ID EF611826; SV 1; linear; genomic RNA; STD; VRL; 6422 BP. XX AC EF611826; XX DT 18-JUL-2007 (Rel. 92, Created) DT 04-APR-2012 (Rel. 112, Last updated, Version 2) XX DE Cucumber green mottle mosaic virus isolate Liaoning, complete genome. XX KW . XX OS Cucumber green mottle mosaic virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6422 RA Chen H., Bai J., Zhu S.; RT ; RL Submitted (14-MAY-2007) to the INSDC. RL Biosafety Lab, Institute of Animal and Plant, No. 241, Huixinli, Beijing RL 100029, China XX DR MD5; d3247fedddd9a857adf17c757045c86e. DR RFAM; RF01072; TMV_UPD-PK3. XX FH Key Location/Qualifiers FH FT source 1..6422 FT /organism="Cucumber green mottle mosaic virus" FT /host="Citrullus lanatus" FT /isolate="Liaoning" FT /mol_type="genomic RNA" FT /db_xref="taxon:12235" FT CDS 60..5006 FT /codon_start=1 FT /transl_except=(pos:3492..3494,aa:OTHER) FT /product="186K protein readthrough product" FT /note="replicase protein" FT /db_xref="GOA:A7KY79" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:A7KY79" FT /protein_id="ABS18387.1" FT /translation="MANINEQINNQRDAAASGRNNLVSQLASKRVYDEAVRSLDHQDRR FT PKMNFSRVVSTEHTRLVTDAYPEFSISFTATKNSVHSLAGGLRLLELEYMMMQVPYGSP FT CYDIGGNYTQHLFKGRSYVHCCNPCLDLKDVARNVMYNDMITQHVQRHKGSGGCRPLPT FT FQIDAFRRYDSSPCAVTCSDVFQECSYDFGSGRDNHAVSLHSIYDIPYSSIGPALHRKN FT VRVCYAAFHFSEALLLGSPVGNLNSIGAQFRVDGDDVHFLFSEESTLHYTHSLENIKLI FT VMRTYFPADDRFVYIKEFMVKRVDTFFFRLVRADTHMLHKSVGHYSKSKSEYFALNTPP FT IFQDKATFSVWFPEAKRKVLIPKFELSRFLSGNVKISRMLVDADFVHTIINHISTYDNK FT ALVWKNVQSFVESIRSRVIVNGVSVKSEWNVPVDQLTDISFSIFLLVKVRKVQIELMSD FT KVVIEARGLLRRFADSLKSAVEGLGDCVYDALVQTGWFDTSSDELKVLLPEPFMTFSDY FT LEGMYEADAKIERESVSELLASGDDLFEKIDEIRNNYSGVKFDVEKFQEFCKELNVNPM FT LIGHVIEAIFSQKAGVTVTGLGTLSPEMGASVALSSTSVDTCEDMDVTEDMEDIVLMAD FT KSHSYMSPEMARWADVKYGNNKGALVEYKVGTSMTLPATWAEKGKAVLPLSGICVRKPQ FT FSKPLDEEDDLRLSNMNFFKVSDLKLKKTITPVVYTGTIRERQMKNYIDYLSASLSSTL FT GNLERIVRSDWSGTEESMQTFGLYDCEKCKWLLLPAEKKHAWAVVLASDDTTRIIFLSY FT DESGSPIIDKKNWKRFAVCSETKVYSVIRSLEVLNKEAIVDPGVHITLVDGVPGCGKTA FT EIIARVNWKTDLVLTPGREAAAMIRRRACALHKSPVATSDNVRTFDSFVMNRKIFKFDA FT VYVDEGLMVHTGLLNFALKISGCKKAFVFGDAKQIPFINRVMNFDYPKELRTLIVDNVE FT RRYVTHRCPRDVTSFLNTIYKAAVATTSPVVHSVKAIKVSGAGILRPELTKIKGKIITF FT TQSDKQSLIKSGYNDVNTVHEIQGETFEETAVVRATPTPIGLIARDSPHVLVALTRHTK FT AMVYYTVVFDAVTSIIADVEKVGQSILTMFATTVPTKXQLMQNSLYVHRNIFLPVSKTG FT FYTDMQEFYDRCLPGNSFVLNDFDAVTMRLRDNEFNLQPRRLTLSNLDPVPALIKNEAQ FT NFLIPVLRTACERPRIPGLLENLVAMIKRNMNTPDLAGTVDITNMSISIVDNFFSSFVR FT DEVLLDHLDCVRASSIQSFSDWFPCQPTSAVGQLANFNFIDLPAFDTYMHMIKRQPKSR FT LDTSIQSEYPALQTIVYHPKVVNAVFGPVFKYLTTKFLSMVDSSKFFFYTRKKPEDLQE FT FFSDLSSHSDYEILELDVSKYDKSQSDFHFSIEMAIWEKLGLDDILAWMWSVGHKRTIL FT QDFQAGIKTLIYYQRKSGDVTTFIGNTFIIAACVASMLPLDKCFKASFCGDDSLIYLPK FT GLEYPDIQATANLVWNFEAKLFRKKYGYFCGKYIIHHANGCIVYPDPLKLISKLGNKSL FT VGYEHVEEFRISLLDVAHSLFNGAYFHLLDDAIHELFPNAGGCSFVINCLCKYLSDKRL FT FRSLYIDVSK" FT CDS 60..3494 FT /codon_start=1 FT /product="129K protein" FT /note="RNA replicase" FT /db_xref="GOA:A7KY80" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:A7KY80" FT /protein_id="ABS18388.1" FT /translation="MANINEQINNQRDAAASGRNNLVSQLASKRVYDEAVRSLDHQDRR FT PKMNFSRVVSTEHTRLVTDAYPEFSISFTATKNSVHSLAGGLRLLELEYMMMQVPYGSP FT CYDIGGNYTQHLFKGRSYVHCCNPCLDLKDVARNVMYNDMITQHVQRHKGSGGCRPLPT FT FQIDAFRRYDSSPCAVTCSDVFQECSYDFGSGRDNHAVSLHSIYDIPYSSIGPALHRKN FT VRVCYAAFHFSEALLLGSPVGNLNSIGAQFRVDGDDVHFLFSEESTLHYTHSLENIKLI FT VMRTYFPADDRFVYIKEFMVKRVDTFFFRLVRADTHMLHKSVGHYSKSKSEYFALNTPP FT IFQDKATFSVWFPEAKRKVLIPKFELSRFLSGNVKISRMLVDADFVHTIINHISTYDNK FT ALVWKNVQSFVESIRSRVIVNGVSVKSEWNVPVDQLTDISFSIFLLVKVRKVQIELMSD FT KVVIEARGLLRRFADSLKSAVEGLGDCVYDALVQTGWFDTSSDELKVLLPEPFMTFSDY FT LEGMYEADAKIERESVSELLASGDDLFEKIDEIRNNYSGVKFDVEKFQEFCKELNVNPM FT LIGHVIEAIFSQKAGVTVTGLGTLSPEMGASVALSSTSVDTCEDMDVTEDMEDIVLMAD FT KSHSYMSPEMARWADVKYGNNKGALVEYKVGTSMTLPATWAEKGKAVLPLSGICVRKPQ FT FSKPLDEEDDLRLSNMNFFKVSDLKLKKTITPVVYTGTIRERQMKNYIDYLSASLSSTL FT GNLERIVRSDWSGTEESMQTFGLYDCEKCKWLLLPAEKKHAWAVVLASDDTTRIIFLSY FT DESGSPIIDKKNWKRFAVCSETKVYSVIRSLEVLNKEAIVDPGVHITLVDGVPGCGKTA FT EIIARVNWKTDLVLTPGREAAAMIRRRACALHKSPVATSDNVRTFDSFVMNRKIFKFDA FT VYVDEGLMVHTGLLNFALKISGCKKAFVFGDAKQIPFINRVMNFDYPKELRTLIVDNVE FT RRYVTHRCPRDVTSFLNTIYKAAVATTSPVVHSVKAIKVSGAGILRPELTKIKGKIITF FT TQSDKQSLIKSGYNDVNTVHEIQGETFEETAVVRATPTPIGLIARDSPHVLVALTRHTK FT AMVYYTVVFDAVTSIIADVEKVGQSILTMFATTVPTK" FT CDS 4993..5787 FT /codon_start=1 FT /product="29K protein" FT /note="movement protein" FT /db_xref="GOA:A7KY81" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:A7KY81" FT /protein_id="ABS18389.1" FT /translation="MSLSKVSVENSLKPEKFVKISWVDKLLPNYFSILKYLSITDFSVV FT KAQSYESLVPVKLSRGVDLTKHLYVTLLGVVVSGVWNVPESCRGGATVALVDTRMHSVA FT EGTICKFSAPATVREFSVRFIPNYSVVAAGALRDPWSLFVRLSNVGIKDGFHPLTLEVA FT CLVATTNSIIKKGLRASVVESVVSSDQSIVLDSLSEKVEPFFDKVPISAAVMARDPSYR FT SRSQSVGGRGKRHSKPPNRRLDSVSEESSSVSFEDGLQSDHT" FT CDS 5762..6247 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:Q77G05" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:Q77G05" FT /protein_id="ABS18390.1" FT /translation="MAYNPITPSKLIAFSASYVPVRTLLNFLVASQGTAFQTQAGRDSF FT RESLSALPSSVVDINSRFPDAGFYAFLNGPVLRPIFVSLLSSTDTRNRVIEVVDPSNPT FT TAESLNAVKRTDDASTAARAEIDNLIESISKGFDVYDRASFEAAFSVVWSEATTSKA" XX SQ Sequence 6422 BP; 1645 A; 1240 C; 1533 G; 2004 T; 0 other; gttttaattt ttataattaa acaaacaaca acaacaacaa caaacatttt aaaacaacaa 60 tggcaaacat taatgaacaa atcaacaacc aacgtgacgc cgcggctagc gggagaaaca 120 atctcgttag ccaattggcg tcaaaaaggg tgtatgacga ggctgttcgc tcgttggatc 180 atcaagacag acgcccgaaa atgaactttt ctcgtgtggt cagcacagag cacaccaggc 240 ttgtaactga tgcgtatccg gagttttcga ttagctttac cgccaccaag aactctgtac 300 actcccttgc gggtggtctg aggcttcttg aattggaata tatgatgatg caagtgccct 360 acggctcacc ttgttatgac atcggcggta actatacgca acacttgttc aaaggtagat 420 catatgtgca ttgctgcaat ccgtgcctag atcttaaaga tgttgcgagg aatgtgatgt 480 acaacgatat gatcacgcaa catgtacaga ggcacaaggg atctggcggg tgcagacctc 540 ttccaacttt ccagatagat gcattcagga ggtacgatag ttctccctgt gcggtcacct 600 gttcagacgt tttccaagag tgttcctatg attttgggag tggtagggat aatcatgcag 660 tctcgttgca ttcaatctac gatatccctt attcttcgat cggacctgct cttcatagga 720 agaatgtgcg agtttgttat gcagcctttc atttctcgga ggcattgctt ttaggttcgc 780 ctgtaggtaa tttaaatagt attggggctc agtttagggt cgatggtgat gatgtgcatt 840 ttctttttag tgaagagtct actttgcatt atactcatag tttagaaaat atcaagttaa 900 tcgtgatgcg tacttacttt cctgctgatg ataggtttgt atatattaag gagttcatgg 960 ttaagcgtgt ggatactttt ttctttaggt tggtcagagc agatacacac atgcttcata 1020 aatctgtggg gcactattcg aaatcgaagt ctgagtactt cgcgctgaat acccctccga 1080 tcttccaaga taaagccacg ttttctgtgt ggtttcctga agcgaagcgc aaggtgttga 1140 tacccaagtt tgaactttcg agattccttt ctgggaatgt gaaaatctct aggatgcttg 1200 tcgatgctga tttcgtccat accattatta atcacattag cacgtatgat aataaggcct 1260 tagtgtggaa gaatgttcag tcctttgtgg aatccatacg ttcaagagta attgtaaacg 1320 gagtttccgt gaaatctgag tggaacgtac cggttgatca gctcactgat atttcgttct 1380 cgatattcct tctcgtgaag gttaggaagg tacagatcga gttaatgtct gataaagttg 1440 taatcgaggc gaggggtttg cttcggaggt tcgcagacag tcttaaatct gccgtagaag 1500 gactaggtga ttgcgtctat gatgctctag ttcaaaccgg ctggtttgac acctctagcg 1560 acgaactgaa agtattgcta cctgaaccgt ttatgacctt ttcggattat cttgaaggga 1620 tgtacgaggc agatgcaaag atcgagagag agagtgtctc tgagttgctc gcttccggtg 1680 atgatttgtt cgagaaaatc gatgagataa gaaacaatta cagtggagtc aaatttgatg 1740 tagagaaatt ccaagaattt tgcaaggaac tgaatgttaa tcctatgcta attggccatg 1800 ttatcgaagc tattttttcg cagaaggctg gggtaacagt aacgggtctg ggcacgctct 1860 ctcccgagat gggcgcttct gttgcgttat ccagtacctc tgtagataca tgtgaagata 1920 tggatgtaac tgaagatatg gaggatatag tgttgatggc ggacaagagt cattcttaca 1980 tgtcccctga aatggcgaga tgggctgatg ttaaatatgg taacaataaa ggggctctgg 2040 tcgagtacaa agtcggaacc tcgatgactt tacctgccac ctgggcagag aaaggtaagg 2100 ctgtcttacc gttgtcgggg atctgtgtga ggaaacccca attttcgaag ccgcttgatg 2160 aggaagatga cttgaggtta tcgaacatga atttctttaa ggtgagcgat ctaaagttga 2220 agaagactat cactccagtc gtttacactg ggaccattcg agagaggcaa atgaagaatt 2280 atattgatta cttatcggcc tctcttagtt ccacgctggg taatctggag agaatcgtgc 2340 ggagtgattg gagtggtact gaggagagta tgcaaacgtt cgggttgtat gactgcgaaa 2400 agtgcaagtg gttattgttg ccagccgaga agaagcacgc atgggccgtg gttctggcaa 2460 gtgatgatac cactcgcata atcttccttt catatgacga atccggttct cctataattg 2520 ataagaaaaa ctggaagcga tttgctgtct gttccgagac caaagtctat agtgtaattc 2580 gtagtttaga ggttctaaat aaggaagcaa tagtcgaccc cggggttcac ataacattag 2640 ttgatggagt gccgggttgt ggaaagaccg ccgagattat agcgagggtc aattggaaaa 2700 ctgatctagt attgactccc gggagggagg cggctgctat gattaggcgg agagcctgcg 2760 ccctgcacaa gtcacctgtg gcaaccagtg acaacgtcag aactttcgat tcttttgtga 2820 tgaataggaa aatcttcaag tttgacgctg tctatgttga cgagggtctg atggtccata 2880 cgggattact taattttgcg ttaaagatct caggttgtaa aaaagccttc gtctttggtg 2940 atgctaagca aatcccgttt ataaacagag tcatgaattt tgattatcct aaggagttaa 3000 gaactttaat agtcgataac gtagagcgta ggtatgtcac ccataggtgt cctagagatg 3060 tcactagttt tcttaatact atctataaag ccgctgtcgc tactactagt ccggttgtac 3120 attctgtgaa ggcaattaaa gtgtcagggg ccggtattct gaggcctgag ttgacaaaga 3180 tcaaaggaaa gataataacg tttactcaat ctgataagca gtccttgatc aagagtgggt 3240 acaatgatgt gaatactgtg catgaaattc agggagaaac ctttgaggag acggcagttg 3300 tgcgtgccac cccgactcca ataggtttga ttgcccgtga ttcaccacat gtactagtgg 3360 ccttaactag gcatactaag gcaatggtgt attatactgt tgtattcgat gcagttacaa 3420 gtataatagc ggatgtggaa aaggtcggtc agtcgatctt gaccatgttt gctaccactg 3480 tgcctaccaa atagcaatta atgcagaatt cgctgtatgt ccatcgtaat attttcctcc 3540 ctgttagtaa aacggggttt tatacagaca tgcaggagtt ctacgataga tgccttcctg 3600 ggaattcctt cgtactgaat gatttcgatg ccgtaaccat gcggttgagg gacaacgaat 3660 ttaacttaca acctcgtagg ctaaccttga gtaatttgga tccggtaccc gctttgatta 3720 agaatgaagc gcagaatttt ctgatccccg ttttgcgtac ggcctgtgaa aggccgcgca 3780 ttccgggtct tcttgagaat cttgtagcta tgataaagag gaatatgaat actcctgatt 3840 tagctgggac cgtagatata actaacatgt cgatttctat agtagataac ttcttttctt 3900 cttttgttag ggacgaggtt ttgcttgatc acttagattg tgttagggct agttccattc 3960 aaagtttttc cgattggttt ccgtgtcagc caacctcagc ggttggccag ttagctaatt 4020 tcaatttcat agatttgcct gcctttgata cttatatgca tatgattaag aggcaaccca 4080 agagtcggtt agatacttcg attcagtctg aatatccggc cttgcaaact attgtttatc 4140 accctaaagt ggtaaatgca gtttttggtc cggttttcaa gtatttgacc accaagtttc 4200 ttagtatggt agatagttct aagtttttct tttacactag gaaaaaacca gaagatctgc 4260 aggaattttt ctcagatctc tcttcccatt ctgattatga gattcttgag cttgatgttt 4320 ctaaatatga caagtcgcaa tccgatttcc atttctctat tgagatggca atttgggaaa 4380 aattggggct ggacgatatt ttggcttgga tgtggtctgt gggtcacaaa agaactatac 4440 tgcaagattt ccaagccggg ataaagacgc tcatttacta tcaacggaag tctggtgatg 4500 taactacttt tataggtaat acctttatta tcgcagcgtg tgtagctagt atgttaccgt 4560 tagataagtg ttttaaagct agtttttgtg gtgatgattc gctgatctac cttcctaagg 4620 gcttggagta tcctgatata caagctactg ccaaccttgt ttggaatttt gaggcgaaac 4680 ttttccgaaa gaagtatggt tacttctgcg ggaagtatat aattcaccat gccaacggct 4740 gtattgttta ccctgaccct ttaaaattaa ttagtaaatt aggtaataag agtcttgtag 4800 ggtatgagca tgttgaggag tttcgtatat ctctcctcga cgttgctcat agtttgttta 4860 atggtgctta tttccattta ctcgacgatg caatccacga attatttcct aatgctgggg 4920 gttgcagttt tgtaattaat tgtttgtgta agtatttgag tgataagcgc cttttccgta 4980 gtctttacat agatgtctct aagtaaggtg tcagtcgaga actcgttgaa acctgagaag 5040 tttgtcaaaa tctcttgggt cgataagttg ctccctaact atttttccat tcttaagtat 5100 ttatctataa ctgactttag tgtagttaaa gctcagagct atgaatccct cgtgcctgtc 5160 aagttgtcgc gtggtgttga tcttacaaaa cacctttatg tcacattgtt gggcgttgtg 5220 gtttctggtg tatggaacgt accggaatcc tgtaggggtg gtgctactgt tgctctggtt 5280 gacacaagga tgcattctgt tgcagaggga actatatgca aattttcagc tcccgccacc 5340 gtccgcgaat tctctgttag gttcatacct aattattctg tcgtggctgc gggtgccctt 5400 cgcgatcctt ggtctttatt tgtgagactc tctaatgtgg gtattaaaga tggtttccat 5460 cctttgactt tagaggtcgc ttgtttagtc gctacaacta actctattat caaaaagggt 5520 cttagagctt ctgtagtcga gtctgtcgtc tcttccgatc agtctattgt cctagattct 5580 ttatccgaga aagttgaacc tttctttgac aaagttccta tttcagcggc tgtaatggca 5640 agagatccca gttataggtc taggtcgcag tctgtcggtg gtcgtggtaa gcggcattct 5700 aaacctccaa atcggaggtt ggactctgtt tctgaagagt ccagttctgt ttcttttgaa 5760 gatggcttac aatccgatca cacctagcaa acttattgcg tttagtgctt cttatgttcc 5820 cgtcaggact ttacttaatt ttctagttgc ttcacaaggt accgctttcc agactcaagc 5880 gggaagagat tctttccgcg agtccctgtc tgcgttaccc tcgtctgtcg tagatattaa 5940 ttctagattc ccagatgcgg gtttttacgc tttcctcaac ggtcctgtgt tgaggcctat 6000 cttcgtttcg cttctcagct ccacggatac gcgtaatagg gtcattgagg ttgtagatcc 6060 tagcaatcct acgactgctg agtcgcttaa cgctgtaaag cgtactgatg acgcgtctac 6120 agccgctagg gctgagatag ataatttaat agagtctatt tctaagggtt ttgatgttta 6180 cgatagggct tcatttgaag ccgcgttttc ggtagtctgg tcagaggcta ccacctcgaa 6240 agcttagttt cgagggtctt ctgatggtgg tgcacaccaa agtgcatagt gctttcccgt 6300 tcacttaaat cgaacggttt gctcattggt ttgcggaaac ctctcacgtg tgacgttgaa 6360 gtttctatgg gcagtaattc tgcaaggggt tcgaatcccc cctttccccg ggtaggggcc 6420 ca 6422 //