ID   EF675245; SV 1; linear; genomic RNA; STD; VRL; 1918 BP.
XX
AC   EF675245;
XX
DT   04-JUL-2007 (Rel. 92, Created)
DT   16-SEP-2010 (Rel. 106, Last updated, Version 3)
XX
DE   Papaya leaf distortion mosaic virus isolate TW-P-WF polyprotein gene,
DE   partial cds.
XX
KW   .
XX
OS   Papaya leaf distortion mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1918
RX   DOI; 10.1094/PHYTO-98-7-0848.
RX   PUBMED; 18943262.
RA   Bau H.J., Kung Y.J., Raja J.A., Chan S.J., Chen K.C., Chen Y.K., Wu H.W.,
RA   Yeh S.D.;
RT   "Potential threat of a new pathotype of Papaya leaf distortion mosaic virus
RT   infecting transgenic papaya resistant to Papaya ringspot virus";
RL   Phytopathology 98(7):848-856(2008).
XX
RN   [2]
RP   1-1918
RA   Bau H.-J., Kung Y.-J., Raja J.A.J., Chan S.-J., Chen C.-H., Chen Y.-K.,
RA   Wu H.-W., Yeh S.-D.;
RT   ;
RL   Submitted (05-JUN-2007) to the INSDC.
RL   Department of Plant Pathology, College of Agriculture and Natural
RL   Resources, National Chung Hsing University, 250, Kuo-Kuang Road, Taichung,
RL   Taichung 402, Taiwan
XX
DR   MD5; c49fa354e010f12f5c9688956dedc75c.
DR   EuropePMC; PMC4213569; 25337891.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1918
FT                   /organism="Papaya leaf distortion mosaic virus"
FT                   /isolate="TW-P-WF"
FT                   /mol_type="genomic RNA"
FT                   /country="Taiwan"
FT                   /isolation_source="infected papaya plant"
FT                   /PCR_primers="fwd_seq: tgygaygcbgatggytc, rev_seq:
FT                   attbtcdatrcacca"
FT                   /PCR_primers="fwd_seq: agtccgctcttgatgctgg, rev_seq:
FT                   tttttttttttttttttt"
FT                   /db_xref="taxon:46917"
FT   CDS             <1..1710
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A6ZII4"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:A6ZII4"
FT                   /protein_id="ABR57323.1"
FT                   /translation="CDADGSRFDSSLTPYLLNAVLGIREFFMEEWDIGVQMLRNLYTEI
FT                   IYTPIATPDGTVVKKFRGNNSGQPSTVVDNTLMVCICVQYSLIMNNVEFENQDGVCRYF
FT                   VNGDDLLLAINPKFIHILDSFKVHFANLGLDYDFSHRTKDKGELWFMSHKGVKLNDMYI
FT                   PKLEPERVVSILEWDRSVKPEHRLEAICASMIEAWGYPKLTHEIRKFYAWVLEQAPYNH
FT                   LASEGKAPYISETALKRLYTCEEGSADEIISYLEMCANDLDEDEYFDDEGVSHQSALDA
FT                   GKPTAENKTDDGEKKSKEEKQENKNKNKEVEKKHEKTSSSASGAIVSNSERDKDVDVGS
FT                   SGSFIIPRIKSISSKLTMPKVKGKGILNLEFLLQYTPDQVDISNTRASTSQFNTWYNAV
FT                   KGSYGVSDEGMGIILNGLMVWCIENGTSPNINGMWFMMQGEEQIEYPLQPIVENAKPTL
FT                   RQIMAHFSNVAEAYIEKRNYEKPYMPRYGIQRNLTDMSLERYAFDFYEMTSRTPARARE
FT                   AHIQMKAAALRNANNKMFGLDGKVGNATENTERHTADDVNHNTHTFTGARYY"
FT   mat_peptide     <1..828
FT                   /product="putative RNA polymerase"
FT                   /note="NIb"
FT   mat_peptide     829..1707
FT                   /product="coat protein"
FT                   /note="CP"
XX
SQ   Sequence 1918 BP; 619 A; 336 C; 449 G; 514 T; 0 other;
     tgtgatgctg atggctcacg atttgacagt tctcttacac catacttgct gaatgcagtg        60
     ctcgggatta gggagttttt catggaagaa tgggacatag gcgtgcagat gcttcgaaat       120
     ttgtacactg aaataattta cacccccatt gcaacacctg atggaacagt cgtcaaaaag       180
     tttcgaggaa ataatagtgg tcaaccttca acagtcgtag ataatacatt aatggtctgt       240
     atttgtgtgc agtatagttt gattatgaat aatgtagagt ttgagaatca ggatggtgtc       300
     tgcagatatt tcgttaatgg tgacgatcta ttgcttgcga tcaatccaaa atttatacac       360
     atcttagatt cttttaaagt ccattttgct aatttaggtt tagattacga tttctctcat       420
     cgaacgaaag acaaaggaga gctttggttt atgtcccaca aaggagttaa gttaaatgac       480
     atgtatattc caaagttgga gccagagagg gttgtctcaa tacttgagtg ggatagaagt       540
     gtaaagccag aacacagatt agaggcgatt tgcgcttcaa tgattgaagc atggggttac       600
     cctaagttga cccacgaaat tcggaaattt tatgcttggg ttctggaaca agcaccatac       660
     aatcatctcg catctgaggg gaaggcacca tacatttcgg aaacagcact caaaagactt       720
     tacacatgcg aggaaggaag tgccgatgaa attatatcat acttagagat gtgtgcaaat       780
     gatttggacg aagatgagta cttcgatgat gaaggtgttt ctcaccagtc cgctcttgat       840
     gctggcaaac ccacagcaga aaacaagaca gacgatggag agaagaagag taaagaagaa       900
     aagcaggaaa ataaaaacaa aaataaagaa gttgagaaga aacatgagaa aacttcaagt       960
     agcgcatctg gtgctattgt ttcaaacagc gagagagaca aggatgtcga tgtaggatca      1020
     agcggatctt tcattatacc acgaattaaa tcgatatcca gtaaactcac aatgccaaaa      1080
     gtaaaaggga aaggaatttt aaatttggag ttccttttac agtacacacc agatcaagtg      1140
     gacatttcga acacaagggc aagtacttca cagtttaaca catggtacaa tgctgtgaag      1200
     ggatcctatg gtgtatctga tgaaggaatg ggaataattt tgaatggatt aatggtttgg      1260
     tgtattgaaa acggaacatc tccgaacatt aatggcatgt ggtttatgat gcaaggggaa      1320
     gaacagatcg aataccccct tcaaccaata gtggaaaacg caaagccaac tttgcgtcag      1380
     attatggctc actttagcaa tgttgctgaa gcatacatcg aaaagagaaa ttatgagaag      1440
     ccatatatgc cgaggtacgg tattcaacgg aacctcaccg acatgagttt ggagcgatat      1500
     gcttttgatt tctatgaaat gacatcaagg acgccagctc gggcccggga agcccacatc      1560
     cagatgaaag ccgcagcctt gcgaaatgca aataataaga tgtttggact ggatggaaaa      1620
     gtcgggaatg cgactgagaa cacggagcgc cacactgcgg atgatgttaa tcataacact      1680
     catacattca ctggcgctcg atattattag atatttatct aagcatggtt ttatctagta      1740
     tttttaaatc gcattagctt tactttctag cacgtgttag tgaggtttta cctcctatta      1800
     cctatgtgtc agtgagggta gccctcgtgt gatctcttag aaagtattgt cccaagctgc      1860
     agtggctggt tgttcatagc atgagtggct catggaactc cagactaagc aaggaggg        1918
//