ID   EU056309; SV 1; circular; genomic DNA; STD; VRL; 1783 BP.
XX
AC   EU056309;
XX
DT   27-FEB-2008 (Rel. 94, Created)
DT   27-FEB-2008 (Rel. 94, Last updated, Version 1)
XX
DE   Cygnus olor circovirus isolate H51, complete genome.
XX
KW   .
XX
OS   Swan circovirus
OC   Viruses; Circoviridae; Circovirus.
XX
RN   [1]
RP   1-1783
RX   DOI; 10.1016/j.virusres.2007.11.001.
RX   PUBMED; 18082907.
RA   Halami M.Y., Nieper H., Muller H., Johne R.;
RT   "Detection of a novel circovirus in mute swans (Cygnus olor) by using
RT   nested broad-spectrum PCR";
RL   Virus Res. 132(1-2):208-212(2008).
XX
RN   [2]
RP   1-1783
RA   Halami Y.M., Nieper H., Mueller H., Johne R.;
RT   ;
RL   Submitted (25-JUL-2007) to the INSDC.
RL   Federal Institute for Risk Assessment, Diedersdorfer Weg 1, Berlin 12277,
RL   Germany
XX
DR   MD5; 99dc2946011f9665b28969a260261983.
DR   EuropePMC; PMC5165205; 27795441.
DR   EuropePMC; PMC5869500; 29498637.
DR   EuropePMC; PMC6160883; 30078831.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1783
FT                   /organism="Swan circovirus"
FT                   /host="mute swan (Cygnus olor)"
FT                   /isolate="H51"
FT                   /mol_type="genomic DNA"
FT                   /country="Germany"
FT                   /collection_date="2006"
FT                   /db_xref="taxon:459957"
FT   CDS             48..929
FT                   /codon_start=1
FT                   /product="putative replication-associated protein"
FT                   /db_xref="GOA:B0YPT4"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:B0YPT4"
FT                   /protein_id="ABU48443.1"
FT                   /translation="MAKKSDYGYKRWVFTINNPTFEDYVSVIEFCTAENCKFAIVGEEK
FT                   GEKEGTPHLQGFLSLRKNARAAALEENLGGRAWLSRAVGSDEENEEYCSKETTYLRVGT
FT                   PNRKGRSSDLNAAASEVLAGAPMTDVARKYPTTYIMFGRGLERLRQLIVETLRDWKTEV
FT                   IVLIGPPGSGKSRYVFEFPAERKYYKARGKWWDGYEGNDVVVMDDFYGWLPYDDLLRIC
FT                   DRYPIRVEYKGGMTQFVAKTLIITSNREPREWYKCEVDCTALYRRIDRYLVQTPDGFLE
FT                   APEFMLPYKIKY"
FT   CDS             complement(968..1723)
FT                   /codon_start=1
FT                   /product="putative capsid protein"
FT                   /db_xref="GOA:B0YPT5"
FT                   /db_xref="InterPro:IPR003383"
FT                   /db_xref="InterPro:IPR038652"
FT                   /db_xref="UniProtKB/TrEMBL:B0YPT5"
FT                   /protein_id="ABU48444.1"
FT                   /translation="MSLSRAGSRRLYHRRRRAYYRRRRYGRRRLRIPRIRRRFTVFHVK
FT                   QTQNIPFTFWSSATPDPTDKWMSLSLESNSATLNKPKPGLNLRFAMFGDRLPGSGNAYH
FT                   YPFDYYMIKLVKVELRPAFNPFQKQKTQGSTYIDKEGDITEVPATTPWSVDPYAAMSSR
FT                   KTWTPDRYHKRVFIPKPTIQSSQTTGTRFSTWFVPGRRNMWINSTQDQVIHYGMGMSLR
FT                   APAEDAGAYPVECTVTFYIAFGQWTGLSP"
XX
SQ   Sequence 1783 BP; 403 A; 399 C; 508 G; 473 T; 0 other;
     accggcgcct ctactacgta ctacagcccg cccgagcagc gaccgagatg gcgaaaaaga        60
     gcgattacgg ctacaaaagg tgggtgttca cgattaataa ccctaccttt gaagattatg       120
     tttctgttat agagttctgt accgcggaaa actgcaagtt cgcgatcgtc ggagaagaga       180
     aaggagagaa agagggaaca cctcacctgc agggattcct gtctctacga aagaatgctc       240
     gggccgctgc ccttgaagag aacctgggag gaagagcatg gctgtctcgt gctgtgggat       300
     ctgacgaaga gaacgaagaa tattgttcca aagagacgac ataccttcga gttggaacgc       360
     caaatcgtaa aggccgttcg tccgatctga acgccgctgc atccgaagtg ctcgccggcg       420
     ctccgatgac tgacgtggcc cggaagtacc ccaccactta tataatgttc gggcgtggct       480
     tggaacgcct ccgtcagctg atcgttgaga cgcttcgtga ttggaagacg gaggtgattg       540
     ttctgattgg tccgcccggg agcgggaaga gccgttacgt gtttgaattt cccgccgagc       600
     ggaagtacta taaagcgcgc ggaaagtggt gggatgggta tgagggtaat gacgtcgtcg       660
     taatggacga cttttatggg tggttaccgt acgatgattt gttgagaatt tgtgaccgat       720
     acccaatccg tgttgagtat aagggtggga tgacgcagtt cgttgccaag acccttatca       780
     taacgtctaa ccgtgaaccc cgcgaatggt ataaatgtga ggtggattgt accgccctct       840
     accgtcgtat cgatcggtat ttggtgcaga cccctgatgg ttttctggaa gcccccgaat       900
     tcatgctacc atataaaata aagtattaga cacgtaaact ttattgagag tgtgtggtta       960
     cattttgtta aggtgagagc ccggtccatt gaccgaatgc gatatagaag gttaccgtac      1020
     attctacagg gtatgcacca gcgtcttctg cgggtgccct gagggacatg cccatgccgt      1080
     aatgtatgac ctggtcctgt gttgagttga tccacatgtt tctccttccc ggtacgaacc      1140
     atgtgctgaa tcttgtgcct gttgtttggc tcgattgaat ggtcggtttc ggtatgaata      1200
     ctcgtttgtg gtaccggtca ggcgtccagg tcttacgtga gctcattgct gcatatggat      1260
     ctacagacca cggtgttgtt gcaggcacct ctgttatatc accttcctta tctatgtatg      1320
     tgctgccttg tgtcttctgc ttttggaagg ggttgaacgc gggtcgtagt tcaactttta      1380
     ctagttttat catgtagtag tcgaaggggt aatggtacgc attaccggat cctggcagtc      1440
     tgtctccgaa catagcgaaa cggaggttca ggccaggttt cggtttgttc agggttgcgg      1500
     agttgctttc cagggagagg gacatccatt tgtcggttgg atcgggcgtt gctgaagacc      1560
     agaacgtgaa cggtatgttc tgtgtctgtt taacgtggaa tactgtaaag cggcgtctta      1620
     ttcttgggat cctaagcctt cgtcttccat atcttcgtct gcggtagtag gcccgcctac      1680
     gacgatgata tagacgcctg gaccccgccc tggacagcga catgacggac agtgacttcc      1740
     tgtgggcgga gaaagcaccg tcagaggcgc cgtatatatt att                        1783
//