ID   EU091148; SV 1; linear; genomic RNA; STD; VRL; 1360 BP.
XX
AC   EU091148;
XX
DT   01-JUN-2008 (Rel. 96, Created)
DT   01-JUN-2008 (Rel. 96, Last updated, Version 1)
XX
DE   Cucurbit aphid-borne yellows virus clone pXHY1030-10 polymerase (RdRp) and
DE   coat protein (CP) genes, partial cds.
XX
KW   .
XX
OS   Cucurbit aphid-borne yellows virus
OC   Viruses; Riboviria; Luteoviridae; Polerovirus.
XX
RN   [1]
RP   1-1360
RX   DOI; 10.1007/s00705-008-0083-0.
RX   PUBMED; 18414972.
RA   Xiang H.Y., Shang Q.X., Han C.G., Li D.W., Yu J.L.;
RT   "Complete sequence analysis reveals two distinct poleroviruses infecting
RT   cucurbits in China";
RL   Arch. Virol. 153(6):1155-1160(2008).
XX
RN   [2]
RP   1-1360
RA   Han C.;
RT   ;
RL   Submitted (09-AUG-2007) to the INSDC.
RL   Plant Pathology, China Agricultural University, No.2 Yuanmingyuan West
RL   Road, Haidian District, Beijing 100094, China
XX
DR   MD5; dbc540fe60647992fd556b1e75a0a4bd.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1360
FT                   /organism="Cucurbit aphid-borne yellows virus"
FT                   /host="bitter gourd"
FT                   /isolate="Beijing"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /clone="pXHY1030-10"
FT                   /note="acronym: CABYV"
FT                   /db_xref="taxon:91753"
FT   gene            <1..576
FT                   /gene="RdRp"
FT   CDS             <1..576
FT                   /codon_start=1
FT                   /gene="RdRp"
FT                   /product="polymerase"
FT                   /db_xref="GOA:B3FHT5"
FT                   /db_xref="InterPro:IPR001795"
FT                   /db_xref="UniProtKB/TrEMBL:B3FHT5"
FT                   /protein_id="ABW77572.1"
FT                   /translation="SVSDWLLEDDMEVRNRLTLDLNETTRRLRAAWLYCISNSVLCLSD
FT                   GTLLAQRVPGVQKSGSYNTSSSNSRIRVMAAYHCGAEWAMAMGDDALESACSNLERYKS
FT                   LGFKVEESSKLEFCSHIFEKEDLAIPVNKAKMLYKLIHGYEPECGNVEVLINYLAACFS
FT                   ILNELRSDPSLVETLHQWLVLPVQPQKI"
FT   misc_feature    577..775
FT                   /note="intergenic NCR"
FT   gene            776..>1360
FT                   /gene="CP"
FT   CDS             776..>1360
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:B3FHT6"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:B3FHT6"
FT                   /protein_id="ABW77573.1"
FT                   /translation="MNTAAARNQNAGRRRRRNQRSIRRDRVVVVNPSGGPPRGRRQRRN
FT                   RRRPNRGGRARGRSPGETFVFSKDNLTGSSSGSITFGPSLSESPAFSSGILKAYHEYKI
FT                   IMVQLEFISEASSTSSGSISYELDPHCKLSSLQSTINKFGITKNGLRRWAARQINGMEW
FT                   HDATEDQFKILYKGNGSSSVAGSFRITIKCQV"
XX
SQ   Sequence 1360 BP; 367 A; 346 C; 339 G; 308 T; 0 other;
     agcgtttcgg actggcttct tgaagatgac atggaagtcc gaaaccgcct gacgctagat        60
     ctaaatgaaa ccacgcgccg tttacgagca gcatggttat attgcatatc aaatagcgtc       120
     ctctgccttt ctgacggaac attattagcg cagagagtcc caggcgtgca gaagagcggc       180
     agctacaata cgtcatcgag caattcccgt attcgggtga tggctgccta ccactgtggc       240
     gcggaatggg caatggcgat gggcgacgac gccctagagt cagcttgctc gaacctcgag       300
     cgttacaaat cgctcggttt taaagtcgag gagtcctcaa aactggaatt ctgttctcac       360
     atctttgaga aagaggacct cgccattccg gtcaacaagg caaagatgct ttacaagctc       420
     atacatggct atgaaccgga atgtggcaat gtggaagtgc tgattaatta cttggccgcc       480
     tgtttctcaa ttctcaatga gttgcggtct gatccttccc ttgtcgaaac tctccaccag       540
     tggctggtcc ttccagtgca gccacaaaag atataagggg agtataaaga acactagcca       600
     agcacacacg agttgcaagc attggaagta caagtctcgt taccaagagt ccacacaata       660
     gattacaaat ttctcgcagg attttctagc ggtctattgt ctgcagtacc agttacggta       720
     atcggactct attttgtcta cctaaagatt tcagcacacg tgcgatcaat tgttaatgaa       780
     tacggccgcg gctagaaatc aaaatgcagg gaggcggagg cgaagaaatc agcgctctat       840
     acggcgcgac cgcgtggttg tggtcaaccc ctctggggga ccaccgcgcg gaagacgaca       900
     acgaagaaac cgccgacgcc ctaatcgagg aggcagagct agaggaagga gcccaggcga       960
     aacattcgta ttttcaaagg acaatctcac gggcagttcc tcaggaagta tcaccttcgg      1020
     gccgtctcta tcagagagcc cggcattcag ctctggaata ctcaaggcct accatgaata      1080
     taagatcatc atggtccagc tggagttcat ctccgaggcc tcttccacct cctcgggctc      1140
     catctcttat gagttggacc cccactgcaa gcttagctcc ctccaatcca cgattaataa      1200
     atttggaatc accaagaatg gattacgacg ttgggcagct aggcagatca acgggatgga      1260
     atggcatgac gcaactgagg accaattcaa gatcctctat aaagggaacg gatcttcctc      1320
     ggttgcaggc agcttcagga tcaccatcaa gtgccaggtc                            1360
//