ID EF641807; SV 1; linear; mRNA; STD; VRL; 6570 BP. XX AC EF641807; XX DT 24-OCT-2008 (Rel. 97, Created) DT 03-JUN-2009 (Rel. 101, Last updated, Version 2) XX DE Imjin virus strain Cl 04-55 RNA-dependent RNA polymerase mRNA, complete DE cds. XX KW . XX OS Imjin virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Hantaviridae; Mammantavirinae; Thottimvirus; OC Imjin thottimvirus. XX RN [1] RP 1-6570 RX DOI; 10.1073/pnas.0808942105. RX PUBMED; 18854415. RA Arai S., Ohdachi S.D., Asakawa M., Kang H.J., Mocz G., Arikawa J., RA Okabe N., Yanagihara R.; RT "Molecular phylogeny of a newfound hantavirus in the Japanese shrew mole RT (Urotrichus talpoides)"; RL Proc. Natl. Acad. Sci. U.S.A. 105(42):16296-16301(2008). XX RN [2] RP 1-6570 RX DOI; 10.1128/JVI.00371-09. RX PUBMED; 19357167. RA Song J.W., Kang H.J., Gu S.H., Moon S.S., Bennett S.N., Song K.J., RA Baek L.J., Kim H.C., O'Guinn M.L., Chong S.T., Klein T.A., Yanagihara R.; RT "Characterization of Imjin virus, a newly isolated hantavirus from the RT Ussuri white-toothed shrew (Crocidura lasiura)"; RL J. Virol. 83(12):6184-6191(2009). XX RN [3] RP 1-6570 RA Song J.-W.; RT ; RL Submitted (01-JUN-2007) to the INSDC. RL Department of Microbiology, College of Medicine, Korea University, 126-1, RL Anam-dong, 5-Ga, Sungbuk-Gu, Seoul 136-705, Korea XX DR MD5; 5de1ec8723e54d963d480910919ebf62. DR EuropePMC; PMC2687366; 19357167. DR EuropePMC; PMC3046926; 21303516. DR EuropePMC; PMC3557881; 23171649. XX FH Key Location/Qualifiers FH FT source 1..6570 FT /organism="Imjin virus" FT /segment="L" FT /host="Crocidura lasiura" FT /lab_host="Vero E6 cells" FT /strain="Cl 04-55" FT /mol_type="mRNA" FT /country="South Korea" FT /isolation_source="lung tissue" FT /db_xref="taxon:467989" FT CDS 45..6494 FT /codon_start=1 FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:B6RD48" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="UniProtKB/TrEMBL:B6RD48" FT /protein_id="ABV21394.1" FT /translation="MQKYYEIRDKVHGIEPGTIGAVECINLLDSLYMVRHDLIDEMIKH FT DWSDNKDKETPIADVLLKAGIPAEIINGMEKVRIVDHPAGKTLKQFFKTTPDNYKISNN FT VIHFIEVTVTVDVEKGIYEKNQKYQGGLNQIQQELDKAWHQGKLQHKFELKFDIVAVKA FT DGSNLSTQWPSTRSQGVVQHMRMVQAEIQYVRDKLLSTQERGTFESMFNLKFHTHTERE FT FKYTLPSYEDVEDCDANLDELLDHTKEWLTKKQSFSFHEVTGEKVTKSFELYEKDQQTM FT YPKSKKPRNFLLLPVGIQSEYKPMTIYMSQVDTKLVANIILSELPETPLQSLVKDICYS FT YMMLDNVEINNYYSPVHIFEKTKNIPQPGCLKINIGLFDEGAKAILSQTKQEANGVQQI FT ESLHPWNHSESITSMSIIEHILSQLEINIGVDPDDMTTYRKRSPVDSLLGRLMQSETEK FT YLIKVLRKTVGWHIGHLIRDITEALVAHAGLKRPKYHSISGFHHGNVLLVMLPSKSLEV FT ASAHVRYIIVHKEGYGFVDPDNIDSKKIINGTCWIYSKAMTIDLNRLLALNISFEKAFL FT ATAVWFQYFTEDQSIFPLQSTVKSVFSYHLLLAVTQKMKVCALFDNLRYLIPSCTASYS FT GADSLIEKFCKRPFKSSIEVYVYNKAKELLISLAQNNKFRYYSKVRLLGLTVDQSSVGA FT TGIYPSLICHTVYRHYKSLISEITTCFFLFEKGLHGTMTEEAKIHLETVEWAQKFKQKE FT SDYGKDIVENGYSLSMVIKNEIKPEQQLYCKDVVKLATIELNKVLSSKGQVIANSIMSK FT YWETPYFSQTRNISLKGMSGEIQEDGHLASSYTLIEAIRYLNTHKRNPTVLELYAETKD FT IRAQARIVRKHQRTEADRGFFITTLPTRVRLEIIEDYYDSISKNVQEEYISYGGEKKIL FT QIQGSLEKALRWASGTSVITLSTGDQITFKRKLMYVSADATKWSPGDNSAKFRLFSSHI FT HDGLKDKRLKRCVIDALRGIYETEFFLSRRLRGYIDNMNYLEMNVKEFLSFFDHVEERS FT GLVRGNWLQGNLNKCPSLFSVAISFLFKEVWAQLFPELDCFIEFAHHSDDALFIYGYLE FT PEGDASEWFLYVSQKIQAGQLYWCSVNTEMWKTMFNLHEYLLLLGSVKVSPKKTTVSPT FT NAEFLSTFFEGCAVSIPFSKILLGALSDLPGLGFFDDLAASQSRCVKALDMGASPQIAQ FT IAVNLTNSKVERLYGTASGMANYPCNFINVNRDKIPICLGGTGSSSILDLATAGIGMSD FT KMILKNALLGYKHKHNPEDTYILGIFKFLITLSEETFQHESLGEFSFLGKVQWKIFTPK FT SEFEYASLFGNKFLGDWSIDHPVYDYIIPQLRDDLLVYLVRKLNDPSIVTAMTLQSPLQ FT LRFRMQAKQHMPVCKYKGSWVTFRTILNAAHEFAVEYKPTENDLDLFNTLISCTFSKEF FT AWKDFIGNTECEVIQSRKIHRPKVARVFTVKERDQIIQNPISVVIAYKFAQTTSEIKDV FT LDKAKFPDSLSSDLKTLHEGVYRELGLNINDPLVMKRIAPMLYKTGRSRIVIVNGNVEG FT TAEAICTYWLRSISFVKQIKIIPHCEVLKAVSIFSKSDFVRDDTQLAALRLCIDIWRWG FT KYNYVNLQEWFSALWFESKTLWDWLYHFQRKGVPVVDPEVQCAGLMMYDMLRDSTTLQL FT HANRRAYSGKQYDAYCTQVYNEESGLYEGDLRVVFNFGVDCARLEIFWDKQTYILETSI FT TSKPVLRVLMQEVTTELQKCGMKFNTIQSTGYRSVVLFKTDSGFEWGKPNVPCVIFLNC FT ALRPNLRNRQVLNKDFMITILDNGFKAIAQQDEESNRFQLAHAYHNLKDVRYQAIETMN FT NVYFTHEGKNLYINPIIAAGLLENFMKGLPAVIPPQAYSLIMKKAKITVDLFMFNKLLS FT LINPRNVFNMDGIDNDYPEFSTVTSLSTKDWAEEKELEDAEVDDDEYVVDLNDIDFDKV FT DTLADIQHFLQDESAYTSDLIIDTEPTEAKRIRGIVKLVEPVKLIKSWVSKGLAIEKVY FT NPLAIILVTRYFSKQYSFSKVPLAQLDPYNLTELESIVRGWGELVCDRFEELDQQAHEY FT ILKTKEPPQNLVPDSLFSFRHAELLFSRLFLPDTVSAFY" XX SQ Sequence 6570 BP; 2270 A; 992 C; 1288 G; 2020 T; 0 other; tagtagtata ctccggaaat tgacaataac agaaagagta tactatgcag aaatattatg 60 agatcaggga caaggtccat ggcatagagc caggcacaat aggagcagta gaatgtatta 120 atttgctaga ttcactttac atggtccgcc atgatctaat tgatgagatg ataaaacatg 180 actggtctga taataaagat aaagagacac ctattgcaga tgtactattg aaagctggca 240 tccctgctga aataataaat ggtatggaga aggtaaggat tgttgatcac cctgcaggaa 300 aaacacttaa gcaattcttt aaaacaaccc ctgacaatta caagatttcc aataatgtga 360 ttcatttcat tgaagttact gttacagttg atgtcgaaaa gggaatttat gagaaaaatc 420 aaaagtacca aggtggattg aatcaaatac aacaggagtt agataaagcc tggcaccaag 480 gtaagttaca acacaaattt gagttaaaat ttgacattgt tgctgtaaag gctgatggtt 540 ctaatctatc aacacaatgg cccagtacaa ggtcacaagg ggttgtccaa catatgagaa 600 tggttcaggc tgaaattcag tatgtaagag ataagttatt aagcacccaa gagcgtggta 660 cttttgaatc aatgtttaac ttaaagttcc acacccacac tgaaagagaa tttaaatata 720 ctctcccatc atatgaggat gttgaggact gtgatgctaa tcttgatgaa ttattagacc 780 acacaaaaga atggttaaca aaaaaacagt cattttcgtt ccatgaagtt actggagaaa 840 aggtcacaaa atcatttgag ttatatgaga aagatcaaca aactatgtat ccaaagtcaa 900 agaaacctag gaacttccta ttactaccag tcgggataca gtcagaatat aaacctatga 960 caatatatat gtcacaagtc gatactaagt tggtagctaa cattatttta agtgaattac 1020 ctgaaacacc attacaatct ctggtaaaag acatatgtta tagctatatg atgttagata 1080 atgtagagat aaataattat tatagtccag ttcatatctt tgaaaaaacc aaaaatatac 1140 cacaacctgg ttgtttaaag ataaatattg gattatttga tgaaggggct aaagccatat 1200 tgagtcaaac taagcaagag gcaaatggtg tccagcaaat agaaagttta catccatgga 1260 accattctga gtcaattaca tctatgagta taatcgaaca tattttgtca caactagaga 1320 ttaacatagg agtggaccct gatgacatga ctacatacag gaaaaggtca cctgtggatt 1380 cactattagg tcgcctcatg cagagtgaaa cagaaaaata tctaataaaa gtattacgga 1440 aaactgtagg ttggcacata ggacatttaa ttagagatat aactgaggca ttggttgcac 1500 atgctggttt aaagagacca aaatatcatt ctatatcagg atttcaccat gggaatgttc 1560 tacttgtaat gcttccatct aagtccttag aagtggcctc tgctcatgta agatatataa 1620 ttgtacataa agaaggatat gggtttgttg atcccgataa cattgattct aaaaaaataa 1680 taaatggcac atgttggatt tactcaaaag caatgaccat tgatttgaat cgccttttag 1740 cacttaatat aagctttgaa aaggcattcc ttgcgactgc tgtgtggttt caatatttca 1800 ctgaagatca aagtattttt ccattacagt caactgttaa gtcagtcttc tcctatcatt 1860 tattgttagc tgttacacaa aaaatgaaag tatgtgcgtt atttgacaac cttagatacc 1920 ttatcccatc atgtactgcc agttactctg gtgcagatag tttgattgag aaattttgta 1980 aaaggccatt taaaagttct atagaagttt atgtgtataa taaagcaaaa gaacttctaa 2040 taagtttggc acaaaataat aaatttcgat actactcaaa agttaggctc ttaggtttga 2100 ctgtggatca atcaagcgta ggggcaaccg gaatataccc atctttgatc tgtcacacag 2160 tttacagaca ttataaatca ttaatatctg aaatcacaac atgctttttc ttatttgaga 2220 agggcttaca tggaacaatg acagaagaag caaaaattca tctagaaaca gttgaatggg 2280 cacagaaatt taagcaaaaa gagtctgatt atgggaaaga tattgttgaa aatggttaca 2340 gtctatctat ggttataaag aatgaaataa aacctgaaca acaattgtac tgcaaggatg 2400 tggttaagtt ggctactatt gaattaaata aagtattgtc atctaagggt caggttatag 2460 caaattcaat aatgtcaaag tattgggaaa caccttattt cagtcagact cgaaacatta 2520 gtttaaaagg aatgtctggg gagatacagg aggatggtca tctagcatct agttatacac 2580 tgattgaagc aattagatat ttaaatacac ataagcgaaa tcctactgtc ttagaactat 2640 atgctgagac caaggacata agggcacaag caagaattgt gagaaaacat caacgaactg 2700 aagctgatag gggtttcttt attaccacac taccaacacg agtacgcctt gagattattg 2760 aggattatta tgattctata tcaaagaatg ttcaggaaga atacatctct tatgggggtg 2820 aaaagaagat tttgcaaatt caaggttctc tggagaaggc attaagatgg gcatctggta 2880 caagtgttat aactctttct actggggatc agataacatt caagaggaaa ttaatgtatg 2940 taagtgcaga tgcaacaaaa tggtcacctg gggacaattc tgcaaaattt agattatttt 3000 catcacatat tcatgatggg ctaaaggata aaaggttaaa aagatgtgta atagatgcat 3060 taagaggtat ttatgaaaca gagttctttt tatctaggag gcttagaggt tatatcgata 3120 acatgaacta tttagaaatg aatgtgaaag aatttttatc cttctttgat catgtagagg 3180 aacgttctgg gttggtcagg ggaaactggc tacaaggtaa tcttaataaa tgtccatcat 3240 tgttttcagt tgctattagt tttcttttca aagaggtctg ggctcagtta ttccctgaat 3300 tagattgctt tatagagttt gcacatcact ctgatgatgc attatttatt tatggctatt 3360 tagaaccaga aggtgatgct tctgaatggt ttctatatgt tagtcaaaaa atacaggcag 3420 gtcaattgta ttggtgttct gttaacacag aaatgtggaa gaccatgttt aacttgcatg 3480 aatatctctt attattagga tctgtaaaag tttcaccaaa aaagacaaca gtttcaccaa 3540 caaatgccga atttttatca acattctttg aaggttgtgc tgtatcaatc ccattctcca 3600 aaattttatt aggagctcta tctgatctgc cagggttagg cttttttgat gacttagcag 3660 cttcacaatc aaggtgtgtc aaagcccttg atatgggtgc atcacctcaa atagcacaaa 3720 ttgcagtaaa cttgactaat tcaaaggtcg aaagactgta cggaacagca tctggaatgg 3780 ccaattaccc atgtaatttt attaatgtca atcgtgataa aataccaatt tgtctaggtg 3840 gaaccgggtc atcatctatt ctagacctgg ctacggccgg aatcgggatg tctgataaga 3900 tgattttaaa gaatgctctt ttaggataca agcataaaca taatccagag gatacttata 3960 tccttggaat ttttaaattt ttaattacac taagtgagga aacatttcaa catgagagtc 4020 tgggagaatt ttctttttta ggtaaagttc agtggaagat atttacacca aagtccgaat 4080 ttgagtatgc atctttattt ggaaataagt ttttaggtga ttggagtatt gaccaccctg 4140 tttatgatta tattataccc cagttaaggg atgatctact tgtctaccta gtcagaaaac 4200 taaatgatcc gagtattgtg acagccatga cattacaatc acctttacag ttgaggttta 4260 ggatgcaagc aaaacaacat atgcctgtat gcaagtataa aggttcatgg gtaacattta 4320 gaacaatttt aaatgcagca catgaatttg ctgtagaata taaaccaact gagaatgatc 4380 ttgatttatt caatacatta atatcttgca cattttcaaa ggaattcgca tggaaagact 4440 ttataggtaa cactgaatgt gaagtcattc aatcaagaaa aatccataga cccaaagtgg 4500 cacgagtttt tactgtgaaa gaacgtgacc agattattca gaacccaatc tctgttgtaa 4560 tagcatataa atttgcacaa acaaccagtg agattaaaga tgtgcttgat aaagcaaagt 4620 tccctgattc attaagtagt gatttgaaaa cattacatga aggtgtttac agagaattag 4680 gcttgaatat aaatgatcca cttgtaatga aacgtattgc accaatgtta tataagacag 4740 gtaggtcaag aatagttatt gtaaatggga atgttgaagg gacagcagag gctatatgta 4800 cttactggtt aaggtcaata tcattcgtga aacaaataaa aataataccg cattgtgagg 4860 tattaaaggc tgtgtcaatt ttcagtaaaa gtgattttgt gcgagatgat acacagcttg 4920 cagccttaag attgtgtatt gatatttgga gatggggtaa atataattat gttaaccttc 4980 aagagtggtt ttcagcattg tggtttgagt caaaaaccct atgggactgg ttgtatcatt 5040 ttcagcggaa aggtgtccct gtagttgatc ctgaagtaca atgtgcaggt ttaatgatgt 5100 atgacatgtt aagagatagc actacattgc aattacatgc taataggcgt gcatattcag 5160 ggaagcagta tgatgcatat tgcactcaag tttataacga agaaagtggt ttatatgaag 5220 gtgatttacg tgttgttttt aattttggtg tggactgtgc aagattagag attttttggg 5280 ataaacagac ctatattctg gaaacatcaa tcacaagtaa accagttctt cgtgttttaa 5340 tgcaagaagt aactactgag ttacaaaaat gtggtatgaa gtttaataca atccagagta 5400 ctggttacag gtctgttgtc ctttttaaga ctgattcagg ttttgaatgg gggaagccta 5460 atgtaccttg tgttatattt ttaaattgtg ccttacgacc taatctaaga aatagacagg 5520 tcttaaataa agatttcatg attaccatac tggataatgg atttaaggct atagcacagc 5580 aagatgaaga aagtaacaga tttcaacttg cccatgctta tcacaacctt aaggatgtga 5640 gatatcaagc aatagagaca atgaataatg tatactttac acatgaaggg aaaaatctgt 5700 atattaatcc aattattgca gcaggtttgc tagagaattt tatgaaaggt ctaccagctg 5760 taataccacc tcaggcttat agtctcatta tgaagaaggc taaaatcact gttgacctct 5820 ttatgtttaa taagttattg tcattgatta atccaaggaa tgtatttaat atggatggta 5880 ttgacaatga ttatcctgaa tttagtacag tcactagctt atcaacaaaa gattgggctg 5940 aggaaaaaga gcttgaagat gcagaagttg atgatgatga gtatgtagtt gatttaaatg 6000 atattgactt tgataaagtt gatacattgg ctgatataca acacttctta caagatgaat 6060 cagcatatac atcagattta ataattgata cagagccaac agaagccaaa cgaataaggg 6120 gaattgttaa gctagttgag cctgtaaaat taataaaaag ttgggtatct aaaggtttag 6180 ctatagaaaa agtttataac ccattagcta ttatattagt aacacggtat ttttccaaac 6240 agtattcatt cagcaaggta ccattagctc aactggatcc ttataacctt acagagcttg 6300 agagtattgt cagaggttgg ggagagttag tttgtgatag gtttgaggaa ctcgatcagc 6360 aggcacatga gtatatactg aaaacaaaag aacccccgca gaaccttgtt cctgattcat 6420 tgttttcttt taggcatgca gagctcctat tttctagact attcttacct gacactgttt 6480 cagcttttta ttgacagcat tttgaaactc tgtcaagcca tgtattcttg taaattatat 6540 ctttgttgtt tattccggag catactacta 6570 //