga atgtgggggt ttataacaat      1020
     gtggagataa ccaacaataa ggctgataat actttgaagt acggccatcc agacatggag      1080
     ctcaatagtt gtcatttcaa tcaaggacaa tgtctggaaa gagatggaga tttgacttgt      1140
     cacgttaaaa caactggtga caatgcctcc ttctttgttg ttggtcccgc tgtccagaag      1200
     caatccaaat acaattatgc cgtttcatac ggagcctgga cagatcggat gatggagata      1260
     gggatgatag ccatagcact tgatgaacaa ggctcatccg gttccgcaaa gatagaaaga      1320
     ccaaagagag tcgggcactc catggcagtc tcaacctggg agactataaa cttaccggag      1380
     aaggaaaact ccgaggaatt caaaaccgat caaagacaag atctcaaaac tcatcccgca      1440
     gctggcggga gttccgatat gctggatatc gttcaaggag gcttacccct tcctgttgaa      1500
     gaagacatcc ctgattccat catggatgac ccttggtcca atataccggc caagagttcg      1560
     caggaagatg aggctatgac atcaaagagt ggttttaaac cccaattgaa gcctcctggc      1620
     ctgccgagac cacaaccggt taggacgatc cgaaatttcg atccagaacc ggatttagtt      1680
     gaggcatggc gacccgacgt gaaccccgga tattccaaag aagatgtggc agcggccact      1740
     gtcatgtacg ggggttccgt taaagaaggc cgatctatga ttgacaagcg tgataaagct      1800
     gtgttagacg gccgcaagag ttggggttct tccttggcgt cctccttaac gggaggaacg      1860
     cttaaggcct ctgcaaagtc agagaagctt gccaaactca cttcgagtga aagggcgcaa      1920
     ttcgaacgaa ttaagcgcca gcaaggtgcc acacgagctt cagagttctt agaacaactt      1980
     ctggctggca caaaccttga cccaaggttc tga                                   2013
//