ID EF646763; SV 1; linear; viral cRNA; STD; VRL; 6559 BP. XX AC EF646763; XX DT 12-DEC-2007 (Rel. 94, Created) DT 12-DEC-2007 (Rel. 94, Last updated, Version 1) XX DE Prospect Hill virus segment L, complete sequence. XX KW . XX OS Orthohantavirus prospectense OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Hantaviridae; Mammantavirinae; OC Orthohantavirus. XX RN [1] RP 1-6559 RA Song J.W., Gu S.H., Bennett S.N., Arai S., Puorger M., Hilbe M., RA Yanagihara R.; RT "Seewis virus, a genetically distinct hantavirus in the Eurasian common RT shrew (Sorex araneus)"; RL Virol J 4:114-114(2007). XX RN [2] RP 1-6559 RA Arai S., Nerurkar V.R., Bennett S.N., Song J.-W., Yanagihara R.; RT ; RL Submitted (04-JUN-2007) to the INSDC. RL John A. Burns School of Medicine, University of Hawai'i, 651 Ilalo St, RL Honolulu, HI 96813, USA XX DR MD5; 6924c7eafff690c83f523ba405d0235e. DR EuropePMC; PMC2186316; 17967200. DR EuropePMC; PMC2262106; 18217572. DR EuropePMC; PMC2262799; 18256444. DR EuropePMC; PMC2702001; 19582155. DR EuropePMC; PMC3147906; 21632770. DR EuropePMC; PMC3557881; 23171649. DR EuropePMC; PMC3837639; 24209605. DR EuropePMC; PMC4054438; 24741077. XX FH Key Location/Qualifiers FH FT source 1..6559 FT /organism="Orthohantavirus prospectense" FT /segment="L" FT /host="Microtus pennsylvanicus" FT /strain="PH-1" FT /mol_type="viral cRNA" FT /country="USA" FT /db_xref="taxon:3052492" FT CDS 37..6504 FT /codon_start=1 FT /product="RNA-dependent RNA polymerase" FT /note="large protein" FT /db_xref="GOA:A9UB78" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR016268" FT /db_xref="InterPro:IPR024378" FT /db_xref="UniProtKB/TrEMBL:A9UB78" FT /protein_id="ABV02943.1" FT /translation="MEKYTEIHRRVKDAVPGEVSAVECLDLLDRLYAVRHDVVDQMIKH FT DWSDNKDTERPIGHVLLMAGVPNDVIQSMEKKVIPGSPSGQILRSFFRMTPDNYKITGN FT LIEFVEVTVTADVARGVREKVAKYQAGLTYVEELLRQEYERGNLGGSYQIKFDVVAVRT FT DGSNISTQWPSRRNDGVIQTMRLIQADINFVREHLIKAEERGALEAMFNLKFHVGGPKA FT RTFDVPDYRPQALCNPNIDGLLDHCKKWLTHEHAFAFEEVQGGKVFNAFQQEESVHKER FT YNPSRKPRNFLLMQGTIQGPYMPSTIASDQYDSRVGCLELLRNYPETPVQKLVGDMAYK FT YISLDKDDILNYYNPRAYFKPTSNVKEPGTFKLNLSAMDPKSRALLDIISKDSKKGIFG FT EKIDSIEIDSQIQLNDCAKVIEKILSDLEINVGESHVQIDEPKKTTGVDDILKKFYDNE FT IVRYLLTIIRKTTAWHLGHLFRDITESLIAHAGLKRSKYWSVHGYNHGNILLFILPSKS FT LEVAGSYIRFVTVFKDGIGLIDRDNLDSTVLIDNTAWCFSKVMSLDLNRLLALNISFEK FT ALLATATWFQYYTEDQGHFPLQHALRSVFAFHFLLCMSQKMKLCAIFDNLRYLIPAVTS FT LYSGFRPLISKFFERPFKSALEVYIYSIVKTLLVSLAQNNKIRFYSKVRLLGLTIDQST FT VGASGVYPSLMSRVVYKHYRSLISEATTCFFLFEKGLHGNLTEEAKIHLETVEWARKFK FT SKEVKYGEYIMEEGYTIQDVLDHNVEVEQQLFCQEAVELAAFELNQYLQAKSQVMAANI FT MNKYWDRPYFSQTRNISLKGMSGSLQEDNHLSASVTLIEAIRYLNQSQHNPTILEMYEQ FT TKQQPAKARIVRKYQRTEADRGFFITTLPTRVRLEIIEDYFDAIAKVVPEEYISYGGER FT KILNIQQALEKALRWASGESEIQASVGHVIKLKRKLMYVSADATKWSPGDNSAKFRRFT FT QALYDGLRDDKLKNCVVDALRNIYQTEFFMSRKLHRYIDDMDDLSEFVDDFLSFFPNKV FT SAMIKGNWLQGNLNKCSSLFGVAMSLLFKRVWSMLYPELDCFFEFAHHSDDALFIYGYL FT EPFDDGSDWFKFVSQQIQSGHLHWYAVNTEMWKSMFNLHEYILLMGSIKISPKKTTVSP FT TNAEFLSTFFEGCAVSIPFVKILLGSLSDLPGLGYFDDLAAAQSRCVKALDMGACPQLA FT QLAIVLCTSKVERLYGTAKGMVNNPTAFLKVDRSQVPIPLGGDGSMSIMELATAGIGMA FT DKNILKNSYISYRHTRKDTDRYILGLFKFLMSLSEDVFQHDRLGEFSFVGKVQWKAFTP FT KAEFEFYDQYSNRYIQLWTEQHPVYDYIIPRGRDNLLVYLVRKLNDPSIITAMTMQSPL FT QLRFRMQAKQHMKVCRLNSEWVTFREVLAAADSFASQYRPTRTDLELFQTLVNCTFSKE FT YAWRDFLNEVKCDVINVRQVHRPKVARTFTVKERDQSIQNPIMAVIGYKYANSVDEISD FT VLDSAIHPDSLSTDLQLMKEGVYRELGLDISDPLVLKRVAPLLYKSGKSRVVIVQGNVE FT GTAESICSYWLKSMTLIKTIKVRPKKEVLKAVSLYGHKDKIGNLTYIAAMRLCIEVWRW FT AKVNEQSPEGWLRALYFESKTLLDWVHDFTSKGIIPVDPEIQCLGLLLNDLFGNKSLLQ FT MHANRRAYSGKQYDAYCVQTYNEETKLYEGDLRVTFNFGMDCARLEIFWDKKEYILETS FT ITQRNVLKLMMEEVTKELLRCGMRFKTEQVNSSRSLVLFKTESGFEWGKPNVPCIVFKH FT CALRTGLRTKATVKKPFNITIQANGFRAMAQLDEDNPRFLLAHAYHNLRDVRYQALQAV FT GNLWYKTAQHKLFINPIVSAGLLECFMKGLPAAIPPAAYSLIMNKAKISVDLFMFNELL FT ALINPQNVLNLDGIEETSEGYSTVTTISSTSWSEEVSLTMDDSDDDEPEQPNYTIDLDD FT IDFETINLEEDIEHFLQDESAYTGDLLIQAEDTEVKRLRGITRVLEPIKLIKSWVSKGL FT AIDKVYNPIGIVLMARYMSKHFDFNKIPLALLNPYDLTEFESVVKGWGETVNDNFIEYD FT REAQKKVQEEKVLPEDVLPDSLFSFRHVDILLKRLFPRDATASFY" XX SQ Sequence 6559 BP; 2118 A; 1102 C; 1455 G; 1884 T; 0 other; tagtagtaga ctccgagata gagaagtcta ctaaaaatgg agaaatacac agaaatccac 60 aggagggtga aagatgctgt tccaggagag gtatcagcag tagagtgcct tgatctgttg 120 gataggctct atgctgtgag acatgatgtg gtcgatcaaa tgataaaaca cgactggtca 180 gacaataagg acactgaaag gccaattggt catgtgctgt taatggcagg agtgcccaat 240 gatgtaatcc agtctatgga gaagaaagtt atcccgggga gtccaagtgg tcagatcctg 300 aggtcatttt tccggatgac acctgacaac tataaaatta caggtaattt gattgagttt 360 gtggaagtga cagtgacggc agatgtggct agaggagttc gagaaaaggt agcaaagtat 420 caagctggcc taacatatgt tgaagaactg ttgaggcaag aatatgagag aggaaaccta 480 ggcggaagtt atcaaataaa attcgatgtt gtagcagttc gtacagacgg gtcaaacata 540 tcgacacagt ggccaagtag gagaaatgat ggagtaatac agacaatgag actcattcag 600 gctgatatta attttgtgag agaacatctg ataaaggcag aggaaagagg tgccctagaa 660 gcaatgttta acctgaaatt tcatgtaggt ggacctaagg caaggacctt tgatgtgcca 720 gactatcggc cacaagcatt atgcaatcca aacattgacg ggttgttaga tcactgtaag 780 aagtggctta cacatgagca tgcatttgca tttgaggagg tgcaaggggg taaagtattt 840 aatgcatttc aacaggaaga atcagttcat aaagaaaggt ataacccatc aagaaagcct 900 aggaattttt tattgatgca aggaacgatt caaggcccat atatgccaag tactatagca 960 tctgatcaat atgattctcg agttggttgt ctggaactgt tgaggaacta cccagaaaca 1020 ccagtccaaa agttggtagg tgatatggcc tataaataca tatcattgga caaagatgac 1080 atcttaaatt attacaatcc tagggcatac tttaagccaa catctaatgt taaagaaccg 1140 ggaacattca agctaaattt gtcagcaatg gatcctaagt cccgagcact tctggacatt 1200 atatctaaag attcaaagaa aggtatattt ggagagaaaa ttgatagtat agagatagac 1260 agtcaaatcc agttgaatga ttgtgcaaag gtgatcgaaa agattctatc tgatttagag 1320 attaatgtcg gagagtcaca tgtacagatt gacgaaccca aaaagacaac aggtgttgat 1380 gatatattaa agaaattcta cgacaatgag atagtcagat atttactgac aataattaga 1440 aagaccactg cttggcatct aggacatctt ttccgagata tcacagaaag tcttatagca 1500 catgcagggt tgaaaaggtc taaatattgg tctgtccatg gttacaacca cggaaatata 1560 ttattattta ttctcccatc aaaatcattg gaagttgctg gctcatatat taggtttgtg 1620 acagtattta aagatgggat cggacttata gatagggata atttagattc aacagtacta 1680 atagacaaca cagcctggtg tttcagtaaa gttatgagcc ttgacttgaa ccgtctgctg 1740 gcgttgaata tttcctttga aaaggcttta cttgcaacag caacttggtt tcaatattat 1800 acagaagacc aaggtcattt cccgcttcaa catgcattac gatcagtgtt cgcatttcat 1860 tttttattgt gtatgtccca aaaaatgaaa ttgtgtgcta tcttcgacaa cctgaggtat 1920 ctgatcccag ctgtgacatc actttattca ggattccggc cattgatttc taagtttttt 1980 gaacggccat ttaaaagtgc attagaggtt tacatttact ccattgtcaa aaccttgctg 2040 gttagccttg cacagaataa taaaataagg ttttattcta aagttcgact ccttggtctt 2100 actatagatc agtctacagt tggtgcaagt ggcgtctatc catcattgat gtctcgggtt 2160 gtttataagc attatcgtag tttgatctct gaggcaacta catgcttttt cttgttcgag 2220 aaaggacttc atggaaatct aactgaggaa gctaagatac atctggagac agttgagtgg 2280 gcaagaaagt tcaagtctaa ggaagtaaaa tatggggagt atattatgga agaaggttat 2340 accattcagg atgtcctaga ccataatgtt gaggtagaac agcagttatt ctgtcaagaa 2400 gcagttgagc tggcagcttt tgagttaaat caatacttac aggcaaagtc ccaagttatg 2460 gcagctaata taatgaacaa gtattgggat aggccatatt tcagtcagac ccgcaatatc 2520 agcttgaaag ggatgtctgg ttcattgcaa gaggacaacc acctatctgc gagtgtaacc 2580 ttaattgagg ctatacggta cctaaaccag agtcagcata accctacaat attagagatg 2640 tatgaacaga caaaacagca gcctgcaaaa gctcgtattg taagaaagta tcaacgtaca 2700 gaagcagata gaggtttttt tataacgacc ttgccaacac gtgtacggtt agaaataata 2760 gaagactact ttgatgctat agctaaagtt gtaccagaag agtacatttc ttatggtggt 2820 gagagaaaga ttcttaatat ccagcaagca ctagaaaagg cattaaggtg ggcatcagga 2880 gaaagtgaaa tacaagcaag cgttgggcat gttataaagc ttaagaggaa gttaatgtat 2940 gtaagtgcag atgccacaaa atggtcacca ggggacaact cagccaaatt cagaaggttc 3000 actcaggctt tgtatgatgg gctacgagat gacaagttga aaaactgtgt cgttgatgcc 3060 ttacggaata tctaccagac tgagtttttt atgtccagaa aattgcatag gtacattgat 3120 gatatggatg atctgtctga atttgtagat gactttttat cttttttccc taataaggta 3180 tctgcaatga taaagggaaa ttggctccaa ggaaatttaa ataaatgctc ttcgctattt 3240 ggtgtggcca tgtcattatt atttaaaagg gtttggagca tgctgtatcc tgagttagac 3300 tgtttctttg aatttgcaca tcattcggac gatgcactgt ttatatatgg ttatttagag 3360 ccatttgatg atgggagtga ctggttcaag tttgtttctc agcagataca atcaggtcat 3420 ttacactggt atgctgtaaa tacagaaatg tggaagagta tgtttaacct tcatgagtac 3480 atcttgctta tgggttctat taagatatcc ccaaagaaga caacagtttc tccaactaat 3540 gcagagttct tgtcaacatt ttttgagggt tgtgctgtct caattccctt tgtaaagatt 3600 ctattaggtt ctctttcaga cttacctggt ttaggttatt ttgatgatct agcagcagca 3660 caaagtaggt gtgttaaagc attagacatg ggtgcatgtc cacagcttgc tcaacttgca 3720 attgttctct gtacaagtaa ggtcgaaagg ctatatggga ctgcaaaagg tatggtaaac 3780 aaccccacag cctttttgaa agtagatcgg agtcaagtgc ccattccatt gggaggtgac 3840 ggttctatgt ccatcatgga acttgccaca gctggtatag ggatggctga caaaaatatt 3900 cttaagaatt catatatctc atatcgtcat actagaaagg acacagaccg gtatatatta 3960 ggccttttta aattcttaat gagtttatca gaggatgtat ttcagcatga caggttaggc 4020 gaattcagtt ttgtgggtaa agttcaatgg aaagcattca caccaaaggc tgaatttgaa 4080 ttttacgatc aatattctaa tagatacatt caactttgga cagaacaaca ccctgtttat 4140 gattacatca taccacgtgg aagagacaat ttattagtgt atttagtccg taaactcaac 4200 gatcccagta tcatcactgc aatgacaatg caatcaccac tacaattacg attccgaatg 4260 caagcaaaac agcatatgaa ggtatgtagg ttgaattcag aatgggtaac atttagggag 4320 gtcttagccg ctgcagactc ctttgcatcg cagtataggc cgacaaggac tgatttggaa 4380 ttatttcaga cactagtaaa ctgcactttt tcaaaagaat atgcctggcg tgattttttg 4440 aatgaggtaa agtgtgatgt gattaatgta cgacaggttc atcggcctaa agtggcaaga 4500 actttcactg ttaaagaaag ggatcaatcg atccaaaatc caataatggc agtgataggt 4560 tacaaatatg caaattctgt agatgagatt agtgatgtgt tagacagtgc aatccaccct 4620 gattccttat caactgacct tcagcttatg aaagaaggag tatataggga attaggccta 4680 gatatcagtg atcccttagt attgaaacga gttgcaccac tactgtataa atcaggaaaa 4740 tccagagttg taattgtgca aggcaatgtt gagggaactg ctgaatcaat atgtagttat 4800 tggttgaaat ctatgactct aatcaagact atcaaggtca gaccaaaaaa ggaagttctt 4860 aaggctgtat ccctatatgg ccataaagat aaaatcggca acttaacata tattgcagca 4920 atgagattat gcattgaagt atggcggtgg gcaaaagtta atgagcaaag tcctgaaggt 4980 tggttgaggg ctctatattt tgagtcaaaa acactgctgg attgggtcca tgattttaca 5040 agtaaaggta ttattccagt agatccagaa atacagtgct tgggtttatt attaaatgat 5100 ttatttggga ataagagtct actccagatg catgcaaata gaagagcata ttcaggaaag 5160 caatatgatg cttattgtgt tcagacctat aatgaagaaa caaaactgta tgaaggggac 5220 ctcagagtaa cattcaattt tgggatggat tgtgcacgtc ttgaaatctt ttgggacaag 5280 aaggaataca tccttgaaac atctattaca caacgcaatg ttttgaaact gatgatggag 5340 gaagtgacaa aggagttact tcgatgtggg atgcgattta aaacagaaca ggtcaattca 5400 tctcgaagtc ttgttctatt caaaacggaa tctggctttg aatgggggaa acctaatgtt 5460 ccatgcatcg tatttaaaca ttgtgctcta cgtactgggc ttagaacaaa agcaacagtg 5520 aaaaaaccat tcaatataac aattcaggcc aatggattta gagcaatggc ccagttagat 5580 gaagataacc cgaggtttct attagcacat gcttatcata atcttagaga tgtgaggtat 5640 caagccttgc aagcagtagg gaacttatgg tacaagactg cacagcataa attattcatt 5700 aatccaatag tatcagcagg gcttctagag tgcttcatga aaggactccc agctgcaata 5760 ccacctgcag cgtactcatt gataatgaac aaggccaaga tttctgttga cctttttatg 5820 ttcaatgagc ttttggccct tataaacccg caaaacgtcc ttaatcttga tgggattgag 5880 gagacatctg aaggttatag tactgttaca acgatctcca gcacaagttg gtcagaggag 5940 gtgagtctaa caatggatga tagtgatgat gatgaaccag agcaaccgaa ctatactata 6000 gacctagatg acattgattt tgaaacaata aacctagagg aagatattga gcactttctc 6060 caagatgagt cagcatacac tggggatttg ctcatacagg cagaagatac ggaggtcaag 6120 cgactccgag gtattacaag ggttttagaa ccaattaaac tgataaaaag ttgggtttcc 6180 aagggtctag ccattgacaa agtttataac ccgattggga tagttctaat ggcacgatac 6240 atgtctaagc actttgactt taataagatc ccattagcgc tccttaaccc atatgattta 6300 acagagtttg agagtgttgt caaggggtgg ggagaaacag taaatgataa ttttattgag 6360 tacgatagag aagctcagaa aaaggtacaa gaggagaagg tgctgcctga agatgtgttg 6420 ccagactcat tgttttcttt ccgccatgtc gatattcttc ttaagcgtct tttccctagg 6480 gatgcaactg catcatttta ttaatttctg cattgcctgt cttttcttct atttgctctt 6540 ttctcggagc atactacta 6559 //