ID EF589670; SV 1; linear; genomic RNA; STD; VRL; 4293 BP. XX AC EF589670; XX DT 04-JUN-2007 (Rel. 92, Created) DT 04-JUN-2007 (Rel. 92, Last updated, Version 1) XX DE Maize white line mosaic virus, complete genome. XX KW . XX OS Maize white line mosaic virus OC Viruses; Riboviria; Tombusviridae; Procedovirinae; Aureusvirus. XX RN [1] RP 1-4293 RA Russo M.; RT "Sequence Analysis of Maize White Line Mosaic Virus (MWLMV)"; RL Unpublished. XX RN [2] RP 1-4293 RA Russo M.; RT ; RL Submitted (02-MAY-2007) to the INSDC. RL Istituto di Virologia Vegetale, Sez. Bari, Consiglio Nazionale delle RL Ricerche, Via Amendola 165/A, Bari, BA 70126, Italy XX DR MD5; 3c04439e6e23d246762a8a858e24f865. XX FH Key Location/Qualifiers FH FT source 1..4293 FT /organism="Maize white line mosaic virus" FT /host="Maize" FT /mol_type="genomic RNA" FT /country="USA" FT /db_xref="taxon:445227" FT CDS 41..2434 FT /codon_start=1 FT /transl_except=(pos:863..865,aa:OTHER) FT /product="RNA directed-RNA polymerase" FT /note="p92; contains readthrough stop codon; ORF2" FT /db_xref="GOA:A5YVA4" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR013707" FT /db_xref="UniProtKB/TrEMBL:A5YVA4" FT /protein_id="ABQ65750.1" FT /translation="MALARGVLSQRVVTAAVDVTFGSVDYSDPRIVAALCDGGLKGRAT FT VRRQIVTALKWLVMVLTWPVRMPAMAIVWCLTWVALMVTRTTRKICCVVSRLYSESSAL FT VRAYWRVYNKRTRAVACTGLVGSLALYGPAAVLVWVCLLVVFVFCTLPADARYYIKLAK FT KIQDAWDAVEEDDSITPAADGGPLEVRSGRNRFACRLAARAISRVGLLKPTKANALVYQ FT KVILDEMKVLNVRFGDRVRVLPLAVVACLERPDAVDRVEGVIDALTCLPGSLXGGLVRR FT EGCDTDTDRTKFDLSAVQGVTRMEGITVRTGTSAKGGRTWYSFNSPATTYEYIVHNSSL FT KNVVRGLVERVFCVVDKKTGELVRPPKPVKGLFTKKLGDVGQVVSQLVGYCPHWTRQEF FT LASYNGPRKASYERAALTLDTLPLREEDAHLSTFVKAEKINVTLKPDPAPRVIQPRGQR FT YNIEVGRFLKPLEPRLMKAIDKLWGSTTAIKGYTVERVGAIMNEKANRFREPVFVGLDA FT SRFDQHCSAEALRWEHSVYNDIFRSEYLATLLQWQVNNRGTAYTKEGTVSYKVEGCRMS FT GDMNTSMGNYLIMSCLIYAFCREVRLKAELANCGDDCVLFLEKEDLHKLGTLPQWFVRM FT GYTMKVEEPVYEVEHIEFCQMRPIRTSRGWVMVRRPDTVLTKDCCVVRGGMTEERLKGW FT LGSMRDGGLSLAGDVPILGAFYRSFPSYASQEASEYSAPHKFRAGKQYGAVTDESRYSF FT WLAFGLTPDDQLAVESELSKMAFHTRPEQKGPYQPSLLDYCTRT" FT CDS 41..865 FT /codon_start=1 FT /product="p30" FT /note="pre-readthrough region of RNA directed-RNA FT polymerase; ORF1" FT /db_xref="GOA:A5YVA5" FT /db_xref="InterPro:IPR013707" FT /db_xref="UniProtKB/TrEMBL:A5YVA5" FT /protein_id="ABQ65749.1" FT /translation="MALARGVLSQRVVTAAVDVTFGSVDYSDPRIVAALCDGGLKGRAT FT VRRQIVTALKWLVMVLTWPVRMPAMAIVWCLTWVALMVTRTTRKICCVVSRLYSESSAL FT VRAYWRVYNKRTRAVACTGLVGSLALYGPAAVLVWVCLLVVFVFCTLPADARYYIKLAK FT KIQDAWDAVEEDDSITPAADGGPLEVRSGRNRFACRLAARAISRVGLLKPTKANALVYQ FT KVILDEMKVLNVRFGDRVRVLPLAVVACLERPDAVDRVEGVIDALTCLPGSL" FT CDS 2489..3487 FT /codon_start=1 FT /product="virus coat protein" FT /note="CP; ORF3" FT /db_xref="GOA:A5YVA6" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:A5YVA6" FT /protein_id="ABQ65751.1" FT /translation="MARKKRSNQVQTGQGVRRAAGAVITAPVARTRQVRARPPKVEALA FT GGGFRVTHRELITTIANSATYQANGGIAGLKYRMNPTYGSTLTWCPALASNFDQYVFRK FT LTLEYVPTCGTTETGRVGIWFDRDSEDDPPADRVELASMGVLVETAPWSGVTLQVPTDN FT TKRFCLGAGGNTDAKLIDLGQIGFSTYAGAGTNAVGDLFAEYVVDLHCPQPSGALVQTL FT RITSAGVRGPEVGPLYYNMTKAATLIDLTFFTPGTFLISIGCAATSYTSELVLGGATLN FT SRTLTATGAGFSGSFNVTVTKPLDGLRIQGTGFGDCMTFAVRARVANSVTV" FT CDS 3524..4207 FT /codon_start=1 FT /product="movement protein" FT /note="MP; ORF4" FT /db_xref="GOA:A5YVA7" FT /db_xref="InterPro:IPR005332" FT /db_xref="UniProtKB/TrEMBL:A5YVA7" FT /protein_id="ABQ65752.1" FT /translation="MSIISLDGEFDCPPYQPTSSRFHFTHKTRKSAICIGPSTFGKLWR FT VPRAGYYTPTDVTFVVTPHISEKAGVMATVKLIDASDMSPSRVLFETKAFNLGHGTVLE FT GSQLPFCLPIGEYPIHFEVTVSRSQFRGERTMYSTSLEWQMMCSPTPLSRVRSVFAVAH FT QPVLDAVPNFSMKTKKKSSVLSGGKGQATEKRILAGGGTARGVVPPGCVAPAEGIPVIA FT TIEDH" FT CDS 3652..4068 FT /codon_start=1 FT /product="silencing suppressor protein" FT /note="p15; ORF5" FT /db_xref="UniProtKB/TrEMBL:A5YVA8" FT /protein_id="ABQ65753.1" FT /translation="MASPEGWVLHPNRCDLCGYATYLRESWRYGDCQTHRRIRHEPIPS FT AVRDQGVQPWPWDGTGGVSIAVLPANRGISYTLRGHGVTITVSGRTDNVLNITRVANDV FT FSHPVIQGSICVRGCAPTSVGCGPEFLNENQKEV" XX SQ Sequence 4293 BP; 970 A; 1072 C; 1259 G; 992 T; 0 other; agaatacctc ctggatctaa ccaatccgtg agagttggcc atggccttgg ctagaggtgt 60 tctctcccag cgcgtcgtga cggcggcagt tgacgttact tttggtagtg ttgactacag 120 tgacccacgc attgtggcag cactgtgtga tgggggtttg aaggggcggg cgaccgtaag 180 gcgtcaaatt gtaactgcgc tcaaatggct agtgatggtg ctcacttggc ccgtaaggat 240 gcccgcgatg gcgatcgtgt ggtgtctgac atgggtagca ctgatggtca ctcgaaccac 300 caggaagatc tgctgtgtcg ttagcaggtt gtactccgag tcctccgcct tagtccgtgc 360 atactggcgt gtgtacaata aaaggactag ggccgtggct tgcactggcc tggtgggttc 420 cctggcactg tacggccctg ctgctgtgtt ggtgtgggtg tgtcttctag tggtgttcgt 480 cttttgtaca ctaccggctg atgcccgata ctacatcaaa ttggccaaga aaatacagga 540 tgcttgggac gcggttgagg aggatgacag catcacccca gccgctgatg gtggaccact 600 ggaggttcgc tccgggcgga accggttcgc gtgccgactg gcagcgaggg caatcagtcg 660 tgtgggcttg ttgaagccca ctaaggcaaa cgctctcgtg taccagaagg ttatcctcga 720 cgagatgaaa gtgctcaacg tccggttcgg tgaccgagta cgagtgctgc cacttgccgt 780 ggtcgcgtgt ctggaacggc ccgatgctgt ggatagggtt gagggggtca ttgacgccct 840 cacctgtctg cctggcagcc tctagggagg ccttgtccgc cgtgaagggt gcgacaccga 900 cactgaccgc acaaaatttg atctatcagc ggttcagggg gtgacacgca tggagggaat 960 cacggtacgg acagggacct cagccaaagg tgggagaact tggtactcgt tcaactcacc 1020 ggcaacgaca tatgagtaca ttgtccacaa ctcatcactt aagaacgtag tcaggggact 1080 tgtcgagcgg gtcttctgtg ttgtggacaa gaaaactggt gaactggtcc ggcccccaaa 1140 acctgttaag gggctattca ccaagaagct cggtgacgtc ggtcaagtag tgagtcaact 1200 cgttggttat tgcccccact ggacacgtca agaattcttg gcgtcttaca atgggccgcg 1260 aaaagccagt tacgagcggg ctgcgctaac gctagacact ctgcccttgc gtgaggagga 1320 tgcgcatctg agcacctttg taaaggcgga gaagatcaac gtcactctga aacctgatcc 1380 tgccccacga gtgattcagc cgcgtggaca gcggtacaac attgaggtgg gaaggtttct 1440 gaaacccctg gaaccacgcc taatgaaggc gatcgataag ctgtgggggt ccaccacagc 1500 tattaagggg tacacggttg agagagtcgg ggctatcatg aatgagaaag ctaacagatt 1560 tcgtgagcct gtgtttgtgg gtttagatgc ctctcggttt gaccaacatt gttctgccga 1620 ggcccttaga tgggaacaca gtgtttacaa cgacatcttt cgatctgagt atctcgcaac 1680 actcttacag tggcaggtca acaatagagg gactgcctac actaaagagg gtactgtgag 1740 ttacaaggta gaagggtgcc gtatgtctgg ggacatgaac acgtcgatgg gaaattattt 1800 aatcatgtcc tgcttgatct atgccttttg ccgggaagtt agactgaaag cggaattggc 1860 taactgtggt gacgattgcg tgctgttttt ggagaaagag gatcttcaca agcttggcac 1920 tttaccgcag tggtttgtac gtatgggata tacgatgaag gtggaggagc cggtgtatga 1980 ggtggagcac attgagttct gccaaatgcg ccccattcgc acctccagag gatgggtcat 2040 ggtcaggcgt ccggacactg ttctaacaaa ggattgttgt gttgtcaggg gaggaatgac 2100 tgaggagcgg ttgaagggat ggcttggtag tatgcgcgat ggcggtctca gccttgctgg 2160 ggacgtaccc atattgggtg ccttctaccg gtccttccca tcatacgctt ctcaggaagc 2220 ttccgagtac agcgccccac acaagttccg ggcgggtaag cagtacggcg ctgtcacaga 2280 cgagagccgg tattcctttt ggctggcgtt tgggctcaca cccgacgacc agcttgctgt 2340 ggagagtgaa ttgtcaaaga tggcgtttca tactcgtccg gagcaaaaag gaccgtacca 2400 gccctcgcta cttgactact gcactagaac ctgaccagtt caccagccac cttgactact 2460 gcactagaac ctgaccagtt caccagccat ggcgaggaag aagcggagca accaggtaca 2520 gacgggacag ggagtgaggc gagcagcagg ggctgtcatt acagctcctg tagctaggac 2580 ccgacaagtg agggcccggc cacctaaggt cgaggcgtta gcgggcggtg gttttcgggt 2640 cacccatagg gagttgatca ctaccattgc caactcggct acataccagg cgaacggggg 2700 tattgctgga ttaaagtaca ggatgaatcc gacgtacggc tccaccttga cgtggtgtcc 2760 ggccttggca tccaacttcg accagtatgt cttccgcaaa ttgaccttgg aatacgtgcc 2820 gacgtgtggg acaacggaga cggggagggt gggcatctgg ttcgataggg actctgaaga 2880 tgacccgcct gctgaccgag tggaattggc tagtatgggg gtacttgtgg agactgctcc 2940 atggagcggt gtcacactac aggtacccac ggacaacacc aagagattct gcctcggcgc 3000 tggtggcaac acggatgcca aactgataga ccttggtcaa atcggtttta gtacgtacgc 3060 gggagctggg acgaacgctg tcggtgatct attcgccgag tatgtcgtgg atctacactg 3120 cccgcaaccg tctggcgcat tagtccaaac gttgcgaatc actagtgctg gggtgcgagg 3180 acctgaagtt ggaccactat actacaacat gacaaaggca gcaactctca ttgacctgac 3240 gttcttcaca ccaggcacat ttctgatctc aataggctgc gcagctactt cgtatacttc 3300 ggagctagtc ctgggaggag ccacgctgaa ctcacgaaca ctcactgcca caggagccgg 3360 gttttccggg tcctttaacg tcactgtgac caagccctta gatggcttac gcatacaagg 3420 aaccggattc ggtgactgta tgacgtttgc tgtccgcgcg agggtggcca actctgttac 3480 tgtctagctg tggctggctg gaggataaga agctaaccac ttcatgtcga taatcagtct 3540 tgacggagag tttgattgtc ctccttatca acccacctca tcccgctttc acttcactca 3600 caaaacgcgc aagtctgcta tttgtatcgg tccttctact ttcggcaaat tatggcgagt 3660 cccgagggct gggtattaca ccccaaccga tgtgaccttt gtggttacgc cacatatctc 3720 cgagaaagct ggcgttatgg cgactgtcaa actcatagac gcatccgaca tgagcccatc 3780 ccgagtgctg ttcgagacca aggcgttcaa ccttggccat gggacggtac tggaggggtc 3840 tcaattgccg ttttgcctgc caatcgggga atatcctata cacttcgagg tcacggtgtc 3900 acgatcacag tttcggggag aacggacaat gtactcaaca tcactcgagt ggcaaatgat 3960 gtgttctccc accccgttat ccagggttcg atctgtgttc gcggttgcgc accaaccagt 4020 gttggatgcg gtcccgaatt tctcaatgaa aaccaaaaag aagtctagcg tcctgtccgg 4080 tggtaagggt caagcgacag aaaagaggat tttggctggt ggtggtacgg cccggggagt 4140 ggttcccccg ggatgcgtag cgccagctga aggaatccca gtaatcgcca ctatagaaga 4200 ccactaggac agcatgtact ccacgcttcg gcggggctat aaggagtaca tgataccccc 4260 ccctatcttt cacccagctt gctggggtag ccc 4293 //