ID EU136039; SV 1; linear; genomic RNA; STD; VRL; 7215 BP. XX AC EU136039; XX DT 05-MAR-2008 (Rel. 95, Created) DT 05-MAR-2008 (Rel. 95, Last updated, Version 1) XX DE Dandenong virus isolate 0710-2678 segment L Z protein (Z) and RNA-dependent DE RNA polymerase (L) genes, complete cds. XX KW . XX OS Dandenong virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Arenaviridae; unclassified Arenaviridae; Arenavirus; OC Old world arenaviruses; unclassified Old world arenaviruses. XX RN [1] RP 1-7215 RX DOI; 10.1056/NEJMoa073785. RX PUBMED; 18256387. RA Palacios G., Druce J., Du L., Tran T., Birch C., Briese T., Conlan S., RA Quan P.-L., Hui J., Marshall J., Fredrik Simons J., Egholm M., RA Paddock C.D., Shieh W.-J., Goldsmith C.S., Zaki S.R., Catton M., RA Lipkin W.I.; RT "A new arenavirus in a cluster of fatal transplant-associated diseases"; RL N. Engl. J. Med. 358(10):991-998(2008). XX RN [2] RP 1-7215 RA Palacios G.F., Druce J., Lei D., Tran T., Birch C., Briese T., Conlan S., RA Quan P.-L., Hui J., Marshall J., Fredrik Simons J., Egholm M., Ierino F., RA Shieh W.-J., Goldsmith C., Zaki S., Catton M., Lipkin W.I.; RT ; RL Submitted (04-SEP-2007) to the INSDC. RL Center for Infection and Immunity, Department of Epidemiology, Mailman RL School of Public Health, Columbia University, 722 W 168th Street, Floor 18, RL New York, NY 10032, USA XX DR MD5; b58e5a29ed6e5ac16033b10a173f0604. DR EuropePMC; PMC2680969; 19478873. DR EuropePMC; PMC3310648; 22000372. DR EuropePMC; PMC3321973; 20350390. DR EuropePMC; PMC3557881; 23171649. XX FH Key Location/Qualifiers FH FT source 1..7215 FT /organism="Dandenong virus" FT /segment="L" FT /isolate="0710-2678" FT /mol_type="genomic RNA" FT /db_xref="taxon:483046" FT gene 84..356 FT /gene="Z" FT CDS 84..356 FT /codon_start=1 FT /gene="Z" FT /product="Z protein" FT /db_xref="GOA:B1NX60" FT /db_xref="InterPro:IPR003224" FT /db_xref="InterPro:IPR024183" FT /db_xref="InterPro:IPR038485" FT /db_xref="UniProtKB/TrEMBL:B1NX60" FT /protein_id="ABY20731.1" FT /translation="MGQAKSKETKLSKKEDRAEVLPDATYLGPLNCKSCWQRFDSLVRC FT HDHYLCRQCLNLLLTVSDRCPLCKHPLPTKLRVSTAPSSPPPYEE" FT gene complement(586..7215) FT /gene="L" FT CDS complement(586..7215) FT /codon_start=1 FT /gene="L" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:B1NX61" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR010453" FT /db_xref="InterPro:IPR026382" FT /db_xref="UniProtKB/TrEMBL:B1NX61" FT /protein_id="ABY20732.1" FT /translation="MRKDISELRSLCLNYIEQDERLSRQKLSFLGQREPKLVLIEGLKL FT LSRCIEMDSADKSGCTHNFEDKSVEAILIESGIVCPGLPLIIPDGYKLIDNSLVLLECF FT VRSTPASFERKFIEDTNKLASIKEDLALAGITLVPIVDGRCSYDNSFMPDWVNFKFRDL FT LFRLLEYSSQNEQVLEESEYFRLCESLKTTVDKRSGMDSMKVLKDARSTHNELIMKMCH FT DGVNPTMSCDEVAIGINSLFSRFRRDLEGGKLTRNFRMVDPETLIEEFSCLYENITEVD FT DIRGLSREAIESCPLMRFITGDTEGHKRCQTSSTIYERLLSMLNKVKSLKLLNTRRRQL FT LKLDVLCLSSLIKQCDSEALTNEKHWVGVCYSSVNDRLVSYCSTREEFLRVLRNRKRSK FT SNRGTPLEELFKTSIQDFILKVKKCLSAVGLSFAHYGLSEDLISECQITLNDFEEFKRH FT GTHPVMHYTRFEDYTFQTDERQLTDIRSLKKLSSVCLALTNSMKTSSVARLRQNQLGSI FT RYQVVECKEVFFQVAKVGNEEYHLLYQKTGECSRCYSLQGPTGHLISFYADPKRYFLPI FT FSDEVLFGMVAVMISWIRSCPDLVDQIHDIEVALRTLVLLLLTNPTKRNQKQVQNVRYL FT VMALVSDFSSVSLMDKLKEDLITHAEKVVYKLLRFLLRKVFLTGGKVMLSAKFKFMLNV FT SYLCHLITKETPDRLTDQIKCFEKFFEPKTQFGFFVNPKEVISPQEEEAFFEQMKKFVS FT KDADCQRVVPGINLEAFSLMVSSFNNGTLIHKGEKKLNNLDPMTNSGCATALDLASNKS FT VVVNKHLNGERLLEYDFNKLLVSAVSQITEGFVRKTKYKLSHTDYEYKVSKLVSRLVLN FT IEKGHSGDKEVSMDNTYFEGEEETLFFKEMEDKVKSTISHYGKGTTIGQLRDLKGEKGA FT KGLHHLQMVLTGKSSHLRKIILSEISFHLVEDFDPACLSPNDMKFICEAVEGSAELSSL FT YFTHTVKEQCGLDEMAMNLCRKFFSEGDWFSCLKMILLQMNANAYSGKYRHVQRQGLNF FT KFDWDRLEEDVRISERESNSESLSKALSLTKCMSAALKNLCFYSEESPTSYTSVGPDSG FT RLKFALSYKEQVGGNRELYIGDLRTKMFTRLVEDYFESFSSFFSGSCLNNEKEFENAIL FT SMTINVREGLLNYSMDHSKWGPMMCPFLFLMLLQNLRLGDDQYVKSGKDHVSTLLTWHM FT HKLVEVPFPVVNALMKSYIKAKLKLLKGTQTTATEEIFKNYFDSGVVPSHISSLIDMGQ FT GILHNASDFYGLVSERFINYCIGVIFGERPDAYTSSDDQITLFDKKLSELVDKDPEEVL FT ILLEFHSHLSGLLNKFISPKSVVGRFAAEFKSRFYVWGEEVPLLTKFVSAALHNVKCKE FT PHQLCETIDTIADQAVANGVPILLVNCIQKRTLDLLKYANFPLDPFLLNVDTDVKDWLD FT GSRGYRIQRLIENLCPEETKVMRKLIRRLHHKLKNGEFNEEFFLDLFNREKEDAILQLA FT EILNIEDDLSDLANINWLNLNEMFPMRMVLRQKVVYPSVMNFQEEKVPSLIKTLQNKLC FT SKFTRGAQKLLSEAINKSAFQSCISSGFIGLCKTLGSRCVRDKSKENLYIKRILEDLSR FT DNHVSRIQRGDDINLYICDKRAHPEPNLCHISLLRPLLWDYICVSLSNSFELGVWVLAE FT PIKAREAVKSVPNQLNACDYVARKPESSRLLEDKINLNHVLQSVRRLYPQIFEEQLLPF FT MSDQSSKNMRWSPRIKFLDLCVLIDINSESLSLISHIVKWKRDEHYTVLFSDLVNSHQR FT TDSSLTDEFVVSTRDVCKNFLKQVYFESFVREFVVTSRTLGNFSWFPHRDMMPSEDGAE FT AMGPLQSFVLKVVNKDVERPMYKTDLQFGYGWFSYRLGDTVCNAALLIKQGMVNPRVFE FT TLGDIWDYILKQTKGLLEFTLTVDFVHNQNNTEHLRRFSLMFTVKCRLLDPGIAEFLSC FT TYMFKGEVDRRLLDECLNLLRTDPVFKIKDGTFDIRSDEFEDYMIDPLVLGDSIELELL FT KSNNILADVKSFDFSRVGPEWEPVPLTIRCGAFYEGRNFVQNIVVNLETKDLRVMLAEL FT EGYERIDEVLCNLLSHRFRTGEHLVNSEINAIIQELHITKSILLSPLRGVPDWFTFRDC FT RLCYSRSKDTIMFETVGGKFRLKGRSCDDWLGEPAVQDID" XX SQ Sequence 7215 BP; 2035 A; 1761 C; 1304 G; 2115 T; 0 other; cgcaccgagg atcctaggcg tttatttgcg cttttgtgtg gacaactttc atttaaaagt 60 caatctttgg atactgcgtc atcatgggtc aagcaaaatc caaagaaaca aagctctcca 120 agaaagagga cagagcagag gttctacctg acgcaaccta tcttggtcct ctgaactgca 180 aatcatgctg gcaaaggttc gacagtttgg ttaggtgcca tgaccactac ctatgcaggc 240 aatgtctgaa ccttttgttg acagtctcag acagatgccc tctctgcaaa caccctctac 300 cgaccaagct gagggtgtcg acagccccca gctcacctcc cccctacgag gagtgagcaa 360 ctgaaggacc cgcccaaccc caccaaccct ccacacgccc aacccacagg cacagcagcc 420 gcacagacac acaaacagag acacacacac acacacccaa gcaccacaag ccccgccgcg 480 ggccacgaag cacaacacac acccacaccc caacccccac cagggggggc cccccggggg 540 gaccccccgg gggggagaga gagagggcgc actcgcgggc gccgctcagt ctatgtcctg 600 caccgcgggt tcccccagcc agtcatcgca ggatcttccc ttgagcctga acttcccacc 660 taccgtttca aacatgatgg tatcttttga cctgctgtag cagagcctac agtctctgaa 720 ggtaaaccaa tctggcacac cccttaatgg tgagagtaaa atggactttg tgatgtgcaa 780 ctcctgtata atagcattta tctccgaatt caccaagtgc tcacctgttc taaatctgtg 840 cgaaagaagg ttgcaaagca cctcatcaat tctctcataa ccctccagtt cagccagcat 900 taccctgagg tccttagtct ctagattgac cacaatgttt tgaacaaagt tcctcccctc 960 ataaaaggca ccacacctaa tagtcagagg cacaggctcc cactcaggtc caactctgct 1020 gaagtcaaaa gatttaacat cagccaagat gttattggac ttcaacaatt ccagttcaat 1080 agagtcacca agcacaagtg ggtcaatcat ataatcctca aattcatcag atcgaatatc 1140 aaaggtgcca tcttttattt tgaagacagg atctgttctc aacagattga ggcattcatc 1200 tagcaatctt ctgtccacct cacccttgaa catataagtg cacgacagaa actcagcaat 1260 tcctggatca agcaatctgc atttcactgt gaacatcagt gagaatctcc ttaagtgttc 1320 tgtgttgttt tggttgtgca caaaatcaac agtcaatgtg aattctaaaa gaccctttgt 1380 ttgtttgaga atgtaatccc atatgtctcc caatgtctca aatacccttg ggtttaccat 1440 gccttgcttt atcagcaaag ctgcattgca gactgtgtcc cccagacgat aagaaaacca 1500 tccataccca aattgtaaat cggttttgta cataggtctt tcaacatcct tattcaccac 1560 cttcagcaca aatgactgaa ggggccccat ggcctccgcc ccgtcttcgg agggcatcat 1620 gtctcggtga ggaaaccatg aaaagtttcc caatgttcgg gatgtcacca caaattcccg 1680 aacaaatgac tcaaagtaca cttgttttaa gaagttttta cacacatccc ttgtgctaac 1740 tacaaattca tcagttaaac ttgaatcagt acgctggtgc gagttgacaa ggtctgaaaa 1800 gagaactgtg tagtgctcat ccctcttcca ctttactatg tgtgaaatga gtgacagcga 1860 ctcagaattt atatcgatca acacacataa atcgaggaac tttatacgag gactccatct 1920 catattctta gagctttgat ctgacatgaa tggcaaaagt tgttcctcaa aaatctgagg 1980 atacagtctc ctgacagatt gcaagacatg gtttaagttg attttgtcct ccaaaagtct 2040 tgagctctca ggtttcctag caacgtagtc acaagcatta agctggtttg gtactgattt 2100 tacagcttct cttgctttaa tgggctctgc cagcacccac acacctagtt cgaatgaatt 2160 actcaaagaa acacaaatgt aatcccagag gagaggcctc aagaggctta tatgacagag 2220 gttaggctct gggtgtgcac gcttgtcgca tatgtacaga tttatgtcat cacctctttg 2280 gattcttgac acatggttgt ctcgtgatag atcctccaag attcttttta tataaagatt 2340 ctccttactt ttatccctga cacatctgct ccctagagtc ttgcaaagac ctataaagcc 2400 tgaagaaatg cagctctgga aagctgactt gtttatagct tctgaaagca gcttctgtgc 2460 ccctctagtg aatttcgaac ataacttatt ctgaagggtt tttatcaatg agggtacctt 2520 ttcctcttga aagttcatta ctgatgggta gaccaccttt tgtcttaaca ccattctcat 2580 ggggaacatt tcattaaggt ttaaccagtt tatgtttgca agatcactta aatcatcctc 2640 tatgttgaga atttctgcaa gctgaagaat ggcatcctct ttctctctgt tgaagaggtc 2700 tagaaagaat tcctcattaa actctccatt ttttaacttg tgatgcagtc ttcttattag 2760 cttcctcatc acctttgttt cttctgggca caaattctca atcaaccttt gaatcctata 2820 acctctggaa ccatctagcc agtccttcac atctgtgtcc acatttaata agaaaggatc 2880 caatgggaaa tttgcatact tcaagaggtc caatgttctt ttctgaatgc agttgaccaa 2940 caaaatagga acaccattag caacagcttg atctgcaatt gtatcaatgg tctcacacaa 3000 ctgatgaggt tccttgcact tcacattatg tagagctgct gacacaaatt tagtaaggag 3060 gggcacttct tctccccaga cataaaaccg cgacttaaac tcagctgcaa acctgccgac 3120 aacacttttt gggctgatga acttattcag aagcccactt aagtgggagt gaaattccaa 3180 taaaatgagg acttcttctg gatctttatc aactaattca cttagttttt tgtcaaaaag 3240 agtgatttgg tcatcacttg atgtgtaagc atctggtctc tcaccaaaga tgacaccgat 3300 gcagtagtta ataaatctct cgctgaccaa gccataaaag tcagaagcat tgtgtaaaat 3360 tccttgaccc atatcaatga ggctagaaat atgtgagggc acaactcctg aatcaaaata 3420 attcttaaag atctcttctg ttgctgttgt ctgtgttccc tttaaaagtt tcaatttggc 3480 cttaatgtaa gacttcatta gtgcattaac aacaggaaat gggacctcca caagtttgtg 3540 catgtgccag gtcaatagag tgcttacatg gtctttgccg gacttgacat actgatcatc 3600 acccaaacgg agattctgta agagcattag gaataaaaat gggcacatca ttggacccca 3660 cttactatgg tccatactat agtttagaag cccttctctc acatttattg tcatggataa 3720 aattgcattt tcaaactctt tctcattatt tagacaagaa cctgagaaga agcttgagaa 3780 agattcaaag taatcttcga caagccttgt gaacatcttt gttcttaaat caccaatgta 3840 tagttctctg tttcccccaa cttgttcttt gtaggataat gcgaatttta gcctcccaga 3900 atcagggccc acagaggtgt acgatgttgg cgactcctct gagtaaaaac agaggttctt 3960 taaggcagcg ctcatacact ttgttaatga cagggcctta ctcagtgact cagaattact 4020 ctctctttca ctaatcctca catcctcctc aagcctatcc caatcaaact tgaagttcaa 4080 accctgtctc tgcacatgcc tatatttacc tgagtatgca ttagcattca tctgcagtag 4140 tatcattttc aaacatgaga accaatcccc ctctgaaaaa aacttcctgc aaagattcat 4200 tgccatttca tccaggccgc actgttcttt aacagtgtgg gtaaagtaca atgaagagag 4260 ctctgcactc ccttcaacag cttcacagat gaatttcata tcattgggcg aaaggcaggc 4320 cgggtcaaag tcctccacca gatgaaatga aatctctgat agtataatct tcctcaagtg 4380 agatgacttc cctgtcaaga ccatttgcaa atgatgcaag cctttggccc ctttttcccc 4440 ttttagatct cttagttgtc caatagttgt tccctttcca taatgggata ttgttgactt 4500 caccttatct tccatctcct taaagaaaag tgtttcctct tcaccctcaa aataagtgtt 4560 gtccatacta acttccttat ccccactatg tcctttctca atgttaagaa ctaacctgga 4620 cactaactta gacaccttat actcataatc agtgtggctc aacttatatt tagttttcct 4680 aacaaaccct tcggtgatct ggctaacagc actaacaagc aacttgttga aatcatactc 4740 aagaaggcgt tccccattta ggtgcttgtt gacaacaaca ctcttgttac ttgccaagtc 4800 cagtgctgta gcgcaaccag aatttgtcat tgggtccaag ttattgagtt tcttctctcc 4860 tttatgaatc agtgtgccat tgttgaatga ggagaccata agactgaaag cctccaagtt 4920 tatacctgga accactcttt gacagtctgc atccttactg acaaattttt tcatttgttc 4980 aaaaaaggct tcttcttcct gaggggagat cacctctttg ggattgacaa agaagccaaa 5040 ttgggttttt ggttcaaaga acttctcaaa acattttatc tgatcagtca gtctgtcagg 5100 tgtctccttt gttattaaat gacacaaata tgaaacattt agcataaatt tgaactttgc 5160 actgagcatc actttccccc ctgtgagaaa aaccttcctt aataggaatc tcaataactt 5220 gtaaaccacc ttctcagcat gagttatcaa atcctccttt aatttgtcca ttaatgatac 5280 agaagagaaa tctgagacca gggccattac taagtacctc acattttgaa cttgcttttg 5340 atttcttttg gtaggatttg tcagcaacaa cagaaccagt gtccttaaag cgacttcaat 5400 gtcatggatc tgatcaacaa ggtcaggaca tgatctgatc caggaaatca tcacggcaac 5460 cataccaaac aagacctcat cggagaatat tggtaggaag tatctctttg gatctgcata 5520 aaaagaaatt agatgacctg ttggcccctg caaagagtag cacctcgagc attcccctgt 5580 cttttgatat aatagatgat actcttcatt accaaccttg gccacctgaa agaaaacctc 5640 tttacactct accacctggt acctgattga gcccaactga ttctgcctca atctggccac 5700 tgagctagtc ttcatactgt tggttaatgc caaacagaca gatgaaagtt tctttaaact 5760 ccttatgtct gttagttgcc tttcatctgt ttgaaaagtg taatcctcaa atcttgtgta 5820 gtgcatcact gggtgagtcc catgtctctt gaattcctca aaatcattga gtgtgatctg 5880 acattcagat atcaaatctt cagacaaccc atagtgcgca aagctaaggc ccactgcaga 5940 gaggcatttt ttaactttta ggataaagtc ttgtatagaa gttttaaaca attcttctaa 6000 gggtgtaccc ctgtttgatt tagacctttt cctatttctt aaaaccctta agaactcctc 6060 ccttgtgcta cagtaactta ctagtctgtc attcacactg ctataacaaa ctcccaccca 6120 gtgtttttca tttgtgagag cctcagagtc acactgcttg atgagagatg aaaggcagag 6180 aacatccagt ttaagtagct gtctccttct agtgttcaaa agtttcaagc tcttcacctt 6240 gttcagcatt gaaagcaacc tttcatagat agtgctactt gtttgacatc ttttatgtcc 6300 ttcagtatcc cctgtgataa atctcattaa tgggcaagac tcaattgctt ccctgctcaa 6360 accacgaata tcatcgactt ctgttatgtt ctcataaaga caggagaact cttcaatcag 6420 tgtttcgggg tctaccatcc tgaagttcct tgtcaatttt cctccctcca ggtctcttct 6480 aaacctacta aagagggagt tgatgcctat agccacctca tcacaactca tggtgggatt 6540 cacgccatca tgacacattt tcatgatcag ctcattgtgg gttgaccttg cgtccttcaa 6600 caccttcatt gaatccatgc cggatcgttt atcaacagtg gtttttaggg actcacaaag 6660 cctgaagtat tctgattcct caagaacctg ctcattttga ctggaatact caagtagtct 6720 gaataaaagg tctctaaatt taaagttgac ccaatctggc atgaaactat tgtcatagga 6780 gcagcggcca tccactatag ggaccagagt tatacctgca agtgcaaggt cctcctttat 6840 acttgccaat ttgttggtat cctcaatgaa cttcctctca aaactcgctg gtgtgctccg 6900 tacaaaacac tcaaggagta caagagaatt gtctatcaat ttatacccat ctgggatgat 6960 taaaggtaag ccgggacaca caatccccga ctctatgaga atagcctcca cagacttgtc 7020 ctcgaagtta tgtgtgcatc cgcttttgtc tgcgctgtcc atctctatac accttgagag 7080 caatttgagc ccttcaatca gcactagttt gggctccctc tgtcctagga agctcaactt 7140 ttgtcttgat agtcgctcat cttgctcaat atagttcaga caaaggcttc ttaattctga 7200 aatgtctttc ctcat 7215 //