ID EF641799; SV 1; linear; mRNA; STD; VRL; 3616 BP. XX AC EF641799; XX DT 24-OCT-2008 (Rel. 97, Created) DT 03-JUN-2009 (Rel. 101, Last updated, Version 2) XX DE Imjin virus strain Cl 04-55 glycoprotein mRNA, complete cds. XX KW . XX OS Imjin virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Hantaviridae; Mammantavirinae; Thottimvirus; OC Imjin thottimvirus. XX RN [1] RP 1-3616 RX DOI; 10.1073/pnas.0808942105. RX PUBMED; 18854415. RA Arai S., Ohdachi S.D., Asakawa M., Kang H.J., Mocz G., Arikawa J., RA Okabe N., Yanagihara R.; RT "Molecular phylogeny of a newfound hantavirus in the Japanese shrew mole RT (Urotrichus talpoides)"; RL Proc. Natl. Acad. Sci. U.S.A. 105(42):16296-16301(2008). XX RN [2] RP 1-3616 RX DOI; 10.1128/JVI.00371-09. RX PUBMED; 19357167. RA Song J.W., Kang H.J., Gu S.H., Moon S.S., Bennett S.N., Song K.J., RA Baek L.J., Kim H.C., O'Guinn M.L., Chong S.T., Klein T.A., Yanagihara R.; RT "Characterization of Imjin virus, a newly isolated hantavirus from the RT Ussuri white-toothed shrew (Crocidura lasiura)"; RL J. Virol. 83(12):6184-6191(2009). XX RN [3] RP 1-3616 RA Song J.-W.; RT ; RL Submitted (31-MAY-2007) to the INSDC. RL Department of Microbiology, College of Medicine, Korea University, 126-1, RL Anam-dong, 5-Ga, Sungbuk-Gu, Seoul 136-705, Korea XX DR MD5; 689a918c85a6ce15cee6c567e947e01a. DR EuropePMC; PMC2687366; 19357167. DR EuropePMC; PMC3046926; 21303516. XX FH Key Location/Qualifiers FH FT source 1..3616 FT /organism="Imjin virus" FT /segment="M" FT /host="Crocidura lasiura" FT /lab_host="Vero E6 cells" FT /strain="Cl 04-55" FT /mol_type="mRNA" FT /country="South Korea" FT /isolation_source="lung tissue" FT /db_xref="taxon:467989" FT CDS 41..3403 FT /codon_start=1 FT /product="glycoprotein" FT /db_xref="GOA:B6RD40" FT /db_xref="InterPro:IPR002532" FT /db_xref="InterPro:IPR002534" FT /db_xref="InterPro:IPR012316" FT /db_xref="UniProtKB/TrEMBL:B6RD40" FT /protein_id="ABV21399.1" FT /translation="MNNRLIIVLLQSLLQVYCSIHSRITLECPHYGVSDAEYVWGKVKI FT GRFAIDDIKHIQFENTCPFSITSHNIQTGMKIISWTEKETHDSSAVYFDKVATHSEKTG FT DFKSLCGSVSYLTYPFKSGNSYCLNLHCNQTVCDTEVIVFIKAISCVAYDSCVLYHKDI FT KVQLNFRKTHCVKSVLHEKKCFQPDFTTGFNPKLHMRFSLPSVCVFMPSDGNAEGTKEI FT VGQNSCTDIKLNGWYSCIVGHYSMIFVHSNGKMRQIHLNTKFRKNPQGDDHSELRSGST FT HIVGYKNMTTISNKVNTLAAFKGATDYSSLFYNIQNTDKKPLLLAGYTPTFHWRECGTH FT LIPAVWTSYIDVWGTIIESDECNIFCTLSGPGASCEAFSPTGIFLLNSTTCLIPHTHRF FT KGLGDQITFICQRVDTDLEFYCNGRHKIIRTKTLIIGQCIQTFTSFFSLFPGVAHSLAV FT ELCVPGFHGFITVCIVSTFCFGWLWIPGLTWLILQFLKFVVMFVSTNSVDQRFKQILQK FT IKAEYRLTIGDTSCDFCKHECQTSLESDSHILYCKQGKCPYCLNDIYPSPLALQEHYKV FT CMLTDRFTRQIKEKILNVEAKPHSGLYKRLCVFQYKNRCYIFTIWIFLLIFQMLVWAAS FT AEVINFEKEWNDNVHGIGSEKLITDLELDFSIPSSSGFTYTRNLEGPMPNQKIHFALKL FT SRQKTRATIQKLGHWVDARWNIRTVFHCYGACSKFEYPWKSATCNREKDFEYQTGWGCN FT PGDCPGINTGCTACGLYLDKPKSVATVVKLIQLDYEREVCIQIGTHSECKKITGNDCLS FT THGVKVCLLSTTVKLTATDTLVFFGPLQQGAVVFKNWCTSTCSYGDPGDIMLTENGEYN FT CPDFTGSFERTCRFGQTPVCEYNGNNMGGYKRYLATKDSFFSINMTDPIIDKTKLEWFD FT PDSTSRDHINVQVSKDVDFENLGNNPCRLTLKTTGIEGAWGSETGFALTCKVSLLECNS FT FVTMIKACDKAMCYGAYSTTLQRGDNTITIQGRGGHSGSSFKCCHNDDCSTAGMLADAP FT HLSRLKSQDGDNSEIYSDGANECRITCWFNKTSEWVMGMLSGNWLVILVLVGIMLFSVF FT LFCFFCPAKTHQA" XX SQ Sequence 3616 BP; 1187 A; 617 C; 724 G; 1088 T; 0 other; tagtagtaga ctccgcaatt ccaagcaata gctaaacaca atgaataaca ggcttatcat 60 tgtgttgttg cagagcctac tacaagtata ttgctctatc catagcagga ttactttaga 120 gtgtcctcac tatggcgtta gtgatgctga gtatgtttgg ggaaaagtca aaattggccg 180 ctttgcaatt gatgatatta agcatatcca gtttgaaaat acatgcccat tctctatcac 240 tagtcataat atccaaactg gtatgaagat aatatcctgg acagagaaag agacccatga 300 tagttcagca gtttatttcg ataaagttgc aacgcactct gaaaagactg gggactttaa 360 gtcactttgt ggtagtgtaa gttatcttac ataccctttt aaaagtggga actcttactg 420 cttaaactta cattgtaatc aaacagtttg tgacacagaa gtgattgtct tcataaaggc 480 tatctcctgt gttgcatatg actcatgtgt gctttatcat aaagacataa aggtccaatt 540 aaattttagg aaaacacact gtgtcaaatc agttttacac gaaaagaaat gttttcaacc 600 agatttcacc accggattta acccaaagct ccacatgcgg ttcagtttac cttcggtctg 660 tgtcttcatg cctagtgatg gtaatgctga aggtaccaaa gaaattgttg gtcaaaactc 720 atgtactgat atcaagctga atggttggta tagctgtata gttggtcatt attcaatgat 780 ttttgtacac agtaatggta aaatgaggca aatacatctt aatacaaaat ttaggaaaaa 840 tccacaaggt gatgaccaca gtgaactaag atctggttct acccatatag taggatataa 900 aaatatgact actatatcta acaaagtaaa caccctagca gcattcaaag gtgcaactga 960 ctacagctcc ttattttata atatacaaaa cacagataaa aaaccattac ttcttgcagg 1020 ttacactcct acatttcatt ggagagagtg tgggacacat ttaatacctg ctgtatggac 1080 aagttacatt gatgtctggg ggactattat agaatctgat gagtgtaata tattctgcac 1140 cttaagtggg cctggggcaa gttgtgaggc attttctcca acaggaatat ttctcttaaa 1200 ctcaacaacc tgtttaatcc cacacacaca cagatttaaa ggccttggag atcaaataac 1260 atttatatgc caacgggtag acactgatct agaattttac tgcaatggaa gacataagat 1320 aattaggact aaaacattaa ttataggtca gtgtatacaa actttcacca gtttcttctc 1380 cctatttcct ggagtcgcac attcactagc agtagagctt tgtgtcccag gctttcatgg 1440 cttcattaca gtttgtatag tatcaacctt ttgctttggt tggttatgga tccctggtct 1500 aacatggctc atattgcagt ttctaaaatt tgttgttatg tttgtgagta ccaatagtgt 1560 tgatcaaaga tttaaacaaa ttttgcaaaa gataaaagca gagtatcgat tgacaattgg 1620 tgatacaagt tgtgactttt gtaagcatga atgtcaaaca agcctagaaa gtgatagcca 1680 cattctatat tgtaagcaag gaaaatgccc atactgcctg aatgatatat acccatcacc 1740 tttagcattg caagagcatt acaaagtgtg tatgctgaca gatcgcttta cacgtcaaat 1800 aaaggagaaa attttaaatg ttgaagctaa gccacatagt gggctgtata agaggctctg 1860 tgtgtttcaa tataaaaaca ggtgttatat atttactatt tggatatttc ttttaatatt 1920 tcaaatgttg gtttgggcag ccagtgcaga agtaataaac tttgaaaagg aatggaatga 1980 taatgtccat gggataggaa gtgaaaagct tataactgac ttggaattag acttctcaat 2040 accatcatct tcaggattta catatacccg gaatctagaa ggaccaatgc ctaaccagaa 2100 gatacatttt gctttaaagt tatcaagaca gaagacaaga gccacgattc agaaactagg 2160 acactgggtg gatgccaggt ggaatattag gactgttttt cattgctatg gtgcatgctc 2220 aaagtttgag tatccatgga agagtgcaac atgtaacaga gaaaaagatt ttgagtacca 2280 gactggatgg ggttgtaatc ccggtgattg tccaggaatt aatacagggt gtacagcatg 2340 tggcttatat ttagataagc caaagtcagt agccactgtg gttaaattga tacagttgga 2400 ttatgagcgg gaggtttgta tacagatagg tactcatagt gaatgtaaga aaataactgg 2460 aaatgactgt ctcagcacac atggggtcaa ggtatgtcta cttagcacaa cagtcaagtt 2520 aactgcaaca gatacacttg tattctttgg acctctgcaa caaggtgcag tggtttttaa 2580 aaattggtgt actagcactt gctcttatgg tgatccaggg gatataatgt tgactgaaaa 2640 tggagaatat aattgccctg atttcacagg ttcttttgag agaacctgta ggtttggcca 2700 gacacctgtg tgtgaatata atgggaacaa tatgggagga tacaagagat atcttgcaac 2760 aaaagattct ttcttttcaa taaatatgac tgatcctatt atagataaga ctaaattaga 2820 gtggtttgac cctgatagta catctaggga ccatatcaat gttcaagtga gtaaagatgt 2880 tgactttgaa aatctaggaa acaatccatg taggctaaca ttaaagacta cagggataga 2940 aggtgcatgg ggctcagaaa ctggttttgc attaacctgc aaagtttccc tattagaatg 3000 taattcattc gttacaatga taaaggcatg tgataaagca atgtgctatg gggcatattc 3060 aacaactcta cagaggggtg acaatacaat aactattcaa ggaaggggtg gtcatagtgg 3120 atcaagtttt aagtgttgcc acaatgatga ctgctcaact gcaggcatgc tagcagatgc 3180 tcctcacctg tctaggttga aatctcagga tggtgataac tcagaaatat attcagacgg 3240 ggcaaatgag tgtaggataa catgctggtt caataaaaca agcgaatggg tgatgggcat 3300 gctgtccgga aattggttag tcatccttgt ccttgtgggc attatgctat ttagtgtctt 3360 tttattctgc ttcttttgcc ctgccaaaac ccaccaagca taattcacta gctatatccc 3420 ttcatactaa caatactatg tatactctag cttctaacat agcatgtata aaataaataa 3480 aaataaaata aaaaaataaa ataaaaataa aaactataaa aaatacacta actgctttat 3540 cccctaacac aaaatgtctc tagtgttaca ctagatggca tttctttgtc ttttgttctt 3600 gcggagcata ctacta 3616 //