ID   EF635935; SV 1; linear; mRNA; STD; VRL; 613 BP.
XX
AC   EF635935;
XX
DT   01-JAN-2009 (Rel. 98, Created)
DT   01-JAN-2009 (Rel. 98, Last updated, Version 1)
XX
DE   Sugarcane yellow leaf virus isolate CBB38192 putative aphid transmission
DE   factor mRNA, partial cds; and capsid protein and movement protein mRNAs,
DE   complete cds.
XX
KW   .
XX
OS   Sugarcane yellow leaf virus
OC   Viruses; Riboviria; Luteoviridae; Polerovirus.
XX
RN   [1]
RP   1-613
RA   Viswanathan R., Balamuralikrishnan M., Karuppaiah R.;
RT   "Detection and molecular characterization of sugarcane yellow leaf virus,
RT   causing yellow leaf of sugarcane in tropical India";
RL   Unpublished.
XX
RN   [2]
RP   1-613
RA   Viswanathan R., Balamuralikrishnan M., Karuppaiah R.;
RT   ;
RL   Submitted (30-MAY-2007) to the INSDC.
RL   Plant Pathology, Sugarcane Breeding Institute, Sugarcane (post),
RL   Coimbatore, Tamil Nadu 641 007, India
XX
DR   MD5; a3c139f39f886c1cf38d317976cad264.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..613
FT                   /organism="Sugarcane yellow leaf virus"
FT                   /host="Saccharum sp. hybrid, variety B38192"
FT                   /isolate="CBB38192"
FT                   /mol_type="mRNA"
FT                   /country="India"
FT                   /clone="1"
FT                   /db_xref="taxon:94290"
FT   CDS             1..>613
FT                   /codon_start=1
FT                   /transl_except=(pos:589..591,aa:OTHER)
FT                   /product="putative aphid transmission factor"
FT                   /note="ORF5; produced by translational readthrough of TAG
FT                   stop codon of ORF3"
FT                   /db_xref="GOA:B8LJ58"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:B8LJ58"
FT                   /protein_id="ACB87411.1"
FT                   /translation="MNTGANRPRRNVRRRANRRRQTRPVVVVRPAAGPRRVRRRRARVG
FT                   GNAVRGPGGRSNRDVLTFTIDDLKANSTGILKFGPNLSQYAAFNNGLLKAYHEYKITSL
FT                   TIQYNSCSSDATPGAIALEVDTSCSQTTTGSKITSFPVKRNAKKTFPAPFIRGKDFMTT
FT                   SADQFWLLYKGNGDGSLAGQFVCRFECLFQNPKXVSDAPPT"
FT   CDS             1..591
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /note="ORF3"
FT                   /db_xref="GOA:B7U4K8"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:B7U4K8"
FT                   /protein_id="ACB87409.1"
FT                   /translation="MNTGANRPRRNVRRRANRRRQTRPVVVVRPAAGPRRVRRRRARVG
FT                   GNAVRGPGGRSNRDVLTFTIDDLKANSTGILKFGPNLSQYAAFNNGLLKAYHEYKITSL
FT                   TIQYNSCSSDATPGAIALEVDTSCSQTTTGSKITSFPVKRNAKKTFPAPFIRGKDFMTT
FT                   SADQFWLLYKGNGDGSLAGQFVCRFECLFQNPK"
FT   CDS             32..484
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /note="ORF4"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:B8LJ60"
FT                   /protein_id="ACB87410.1"
FT                   /translation="MSEDALTVVDRLGQWSWSGLPQDLDEYDDVEHVLEETLCEDREEE
FT                   ATGMFSLSRLTISRPTQPGSSNSDRTYLSTQRSTMAYSKPTMSIKSQVSLSSITHAPPT
FT                   QLQVQSHLKWIHPAPKQQQAPRLQASPSRGTPRKPSRPPSSGGKTS"
XX
SQ   Sequence 613 BP; 177 A; 170 C; 145 G; 121 T; 0 other;
     atgaatacgg gcgctaaccg tccacgaagg aatgtcagaa gacgcgctaa ccgtcgtcga        60
     cagactcggc cagtggtcgt ggtccggcct gccgcaggac ctagacgagt acgacgacgt       120
     agagcacgtg ttggaggaaa cgctgtgcga ggaccgggag gaagaagcaa cagggatgtt       180
     ctcactttca cgattgacga tctcaaggcc aactcaaccg ggatcctcaa attcggaccg       240
     aacttatctc agtacgcagc gttcaacaat ggcttactca aagcctacca tgagtataaa       300
     atcacaagtc tcactatcca gtataactca tgctcctccg acgcaactcc aggtgcaatc       360
     gcacttgaag tggatacatc ctgctcccaa acaacaacag gctccaagat tacaagcttc       420
     cccgtcaaga ggaacgccaa gaaaaccttc ccggccccct tcatcagggg gaaagacttc       480
     atgactacat cagctgatca gttttggctt ttgtacaaag ggaatggaga cggaagccta       540
     gcaggacaat tcgtctgccg atttgaatgt ttattccaga atcccaaata ggtaagcgac       600
     gctcccccaa cac                                                          613
//