ID EF584664; SV 1; linear; genomic RNA; STD; VRL; 3433 BP. XX AC EF584664; XX DT 23-MAY-2007 (Rel. 91, Created) DT 06-MAR-2008 (Rel. 95, Last updated, Version 2) XX DE Citrus variegation virus segment RNA1, complete sequence. XX KW . XX OS Citrus variegation virus OC Viruses; Riboviria; Bromoviridae; Ilarvirus. XX RN [1] RP 1-3433 RX DOI; 10.1007/s00705-007-1090-2. RX PUBMED; 18074099. RA Li W., Adkins S., Hilf M.E.; RT "Characterization of complete sequences of RNA 1 and RNA 2 of citrus RT variegation virus"; RL Arch. Virol. 153(2):385-388(2008). XX RN [2] RP 1-3433 RA Li W., Hilf M., Adkins S.; RT ; RL Submitted (25-APR-2007) to the INSDC. RL Horticultural Research laboratory, 2001 South Rock Road, Fort Pierce, FL RL 34945, USA XX DR MD5; 560c1cb527daa66427f8484e9696626e. XX FH Key Location/Qualifiers FH FT source 1..3433 FT /organism="Citrus variegation virus" FT /segment="RNA1" FT /mol_type="genomic RNA" FT /isolation_source="young leaf tissue" FT /db_xref="taxon:37127" FT 5'UTR 1..72 FT gene 73..3303 FT /gene="s1gp1" FT /note="CVVs1gp1" FT CDS 73..3303 FT /codon_start=1 FT /gene="s1gp1" FT /product="putative viral replicase" FT /db_xref="GOA:A5JVP4" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:A5JVP4" FT /protein_id="ABQ45980.1" FT /translation="MDTIVQHESSVLRVDDLINDTIRRNAARPETAVGRLVSDAAVQVV FT ARQCDLTPAKPLNVSFQLSPEDQNALRRDFPGRELQFRNSSYSSHSFAAAHRVCETDYI FT YGRFQTERTTIIDIGGNFCTHSKMGRDNVHSCCPILDVRDGARYTDRFMSVAGSLEKQP FT ERELRLNYCSNRFEDCDVSAPWAMAIHSISDIPITTVVKHCFRRGVKKLIASIMMDPMM FT LVATKGFMPRLNVQWEVETDEKEKSRRISFHFVDAPGLSYSHNYDVLMQYMTCNQVIIN FT GKAAYRVERVADLSGVFIVEITLAATAGIERLDLVPMRDVSCAWMTSLRRKTLVRVAIP FT QYRHSWEIKYVIADTDFVRRVAEVSFRQYKPDTPLEDLVKSVATMISSASNHCIINGVT FT MQTGTPLAIEDYVPMAVTFVAFAMSRYKSIKEGVKMVKQRGTNICDPNDHYDYEKDGSD FT VKNFSTHVIPMKNTIKSLFFPMKAKINDNSMLIYSQSLMTTVVDEIKTLLGWDVWDTDD FT AVIQSLPSFYKMEDVFQVTSDHYCLSHVLSVDWWLEGLYDDYDVLRRAHKKKLEEEESH FT KTKIENALLKIAEVLEKPDVDDGLKQLKTLPIINSLLEKKVEEIVTKPQCRDSEKPHIN FT PYADAIKEAIAYYHELEVVNTRNLRGVGDYLFWRTKSSYASVWGADESRVVLEPMARKF FT YSRDKNVPIPEYERGMTSDGFISLVWKDGEITRETWSSLSKYAVVLFDQSCVFDAGSRL FT LPGLNKALVMDANFKVVIEDGVAGCGKTTSLLKQAKPDSDLLLAANRETAKDAKNSGII FT PDALLYRVRTVDSYLMLKNWFTAGRLLVDECFLVHAGLIYAAAALARVKEVIAFGDTKQ FT IPFVSRIPAVTLRHASVIGTLKPRTVTYRCPRDVTAVLSEKFYNTKVKTFNPVKTSLDL FT ISINSGMEIPVVKDALYISHTKADKFALKRLPGMSNVDVLTTHEAQGKTRDNVILVRLS FT RTTHLLYSGKMPEAGSSHNLVGLSRHKKSLKYYSIFADDPDDQIASGIRWSKSLDEQEL FT SQYRAAESVSSMKPSEGSSGMCSAPGLS" FT 3'UTR 3304..3433 XX SQ Sequence 3433 BP; 951 A; 668 C; 797 G; 1017 T; 0 other; gtattgtgca gtattatttt acgcacgacc cggattaatc agttttctga gtatataccc 60 gttagaaact caatggacac aatcgttcag catgaatcaa gtgttcttcg tgtcgatgat 120 cttatcaacg acacgatacg gagaaatgct gcacgccccg agacggccgt tggaaggctt 180 gtctcggatg ccgctgttca agtagtcgcc agacaatgcg acttgactcc agcgaagccc 240 ctcaacgttt catttcagtt gtcacccgaa gatcagaatg cgttgagaag agattttcct 300 gggagagaac tccagttcag aaattcatca tattcgtctc attcttttgc ggctgcgcac 360 cgcgtgtgtg agacggatta catttatgga cgtttccaga cggaacgtac caccatcatc 420 gatataggag gaaatttttg cacccatagt aagatgggta gggataatgt ccattcatgt 480 tgccctattc tcgatgttcg tgatggtgct aggtataccg acagattcat gtctgttgct 540 ggatctttgg agaagcaacc agagagagaa ttgcgcttga attattgctc caatagattc 600 gaagattgtg acgtttccgc accttgggcg atggcgatac actctatttc tgacatacct 660 atcactaccg tagtgaaaca ttgttttaga agaggagtaa aaaaactcat tgcttccata 720 atgatggatc ctatgatgct tgtcgctact aaaggtttca tgccccgttt gaacgttcaa 780 tgggaagttg agaccgatga gaaagaaaaa tcccgacgaa tttcttttca tttcgtcgat 840 gctcccgggt tgtcatattc tcataattat gacgtattaa tgcaatacat gacttgcaat 900 caagtcataa tcaatgggaa ggccgcgtac agagttgaac gcgttgcaga tctatctggt 960 gtttttattg ttgaaatcac cttggcagca actgctggga ttgaaagatt ggatctagtg 1020 cccatgcgcg atgtttcatg tgcatggatg acgtcgttaa gacgaaagac cctagtgagg 1080 gtggccatac ctcaatatag gcattcatgg gaaattaaat atgtgattgc tgacacggat 1140 ttcgtcagaa gagtggctga ggtttcattc cgtcaataca agcctgacac accattggaa 1200 gatttagtga agtctgttgc gacgatgatt tcctctgctt ctaaccattg catcattaat 1260 ggtgtgacca tgcaaactgg tactcctttg gccattgaag attatgttcc aatggctgtt 1320 acctttgttg cttttgccat gtctagatac aaatcaataa aggaaggagt gaaaatggtt 1380 aagcagagag gtactaacat ttgtgatcct aatgatcatt acgattatga aaaagatgga 1440 tccgatgtta aaaatttttc cacccatgtt attcccatga aaaataccat caagtccctt 1500 ttttttccca tgaaggcaaa aatcaatgat aattccatgc tgatttatag tcaaagtctc 1560 atgacgactg tcgtcgatga gataaaaact cttcttggat gggatgtttg ggacactgat 1620 gatgcagtca tacaatctct accttccttt tacaaaatgg aagatgtttt ccaagttacc 1680 tccgaccact attgtttatc acatgtatta tctgttgatt ggtggttgga gggattgtat 1740 gatgactatg acgttttacg aagagcacac aagaaaaaac ttgaagagga agaatctcac 1800 aaaactaaaa ttgagaatgc cttattgaaa attgctgagg ttttggagaa gcctgatgtc 1860 gatgacgggc taaaacagtt aaaaacattg cccatcatta attctctttt ggagaagaag 1920 gtggaagaaa ttgttactaa acctcaatgc agggattctg aaaaacccca cattaatccc 1980 tatgctgatg cgatcaagga agcaattgct tattaccacg agcttgaggt ggtaaatacg 2040 cgcaatttac gaggagttgg agattacctc ttttggcgca cgaagtcgag ctatgccagc 2100 gtgtggggtg ctgatgagtc tagagtggtt cttgaaccta tggctaggaa gttctactct 2160 cgagacaaaa acgttcccat ccccgaatat gagcggggta tgacgagtga tggtttcatt 2220 tcccttgttt ggaaggatgg tgagatcacc agggagacgt ggagttctct ttccaaatac 2280 gccgttgttt tgttcgacca atcgtgtgta tttgacgccg gctcacgact tttaccaggg 2340 ttgaataagg ccctagttat ggatgccaat tttaaggtcg tgatcgaaga tggtgtggct 2400 ggatgtggga aaacaacatc tctactcaag caagcaaaac ctgattcgga tttgttgtta 2460 gcggccaacc gtgagaccgc aaaggatgca aaaaacagtg gaattattcc agatgctctt 2520 ttatatcgag ttaggactgt tgattcctac ttgatgttga agaattggtt cactgctggt 2580 cgattactag tagatgaatg tttcctggtc catgctgggt tgatctatgc ggctgccgcc 2640 ttggcacgag tgaaggaagt cattgctttt ggtgatacca agcaaattcc attcgtgtct 2700 cgtattccag cggttacctt acgtcacgct tcggtaatcg gtacgttgaa gcctaggact 2760 gtgacttata gatgtcctag agatgttacc gctgttttaa gtgagaaatt ttataatact 2820 aaagttaaaa ctttcaatcc ggtgaaaact tcattggatt tgatcagcat aaattctggt 2880 atggagattc ccgtggtgaa ggatgcttta tacatttccc atactaaggc tgataagttt 2940 gctttaaaga gattaccagg tatgagcaac gttgacgtgc tcactactca tgaagcacaa 3000 gggaaaacgc gtgacaatgt tatccttgtt agactaagca gaactactca tttgttgtac 3060 tctgggaaaa tgccggaagc cggtagttct cataatttag ttggtctgtc ccggcataaa 3120 aagagtttga aatattactc catttttgct gatgatcctg atgatcaaat tgcatctgga 3180 attcgttggt ctaaaagttt agacgaacaa gagctgtccc aatatagggc agctgagagt 3240 gtttcttcta tgaaacctag tgaagggtcc tctgggatgt gctcagcacc tggcctaagc 3300 taagtccata tgcccatctc tgctactccg gatggatgtc tatatgcccg ctatggatgc 3360 ctattattga aatataatag atgcctaata ctctctctca gggagagagt ttagatgcct 3420 ccgaaggaga tgc 3433 //