ID   EF641805; SV 1; linear; mRNA; STD; VRL; 1574 BP.
XX
AC   EF641805;
XX
DT   24-OCT-2008 (Rel. 97, Created)
DT   03-JUN-2009 (Rel. 101, Last updated, Version 2)
XX
DE   Imjin virus strain Cl 04-55 nucleocapsid protein mRNA, complete cds.
XX
KW   .
XX
OS   Imjin virus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Hantaviridae; Mammantavirinae; Thottimvirus;
OC   Imjin thottimvirus.
XX
RN   [1]
RP   1-1574
RX   DOI; 10.1073/pnas.0808942105.
RX   PUBMED; 18854415.
RA   Arai S., Ohdachi S.D., Asakawa M., Kang H.J., Mocz G., Arikawa J.,
RA   Okabe N., Yanagihara R.;
RT   "Molecular phylogeny of a newfound hantavirus in the Japanese shrew mole
RT   (Urotrichus talpoides)";
RL   Proc. Natl. Acad. Sci. U.S.A. 105(42):16296-16301(2008).
XX
RN   [2]
RP   1-1574
RX   DOI; 10.1128/JVI.00371-09.
RX   PUBMED; 19357167.
RA   Song J.W., Kang H.J., Gu S.H., Moon S.S., Bennett S.N., Song K.J.,
RA   Baek L.J., Kim H.C., O'Guinn M.L., Chong S.T., Klein T.A., Yanagihara R.;
RT   "Characterization of Imjin virus, a newly isolated hantavirus from the
RT   Ussuri white-toothed shrew (Crocidura lasiura)";
RL   J. Virol. 83(12):6184-6191(2009).
XX
RN   [3]
RP   1-1574
RA   Song J.-W.;
RT   ;
RL   Submitted (01-JUN-2007) to the INSDC.
RL   Department of Microbiology, College of Medicine, Korea University, 126-1,
RL   Anam-dong, 5-Ga, Sungbuk-Gu, Seoul 136-705, Korea
XX
DR   MD5; 178e0d060619eb18839d8b04286ec227.
DR   EuropePMC; PMC2687366; 19357167.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1574
FT                   /organism="Imjin virus"
FT                   /segment="S"
FT                   /host="Crocidura lasiura"
FT                   /lab_host="Vero E6 cells"
FT                   /strain="Cl 04-55"
FT                   /mol_type="mRNA"
FT                   /country="South Korea"
FT                   /isolation_source="lung tissue"
FT                   /db_xref="taxon:467989"
FT   CDS             68..1378
FT                   /codon_start=1
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:B6RD46"
FT                   /db_xref="InterPro:IPR002214"
FT                   /db_xref="UniProtKB/TrEMBL:B6RD46"
FT                   /protein_id="ABV21396.1"
FT                   /translation="MAQSRITKEDIQKLEDAKKQIEIQLSSSIQKLATETEQFGPDPDP
FT                   IQLQAVRQRSSVIEGYKEKLRDLESQLSIAYATFADEEEERKKRKEVPGVEEGDYLSQK
FT                   SSLRYGNVIDLNPLNLEEPAGQTANWNRIFEYITTITQVLLLKGLYILTTRGRQTSKDN
FT                   KGTRMKLKDDSCMETVNGIQRHKFLYISLPTSQSSIQDDELTPGRFRTIVSGLLPNEIR
FT                   NKKLMSPVMGVIGFLNLTEVWMDLIDRIMTDQCDYMTQDKSNPTASTNRAYFKERQSTI
FT                   DSLNLPDLKQLRTDAERKHYLPDDIETECVPWIFANAPDRCPPTVLLVAGIPELGAFFA
FT                   LMQDIRSGILASNLRGTAEEKIARKSSFYQSYVRRTQSMGLNCDQKIIHIYMDYLGTFC
FT                   VDHFNLGDDMDPDLKIKAQALLDKKVKEISTQEPIKL"
XX
SQ   Sequence 1574 BP; 506 A; 311 C; 327 G; 430 T; 0 other;
     tagtagtaga ctccctgaat acaacagaag agactactac tatatataga gcttaacagg        60
     tcccaaaatg gcgcaaagcc gtatcaccaa agaggacatc caaaagcttg aggatgcaaa       120
     aaagcagatt gaaattcagc tttcttcctc aatccaaaaa ttagccacag aaactgaaca       180
     gtttgggcca gacccagacc caatacagct tcaagctgta agacaaagat ctagtgtgat       240
     agagggttat aaagaaaagc taagagatct ggagagccag ctaagtattg cctatgcaac       300
     ctttgctgat gaggaggaag aaagaaagaa gaggaaggaa gtaccaggtg ttgaagaagg       360
     tgattatttg tcccaaaagt cttcacttag gtacgggaat gtgattgact tgaaccccct       420
     taatctagag gaaccagctg ggcagactgc caattggaat cgcatctttg agtatattac       480
     tacaattact caggtacttt tacttaaggg tctttacatc ctgacaaccc ggggaagaca       540
     gacaagcaag gataataaag gaacaagaat gaagctgaaa gatgattctt gcatggagac       600
     tgtgaatggg attcagaggc acaagtttct gtacatctca ctcccaacca gtcagtcatc       660
     catccaggac gatgaattga caccaggcag attcaggaca attgtctcag gactcctccc       720
     taatgagatt cgtaataaaa agttaatgag ccctgtcatg ggtgtgattg gtttcttgaa       780
     ccttactgaa gtctggatgg atcttattga tcggatcatg actgaccaat gtgattacat       840
     gactcaagat aaatcaaatc caactgcaag tacaaatagg gcttacttta aagaaagaca       900
     aagcactatt gacagtctaa atcttcctga tctcaaacaa ctgaggactg atgcagaaag       960
     aaagcactat cttcctgatg acattgaaac tgagtgtgta ccctggattt ttgcgaatgc      1020
     acctgatagg tgtcccccaa cagtgttact tgttgcaggg atacctgagc ttggtgcatt      1080
     ctttgcatta atgcaggata taaggagtgg aatccttgca tcgaatttga gaggaacagc      1140
     tgaagaaaag attgctcgaa agtcctcatt ttaccaatca tatgttagga ggacacaatc      1200
     aatgggtcta aactgtgacc aaaagataat tcatatttat atggattatc ttgggacatt      1260
     ctgtgttgat cactttaacc tgggagatga catggaccct gatcttaaga ttaaggccca      1320
     ggccctctta gataaaaaag tgaaagaaat ctcaacacag gagcctataa aactataagc      1380
     tcttaattct tcttgtttat gtaaatagtt gcttgcttgc tcttaatcaa tcattattct      1440
     gcttactaac ctgcttgctt gcttgcttgc ttgcttacta acatgctttg cttgctacta      1500
     acctgctttg ctttcccctg ctattaaccc tcaaaagtta tctctctatt tgttgtatag      1560
     ggagcatact acta                                                        1574
//