ID EF640931; SV 1; linear; genomic RNA; STD; VRL; 3050 BP. XX AC EF640931; XX DT 02-JUL-2007 (Rel. 92, Created) DT 19-SEP-2007 (Rel. 93, Last updated, Version 2) XX DE Cucumber mosaic virus isolate TC segment RNA 2, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3050 RX DOI; 10.1099/vir.0.83138-0. RX PUBMED; 17872541. RA Ziebell H., Payne T., Berry J.O., Walsh J.A., Carr J.P.; RT "A cucumber mosaic virus mutant lacking the 2b counter-defence protein gene RT provides protection against wild-type strains"; RL J. Gen. Virol. 88(Pt 10):2862-2871(2007). XX RN [2] RP 1-3050 RA Payne T.J., Jenner C.E., Walsh J.A.; RT ; RL Submitted (31-MAY-2007) to the INSDC. RL Warwick HRI, University of Warwick, Wellesbourne, Warwick, Warwickshire RL CV35 9EF, UK XX DR MD5; f687995295055eb6f3dc2b4994dd8868. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3050 FT /organism="Cucumber mosaic virus" FT /segment="RNA 2" FT /isolate="TC" FT /mol_type="genomic RNA" FT /country="United Kingdom" FT /db_xref="taxon:12305" FT CDS 94..2616 FT /codon_start=1 FT /product="2a" FT /db_xref="GOA:A6YQP2" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:A6YQP2" FT /protein_id="ABR37305.1" FT /translation="MTSPPPTFSFANLLNGSYGVDTPEEVERVRREQREDAEAALRNYK FT PLPTVDVSESVPRDEPIVSQTVTTAPVTSVVDAFVSFGAEDYLEMSPSELLSAFELMVK FT PLRIGEVLCPNFDRSLFISSVAMARTLLLAPLTSTRTLKRFEDLVAAIYLKTDFFLEDD FT GPQTDVSQSDVPGYIFEPGQHSSGFEPPPICAKCDLILYQCPCFDFNALRESCAEKTFS FT HDYVIEGLDGVIDNATLLSNLGPFLLPVHCSYSKTEDPDFVVDPSLARPTDRVDAHVVQ FT AVCDTTLPTHVNYDDSFHQVFVDSADYSIDMDHVRLRQSDLVAKIPDGGHMLPVLNTGS FT GHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFRLSYMNVDALAKSNFVN FT VVGNFHAYMQKWQSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVTDTLNVDRPVPATI FT TFHKKTITSQFSPLFVSLFERFQRCLRERIVLPVGKISSLEMTGFSVLNKHCLEIDLSK FT FDKSQGEFHLMIQEHILNDLGCPAPVTKWWCDFHRFSYIKDKRAGVGMPISFQRRTGDA FT FTYFGNTIVTMAEFAWCYDTDQFDRLLFSGDDSLAFSKLPPVGDPSKFTTLFNMEAKVM FT EPAVPYICSKFLLSDEFGNTFSVPDPLREIQRLGTKKIPYSDNNDFLFAHFMSFVDRLK FT FMDRMSQSCIDQLSIFFELKYKKSGNEAAQVLGAFKKYTANFNAYKELYYSDRQQCDLV FT NTFCISEFQVIRRTTVKKKKNGCVDSSGVDRRPPPSPFAGGETSKTKVSRHKPASEGLQ FT KSQRESAIYSEIFPDVTIPRSRSRGLVS" FT CDS 2414..2716 FT /codon_start=1 FT /product="2b" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:A6YQP3" FT /protein_id="ABR37306.1" FT /translation="MDVLTVVVSTADLHLAHLQEVKRRRRRSHVINRRARGYKSPSERA FT RSIARFFQMLPFHGVDPVDWFPDVVRSPSVTSLVSYESFDDTDWFAGNEWAEGSF" XX SQ Sequence 3050 BP; 727 A; 697 C; 687 G; 939 T; 0 other; gttttattct caagagcgta tggttcaacc cctgcctccc ctgtgaaatt accctagttg 60 tgttgatcta cttctagtct cttttctgtt actatgacaa gtcctccacc cactttctca 120 ttcgccaatc tgttgaatgg ctcctatggt gttgacactc ccgaggaagt ggaacgcgtt 180 agacgtgaac aacgcgaaga tgctgaggcg gctttacgta attataagcc tttacccact 240 gtggatgtca gtgagagtgt ccctagagac gaacctattg tctcgcaaac cgtcactaca 300 gctcctgtta catcagtcgt tgacgcgttt gtttcttttg gtgctgagga ctaccttgaa 360 atgtccccat ctgagctgct ttccgctttt gagttgatgg tcaaaccctt gcgtatcggt 420 gaagtgttgt gcccgaattt tgatcgttcg ctattcatct ccagcgtcgc tatggctagg 480 acgttgttgt tggcaccact cacatccacc cgaacgttga agcgttttga agaccttgtg 540 gccgcgatct atctaaaaac tgattttttt ttagaagacg atgggcccca gactgatgtc 600 tcccaaagcg atgtgcccgg ttatatcttc gaaccagggc aacactcatc cggttttgaa 660 ccccccccta tttgcgctaa atgtgacttg attttgtatc aatgtccgtg tttcgatttt 720 aacgcacttc gtgagtcttg cgcagagaaa acattctctc acgactatgt tatcgagggt 780 ctcgatggtg tcattgataa cgctacgctg ttatcaaatt tgggaccatt tttgttacct 840 gtccattgtt cttattcaaa gaccgaggac cccgatttcg tcgttgatcc tagtcttgcg 900 cgacctactg atagggttga tgcacatgta gttcaagccg tttgcgatac cactctgccc 960 acccatgtta actacgatga ttcctttcat caagtctttg tggactctgc tgattattcc 1020 attgacatgg atcacgtacg gttacgtcaa tccgatttag tagcaaaaat tccggatggt 1080 gggcatatgt taccggtgtt aaataccggg agtggtcaca agagagtagg tactacgaag 1140 gaggtcttaa cagcaataaa gaaaagaaat gctgatgtcc ctgagcttgg tgactctgtt 1200 aatctgtcac gcctgagcaa agcagtagcc gaacggtttc gtctctcgta tatgaatgtt 1260 gacgctttgg ctaaaagtaa ctttgttaat gttgtcggta attttcacgc ttacatgcaa 1320 aaatggcaat cttctggact ttcttatgat gatcttcctg atcttcacgc agagaattta 1380 cagttttatg atcacatgat taagtccgat gttaagccag ttgtcaccga cacgttgaac 1440 gtcgacagac ctgtcccagc tactattaca tttcacaaaa agaccataac atcccagttc 1500 tcgccgttgt ttgtatctct gtttgagaga ttccagagat gccttcggga acgtattgtt 1560 ctgcccgttg gtaagatttc ctcccttgag atgactggtt tttcagtctt gaacaaacat 1620 tgtcttgaaa ttgatttatc taaattcgac aaatctcaag gtgagttcca ccttatgatt 1680 caagagcaca ttctcaacga tcttggttgc ccagcacccg tcaccaaatg gtggtgtgac 1740 tttcataggt tttcctatat taaagacaaa cgtgctgggg ttggaatgcc catcagcttt 1800 caacgccgta ctggtgacgc tttcacctat tttggcaata ctattgtcac gatggctgag 1860 tttgcttggt gttatgacac tgatcaattt gaccgattgc tcttttctgg tgatgattct 1920 ctggcttttt ctaagctccc acctgttgga gatcccagta agtttacaac tttattcaac 1980 atggaagcta aggtgatgga acctgcagta ccttacatct gttcgaagtt tctactctct 2040 gatgagtttg gtaatacgtt ttcagtcccc gacccactac gtgaaatcca gcggttaggt 2100 accaagaaga taccgtattc ggacaacaac gatttcttgt tcgctcattt tatgagtttt 2160 gttgacaggc tgaagtttat ggacaggatg tcgcagtcct gtattgatca attgtccatt 2220 ttcttcgagt tgaaatacaa gaagtccggg aacgaagccg cccaagtttt gggcgcgttt 2280 aagaagtaca ccgctaattt taacgcctat aaggagcttt actactctga ccgtcaacaa 2340 tgtgacctgg tcaatacgtt ttgtatatct gagttccagg tgattcgtcg cactaccgtt 2400 aagaagaaga agaatggatg tgttgacagt agtggtgtcg accgccgacc tccacctagc 2460 ccatttgcag gaggtgaaac gtcgaagacg aaggtctcac gtcataaacc ggcgagcgag 2520 gggttacaaa agtcccagcg agagagcgcg atctatagcg agatttttcc agatgttacc 2580 attccacgga gtagatcccg tggattggtt tcctgatgtc gttcgctctc cgtccgttac 2640 cagccttgtt tcttatgaat cttttgatga cactgattgg tttgctggta acgaatgggc 2700 cgaagggtcg ttttgatttc cgacccttcg tcgtccgaag acgttaaact acactctctt 2760 tattgcgagt gctgagttgg tagttttgct ttaaactatc tgaagtcact aaatccagta 2820 ttggttgtga acgggttgtc catccagctt acggctaaaa tggtcagtca tgccccaaag 2880 gcatgccgac accttacaag gttgtcgagg tacccttgaa atcatctcct agatttcttc 2940 ggaagagctt cgtgagaagc tcgtgcacgg taatacactg atgttaccaa gagtgcgggt 3000 atcgcctgtg gttttccaca ggttccctat aaggagacca ggatccggga 3050 //