ID EF584665; SV 1; linear; genomic RNA; STD; VRL; 2914 BP. XX AC EF584665; XX DT 23-MAY-2007 (Rel. 91, Created) DT 06-MAR-2008 (Rel. 95, Last updated, Version 2) XX DE Citrus variegation virus segment RNA2, complete sequence. XX KW . XX OS Citrus variegation virus OC Viruses; Riboviria; Bromoviridae; Ilarvirus. XX RN [1] RP 1-2914 RX DOI; 10.1007/s00705-007-1090-2. RX PUBMED; 18074099. RA Li W., Adkins S., Hilf M.E.; RT "Characterization of complete sequences of RNA 1 and RNA 2 of citrus RT variegation virus"; RL Arch. Virol. 153(2):385-388(2008). XX RN [2] RP 1-2914 RA Li W., Hilf M., Adkins S.; RT ; RL Submitted (25-APR-2007) to the INSDC. RL Horticultural Research laboratory, 2001 South Rock Road, Fort Pierce, FL RL 34945, USA XX DR MD5; 228908fe775f652626b7b06b1844b84f. DR EuropePMC; PMC5491605; 28713347. XX FH Key Location/Qualifiers FH FT source 1..2914 FT /organism="Citrus variegation virus" FT /segment="RNA2" FT /mol_type="genomic RNA" FT /isolation_source="young leaf tissue" FT /db_xref="taxon:37127" FT 5'UTR 1..72 FT gene 73..2445 FT /gene="s2gp1" FT /note="CVVs2gp1" FT CDS 73..2445 FT /codon_start=1 FT /gene="s2gp1" FT /product="putative viral polymerase" FT /db_xref="GOA:A5JVP5" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:A5JVP5" FT /protein_id="ABQ45981.1" FT /translation="MDAYCLLSDLCDIKIFASTFNVEQCFEISEAVATNYLQVWMFSRI FT LVPVLKFHLSGEVLLDRITDVFREVLGCEDEPNDDGYTPTFIRYDDDDDEPPPEAYLPI FT EEREEIHAATFLGHEHWASVTSGSDFYDDLETSFDETINDDMQKDVMSNMPADYQIMWN FT DGAVDAVWSSRFECEEPPKPKFKPQSTDKGCDPVVIQAAIDDIFPFHHEMDDRYFQTLV FT ETQDISLEVSKCWIDASNFRDFVKGQDSYAIPAIQSGATSRRVHTQREALLAVKKRNMN FT IPELQSTFDLDAEVNTCLKKFLSRVVDLPRLRRLQPMTGIEVEFFNQYLLGKNPPLKEY FT QGPLPLCSLDKYMHMVKTIVKPVEDNSLKFERPLCATITYHKKGIVMQSSPLFLSAMSR FT LFYVLKSKIHIPSGKWHQLFTLDAEKFDAAKWFKEVDFSKFDKSQGELHHKVQEKIFEC FT LKLPPGFVEMWFTAHERSHITDREAGIGYSVDFQRRTGDANTYLGNTLVTLICLARVYD FT LCDPNITFVIASGDDSLIGSVNELPRGSEDLFTTLFNFEAKFPHNQPFICSKFLVSVDL FT ADGGREVIAVPNPAKLLIRMGRRDCQFQALDDLYTSWLDVIYYFRDSRVCEKVASLCAY FT RQTRRSSMYLLSALLSLPSCFANKKKFKWLCYHLTEQECLKITKQPGSAHVIKKNECSN FT ESVKNKIFPRRNRGCWEFVPKVKTDDNYRYIPVGDLDVNRSPSVSNSDCGSGKRSDTAG FT SINSKNTRPRNRFRAEGVHQPSGRYSNRLPPNNRRST" FT gene 2126..2722 FT /gene="s2gp2" FT /note="CVVs2gp2" FT CDS 2126..2722 FT /codon_start=1 FT /gene="s2gp2" FT /product="putative 2b protein" FT /db_xref="UniProtKB/TrEMBL:A5JVP6" FT /protein_id="ABQ45982.1" FT /translation="MLSRKMNAQTKVSKIKFSRDVIVDAGSSFPKLKPMIITGIFLLVI FT LTSTEARQFPILTAVPESAPTPPARLIVKIPDLAIDFELKEFTNPAVVIQTVYRRIIGE FT VPKGWYGLKSWSSSNYGDVVTGLKRAARAKVHFSIPDSDWAYTLNLSEVVSGFALPKLP FT IPEKYLRMPISYEMDVSAFGDRISDRVPSPWYLVQ" FT 3'UTR 2723..2914 XX SQ Sequence 2914 BP; 785 A; 568 C; 670 G; 891 T; 0 other; gtattgtgca gtattatttt acgcacgacc cggattaatc agttttctga gtatataccc 60 gatagaaact caatggatgc ttactgtctt ctttctgatt tgtgtgacat taagatcttt 120 gcctcgacgt tcaatgttga gcaatgtttt gagatcagtg aagcagtggc tacaaactat 180 cttcaagttt ggatgttttc ccgaattttg gtaccagtat taaagttcca cctgagtggt 240 gaagttttgc tggaccgtat tacggatgtt ttccgcgaag tacttggttg cgaagacgag 300 cccaatgatg acggatatac accgactttc attcgttatg atgatgatga cgatgaaccc 360 cctccggaag cgtacctgcc tattgaagag cgcgaggaaa ttcacgcggc aacgtttcta 420 ggtcatgaac attgggccag tgttacctcg ggatcggatt tttacgacga tcttgagacg 480 tcattcgacg agaccatcaa tgatgatatg caaaaagacg taatgtccaa tatgccggct 540 gattatcaaa taatgtggaa tgatggtgct gttgatgccg tgtggtctag tcggtttgaa 600 tgcgaagaac caccaaaacc taaattcaag cctcagtcta ccgataaggg ctgcgatcca 660 gtggtcattc aagcggcgat tgacgacata ttcccatttc atcatgagat ggatgataga 720 tacttccaaa ctttagtgga aacgcaggat atttccttag aagtctctaa gtgttggatt 780 gatgcttcga atttcagaga cttcgttaag ggtcaagatt cttatgctat tcctgcgata 840 caatctggtg ccactagcag gcgcgttcac acacagcgtg aagcgctttt ggcagtgaag 900 aagcgcaata tgaatattcc agagttgcaa tccacttttg atcttgatgc ggaagtcaac 960 acttgtttga agaaatttct gtcacgcgtg gttgatcttc caagattgag acgacttcaa 1020 cctatgactg gtattgaagt ggaatttttt aatcaatatt tattgggaaa aaatcctccg 1080 cttaaagaat accaaggtcc tttgccattg tgttctcttg ataagtatat gcacatggtg 1140 aagacgattg tgaagcctgt tgaagataat tcgttgaagt tcgaaagacc gctttgtgcc 1200 acgattactt atcataagaa gggtatcgtg atgcagtcct caccgttgtt tttgagtgct 1260 atgtcgagac tattttatgt cttgaaatca aaaattcata ttcctagtgg gaagtggcat 1320 caacttttca cgttagatgc tgagaaattc gacgcggcta aatggtttaa ggaagtcgat 1380 ttttcaaagt ttgacaaatc acaaggtgaa ttgcatcata aagtgcagga aaagattttt 1440 gaatgcttga aattacctcc ggggtttgtg gagatgtggt ttactgcaca cgagcgatca 1500 cacatcactg atagagaagc tggtattggt tattccgttg attttcaacg acgaacgggt 1560 gatgctaata cttatctggg taacacttta gtaaccctca tatgtttagc aagagtttat 1620 gatttatgtg atcccaatat cacctttgtt atagcttctg gtgatgattc cttgattgga 1680 agtgtgaatg aattgcccag aggatcagag gatttgttca cgacgctttt caattttgaa 1740 gcgaagttcc cgcacaatca accttttatt tgttcaaaat ttttggttag tgttgatctt 1800 gcggatggtg gtcgagaggt aatcgccgtt cctaacccag cgaagttgtt gattcgtatg 1860 ggtaggagag attgtcaatt ccaagcccta gacgatttat atacctcatg gctcgatgtg 1920 atttactatt tccgagattc ccgagtttgt gagaaagtcg cttctttatg tgcttaccgt 1980 cagactcgaa ggtcttcgat gtacttattg agtgctttgt taagtttacc cagttgtttt 2040 gctaataaaa aaaaatttaa atggctctgt tatcatttaa cagagcaaga gtgtctgaag 2100 attacaaaac aacctggaag tgctcatgtt atcaagaaaa atgaatgctc aaacgaaagt 2160 gtcaaaaata aaattttccc gcgacgtaat cgtggatgct gggagttcgt tcccaaagtt 2220 aaaaccgatg ataattaccg gtatattcct gttggtgatc ttgacgtcaa cagaagcccg 2280 tcagtttcca attctgactg cggttccgga aagcgctccg acaccgccgg ctcgattaat 2340 agtaaaaata ccagacctcg caatcgattt cgagctgaag gagttcacca acccagcggt 2400 cgttattcaa accgtttacc gccgaataat cggcgaagta cctaaaggtt ggtatggttt 2460 aaagtcctgg tcttcctcca attatggaga tgttgtgacg gggctaaaaa gggccgcacg 2520 ggctaaagtg catttttcaa ttccggattc tgattgggct tatacgctaa atctatccga 2580 agtggtttct gggttcgcgc tacccaagtt accaattcct gagaaatatc tcaggatgcc 2640 catttcctat gaaatggatg tttctgcctt tggtgacaga atttctgatc gagtgccatc 2700 cccgtggtat ctcgttcaat gatgtgttct ttcatggaat ctagcaagga gccctcaggg 2760 gtgcactcag tgcctagtcc acgctaagtc tatatgccca cctttgctac tccgggtgga 2820 tgctttaagt gcatgtagat gcctatattt gaaataatat agatgcccag actctctctc 2880 ttggagagag aatggatgcc tccgaaggag atgc 2914 //