ID EF589100; SV 1; linear; genomic RNA; STD; VRL; 3709 BP. XX AC EF589100; XX DT 11-APR-2008 (Rel. 95, Created) DT 11-APR-2008 (Rel. 95, Last updated, Version 1) XX DE American grass carp reovirus strain AGCRV_PB01-155 segment 3, complete DE sequence. XX KW . XX OS American grass carp reovirus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Aquareovirus. XX RN [1] RP 1-3709 RX DOI; 10.1016/j.virol.2007.12.006. RX PUBMED; 18191982. RA Mohd Jaafar F., Goodwin A.E., Belhouchet M., Merry G., Fang Q., RA Cantaloube J.F., Biagini P., de Micco P., Mertens P.P., Attoui H.; RT "Complete characterisation of the American grass carp reovirus genome RT (genus Aquareovirus: family Reoviridae) reveals an evolutionary link RT between aquareoviruses and coltiviruses"; RL Virology 373(2):310-321(2008). XX RN [2] RP 1-3709 RA Mohd Jaafar F., Goodwin A.A.E., Belhouchet M., Merry G., Fang Q., RA Cantaloube J.F., Biagini P., De Micco P., Mertens P.P.C., Attoui H.; RT ; RL Submitted (02-MAY-2007) to the INSDC. RL Arbovirology, Institute for Animal Health, Ash Road, Pirbright, Woking, RL Surrey GU24 0NF, UK XX DR MD5; b7f4a4fc72b6569e33e9a76c2bcaa3d3. XX CC GenBank Accession Numbers EF589098-EF589108 represent the complete CC genome of American grass carp reovirus strain AGCRV_PB01-155. XX FH Key Location/Qualifiers FH FT source 1..3709 FT /organism="American grass carp reovirus" FT /segment="3" FT /host="Ctenopharyngodon idella" FT /strain="AGCRV_PB01-155" FT /mol_type="genomic RNA" FT /country="USA" FT /db_xref="taxon:465447" FT CDS 17..3664 FT /codon_start=1 FT /product="VP3" FT /db_xref="GOA:B2BNE1" FT /db_xref="InterPro:IPR013087" FT /db_xref="UniProtKB/Swiss-Prot:B2BNE1" FT /protein_id="ABV01041.1" FT /translation="MPRRPRRNAKTSDKAEDAQTLVAPAANASVSSTVNTTTSPTLAAG FT NESQQRAGIDPNQAGSAGVGDAAPSSRVDNDGDVITRPTSDSIAAIANATKPAAVINNA FT QATALVPTSNPHAYRCNVCNAEFPSMSAMTEHLRTSHRDEPSTLLATPVINAAIQAFLQ FT AWDGLRLLAPDVSSEALSKYLDSTVDSSPDLIVEDQGLCTSFMLIDNVPASHLSPELIG FT FTWFMQMYQMTPPLPEGAVNRIVCMTNWASLGDPSRGIEVRLPPPTDNTVHAYKTVLSQ FT GYVASSQFSPLTFRANTLLMLTQFVLSNLKINKSSTFTSDVTTLTVGRMICSFEARPEL FT LALAYPGRAVLPVNTKNAQFLATAIPDRIGRIDRANLIGGEVSASVECMELCDSLTLYI FT RENYLMLLRSMHQDPTRIVQIVNECARNLLNSSIPVNLRPSILCPWFASTADLRLQQAI FT HLVNISSNTAAALPQVEALSSLLRSVTPLVLNPTILTNAITTISESTTQTISPISEILR FT LLSPTGNDYAAFWKCIASWAYNGLVQTVLSEDAFPDSSQSITHLPSMWKCMLLTLAAPM FT TSDPHSPVKVFMSLANLLAQPEPIVINVDGMHQTTPASQFSHPGVWPPGFINPAQIPVA FT QAPLLRAFADHIHANWPQPSDFEYGSAAQGSGNLFIPPNRMVYPWPNAPLPRMTVAATF FT DSAMSQWISTTIAFFIRVVNAPIMAPTVNDLTRRTITGVLTAMRQVKTMTPFYIQHMCP FT TELAVLGSITLVPPFQVPFTRLVQNDAITNVLVARVDPTQRGDAAVDIRATHATFSAAL FT PVDPASIVVAMLCGQTPTNLIPSHHYGKAFAPLFTSNAMFTRNQRAVITREALVCARSI FT VAQCQDDGFNVPRPLAGLRQFDITSAAAAEIWHAVNDAFKTAFDIDGALLDGMGLYGDP FT RIADISVAYLQYDGRVTREHVPPDQSFIHRALLTTENTFLAEMNLFNVGAGDIFLIQTP FT TNGNWAPMVPVAHPPFARGGPNVNVVGNHGTLAMRPNGLEPQLIDNAGVPRDIAGDWIY FT PIDVLQVSVSTFRDYVWPLVVAGRVRVRIEIPHYVYTTHYHQPQTTFTDAQLVETWLAG FT IDPTGIPPIPFSIPIPQVGACITSRRVYHVFAAQNNNNSLFSTNSSSIATVFGEDAGVS FT PARWPALVDPNYQFGTNELPNRITLYGSLFRYNFTYPSLSGVMFMRSAE" XX SQ Sequence 3709 BP; 862 A; 1242 C; 801 G; 804 T; 0 other; gttttataca tccacaatgc cgcgccgccc acgtcgtaac gctaagacct ctgacaaagc 60 agaggacgca caaacattag tcgcccccgc agctaatgct tctgtatctt caactgtcaa 120 caccaccaca tcacccactc tcgcagccgg taacgagagt cagcaacgcg ctggtatcga 180 ccccaaccaa gcaggttccg caggagtagg agacgccgcc ccctcttcac gagtggataa 240 tgatggagac gttatcacca gacccacatc agatagtatc gctgccatag cgaacgctac 300 taagcccgca gcagttatca acaatgctca agctaccgca ctggtaccca catccaaccc 360 gcacgcctat cgctgcaatg tatgcaatgc ggagttccca tcaatgtccg ccatgacaga 420 gcacctgcgc acctcacacc gtgacgagcc gtccaccctc ctcgccacgc ccgtaatcaa 480 cgccgcgatc caagcattcc tgcaagcatg ggacggtcta cgcctgctcg ctcccgatgt 540 ttcgtctgag gcgctttcca aatatctaga ttccaccgtt gacagcagcc cagacctgat 600 cgttgaggac caaggactat gcacgtcctt catgctcata gacaacgtcc cagcctccca 660 tctgtcacct gagctaattg gattcacgtg gttcatgcag atgtaccaga tgacgccccc 720 cctgccagaa ggtgctgtta acagaatagt gtgcatgacc aattgggcat cactcggtga 780 tccttcgcgc ggtattgagg tacgtctccc tcctccaacg gacaacacag tccatgctta 840 caagaccgta ctgtcgcaag gatacgtggc gtccagtcaa ttcagtccac ttacattcag 900 ggccaataca ttgctgatgc taacacaatt cgttttatcc aacctcaaga tcaacaagtc 960 atcaacgttc acctctgatg tcaccacgct caccgtcggt cgcatgattt gctcattcga 1020 agccagaccc gaactcctcg ctcttgccta ccccggtcgc gccgtccttc ccgttaacac 1080 taagaacgcc cagttcctgg ctaccgccat cccagatcgt ataggcagga tagacagagc 1140 caacctaatt ggtggagaag ttagcgcttc cgttgagtgc atggaactat gcgactcact 1200 cactctatac atccgtgaga attacctcat gctactacgc agcatgcatc aggaccctac 1260 acggattgtt cagatcgtta atgagtgcgc gcggaacttg ctcaactcgt ccatccccgt 1320 caacttgcga ccgtcaatcc tgtgcccatg gtttgcgtcc actgcagatc tgagactgca 1380 acaagccatt cacctggtga acatttcctc caacaccgcc gccgcgctgc cacaggtcga 1440 ggcactatcc tcacttctac gatccgtcac accactggtt ctcaatccca ccatcctcac 1500 aaacgcgatc accaccatct cagagtctac cacacaaacc atttcaccga tctccgaaat 1560 cctgagatta ctctcaccga ccggcaacga ctatgcggcc ttttggaagt gcatcgccag 1620 ttgggcatat aacgggctcg tccaaaccgt actgtctgaa gatgcgttcc ccgacagttc 1680 tcagtcgatc acccatcttc cttctatgtg gaagtgcatg ttgctgacat tggccgcacc 1740 catgacgtca gacccccact ccccagtcaa agtgttcatg tcactggcga acctgctcgc 1800 tcaaccggag cccatagtga tcaatgtgga cggcatgcat caaacgaccc cggcatccca 1860 gttcagccac cctggtgttt ggccacccgg attcatcaac cccgctcaga ttcctgtagc 1920 tcaggctcca ctcctacgcg cctttgccga ccacatccac gctaactggc ctcaacccag 1980 tgattttgag tatggcagcg ctgcacaagg atccgggaac ttattcattc cgcccaaccg 2040 catggtctac ccatggccca acgctccact accgcgtatg accgtagccg ccacatttga 2100 ctccgccatg tcccagtgga tatcgacgac gatcgccttc ttcatcagag tcgtcaacgc 2160 accaatcatg gctccaactg ttaacgactt gacaagacgc acaattacag gggtcttgac 2220 agccatgcgc caagtgaaga ctatgacacc attctatatc caacacatgt gccccactga 2280 actcgctgtg ctcggatcaa tcaccctcgt tccaccattc caggtcccct tcaccagatt 2340 ggtccagaac gacgccatca ccaatgtcct agtcgcccgc gtcgacccta cccagagagg 2400 agatgccgcc gttgacatta gagccacgca cgctaccttc tcggcagcgc tcccagtcga 2460 tccagcatcc atcgtcgtag ccatgttatg cggccagacc ccgaccaacc tgataccgtc 2520 ccaccactac ggtaaggcgt tcgcgcccct attcacgtcc aacgcgatgt tcacacggaa 2580 tcagcgcgct gttatcactc gcgaagcctt ggtgtgcgca cgcagcatcg ttgcacagtg 2640 tcaggatgac ggcttcaacg tcccacgccc cctggccggt ctccgccagt tcgacataac 2700 gtccgccgcc gccgcagaga tatggcacgc tgtaaatgac gccttcaaga ccgcatttga 2760 catcgacggt gccttactcg acgggatggg gctgtacggc gatccgagaa tagctgatat 2820 atccgttgca tacctgcagt acgacggccg cgtgactaga gagcatgtgc ccccagacca 2880 atcgttcata caccgtgcgc tgctgaccac tgagaacaca ttcctggctg aaatgaacct 2940 gttcaacgtc ggcgcaggtg acatattcct catccagacc cccactaatg gaaactgggc 3000 acccatggtt cctgtcgccc atccgccatt cgcccgggga ggacccaacg tcaacgtcgt 3060 cggcaaccac ggtacgctcg ccatgcgtcc taacggattg gaaccccaac tgattgacaa 3120 tgctggtgtg ccacgcgaca ttgccgggga ctggatctat cccattgacg ttctccaggt 3180 gtccgtttcc acgttcagag actacgtgtg gccgttagtt gtcgccggga gggtcagagt 3240 tcgcattgaa ataccccact atgtgtacac cactcactat catcaacccc aaaccacatt 3300 cactgatgcg cagctggttg aaacatggct tgcagggatc gatcccacag gtatcccgcc 3360 gatacccttc tccataccca ttccccaagt tggtgcctgc atcacgtcac gccgtgtata 3420 tcacgtcttc gccgcacaga acaacaacaa ctccctgttc tccacaaact catcctccat 3480 tgctacagtg ttcggtgaag atgctggagt ctcgcccgcc cgttggcccg ccctagtcga 3540 tccaaactac cagtttggca ccaacgaact acctaaccgt atcactctat acggatccct 3600 cttccgatat aacttcacct acccctcatt atccggcgtg atgttcatgc gttccgctga 3660 gtaaccggag atcttaggag acgtgtcccg cggggtggat acattcatc 3709 //