ID   EU095940; SV 1; linear; viral cRNA; STD; VRL; 828 BP.
XX
AC   EU095940;
XX
DT   12-DEC-2007 (Rel. 94, Created)
DT   16-MAR-2011 (Rel. 108, Last updated, Version 3)
XX
DE   Capsicum chlorosis virus isolate CaCV-To-India nucleocapsid protein (N)
DE   gene, complete cds.
XX
KW   .
XX
OS   Capsicum chlorosis virus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Tospoviridae; Orthotospovirus;
OC   Capsicum chlorosis orthotospovirus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-828
RA   Kankanallu R.S., Kunkalikar S., Poojari S., Rajagopalan P.A., Zehr U.B.,
RA   Naidu R.A.;
RT   "First Report of Capsicum chlorosis virus in Tomato in India";
RL   Plant Health Prog. 0:0(2007).
XX
RN   [2]
RP   1-828
RX   DOI; 10.1094/PHYTO-02-10-0046.
RX   PUBMED; 21299415.
RA   Kunkalikar S.R., Poojari S., Arun B.M., Rajagopalan P.A., Chen T.C.,
RA   Yeh S.D., Naidu R.A., Zehr U.B., Ravi K.S.;
RT   "Importance and genetic diversity of vegetable-infecting tospoviruses in
RT   India";
RL   Phytopathology 101(3):367-376(2011).
XX
RN   [3]
RP   1-828
RA   Kunkalikar S., Poojari S., Rajagopalan P.A., Zehr U.B., Naidu R.A.,
RA   Kankanallu R.S.;
RT   ;
RL   Submitted (14-AUG-2007) to the INSDC.
RL   Molecular Virology, Mahyco Life Science Research Centre, Dawalwadi, Jalna,
RL   Maharahstra 431203, India
XX
DR   MD5; 8a9f287d8799fe29f045581ec2539d5b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..828
FT                   /organism="Capsicum chlorosis virus"
FT                   /host="tomato"
FT                   /isolate="CaCV-To-India"
FT                   /mol_type="viral cRNA"
FT                   /country="India"
FT                   /PCR_primers="fwd_seq: catgccatggcaatgtctamcgtyaagcaact,
FT                   rev_seq: ccgctcgagcamttccarmgaagkrcyag"
FT                   /note="serogroup: WSMoV"
FT                   /db_xref="taxon:163325"
FT   gene            1..828
FT                   /gene="N"
FT   CDS             1..828
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:A9UD00"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:A9UD00"
FT                   /protein_id="ABW81471.1"
FT                   /translation="MSTVKQLTEKKIRELLAGGTADVEIETEDSTPGFSFKTFYDNNKS
FT                   VEMTFTNCLNILKCRKQIFAACKSGKYKFCEKTIVSTDANVGPEDWTFKRTEALIRVKM
FT                   INMVEKSKNESARQEMYAKVMELPLVAAYGLNIPALFDSCALRMMLCIGGPLPLLSSIK
FT                   GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKEDLNTLFKQAVKL
FT                   LSESNPGTASSISLKKYDEQVKYMDKAFSANLSVDDYGVHSKKSSKPSPSLEL"
XX
SQ   Sequence 828 BP; 271 A; 130 C; 178 G; 249 T; 0 other;
     atgtctaccg ttaagcaact taccgagaag aaaattagag aacttttggc tggtggaact        60
     gcagatgttg aaattgagac tgaggattca actcctggat tcagtttcaa gacattctat       120
     gataataaca agagcgttga aatgacgttc acaaactgtc ttaatatttt gaaatgtaga       180
     aagcagattt ttgctgcttg caaaagtgga aagtataagt tctgtgaaaa aacaattgtt       240
     tctacagacg ctaatgttgg tccagaggat tggactttta agagaacaga agctttaata       300
     agagttaaga tgatcaacat ggtagaaaag agtaagaatg aaagtgctag gcaagagatg       360
     tatgcaaagg tgatggaatt acctttagtg gcagcatatg gattgaacat acctgctttg       420
     tttgattcat gtgctctcag gatgatgtta tgtattggtg gtcctctacc actattatcc       480
     agcattaaag gccttgcacc aattattttc ccattggctt attaccaaaa tgttaaaaaa       540
     gagaaattgg gcatcaaaaa cttctctacc tatgaacagg tttgcaaagt ggctaaagtt       600
     ctttctgctt ctcaaataga atttaaggaa gatctgaaca cattgttcaa acaggctgtc       660
     aagttgctta gtgaaagcaa ccctggtact gctagttcta tctcacttaa gaagtatgat       720
     gagcaagtca agtatatgga caaagcgttt agtgccaatt tgtctgtgga tgattatggt       780
     gttcattcaa agaagagctc aaagcctagc ccttctctgg aattgtaa                    828
//