ID EF583556; SV 3; linear; genomic RNA; STD; VRL; 2171 BP. XX AC EF583556; XX DT 01-JAN-2008 (Rel. 94, Created) DT 20-JAN-2011 (Rel. 107, Last updated, Version 4) XX DE Botrytis cinerea mitovirus 1 S isolate CanBc-1c-78 RNA-dependent RNA DE polymerase (RdRp) gene, complete cds. XX KW . XX OS Botrytis cinerea mitovirus 1 S OC Viruses; Riboviria; Narnaviridae; Mitovirus; unclassified Mitovirus. XX RN [1] RP 1-2171 RX DOI; 10.1094/PHYTO-97-12-1590. RX PUBMED; 18943720. RA Wu M.D., Zhang L., Li G.Q., Jiang D.H., Hou M.S., Huang H.C.; RT "Hypovirulence and Double-Stranded RNA in Botrytis cinerea"; RL Phytopathology 97(12):1590-1599(2007). XX RN [2] RP 1-2171 RX DOI; 10.1016/j.virol.2010.07.010. RX PUBMED; 20674953. RA Wu M., Zhang L., Li G., Jiang D., Ghabrial S.A.; RT "Genome characterization of a debilitation-associated mitovirus infecting RT the phytopathogenic fungus Botrytis cinerea"; RL Virology 406(1):117-126(2010). XX RN [3] RP 1-2171 RA Wu M., Li G., Zhang L., Jiang D., Hou M.; RT ; RL Submitted (27-APR-2007) to the INSDC. RL Department of Plant Protection, Huazhong Agricultural University, Shi Zi RL Shan, Wuhan, Hubei 430070, China XX RN [4] RC Sequence update by submitter RP 1-2171 RA Wu M., Li G., Zhang L., Jiang D., Hou M.; RT ; RL Submitted (27-OCT-2008) to the INSDC. RL Department of Plant Protection, Huazhong Agricultural University, Shi Zi RL Shan, Wuhan, Hubei 430070, China XX RN [5] RC Sequence update by submitter RP 1-2171 RA Wu M., Li G., Zhang L., Jiang D., Hou M.; RT ; RL Submitted (05-APR-2010) to the INSDC. RL Department of Plant Protection, Huazhong Agricultural University, Shi Zi RL Shan, Wuhan, Hubei 430070, China XX DR MD5; ab63eea33505b41893fc25b0e493cc11. XX CC On Apr 5, 2010 this sequence version replaced gi:209974226. XX FH Key Location/Qualifiers FH FT source 1..2171 FT /organism="Botrytis cinerea mitovirus 1 S" FT /host="Botrytis cinerea" FT /isolate="CanBc-1c-78" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:463636" FT gene 477..2060 FT /gene="RdRp" FT CDS 477..2060 FT /codon_start=1 FT /transl_table=4 FT /gene="RdRp" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:A9XN83" FT /db_xref="InterPro:IPR008686" FT /db_xref="UniProtKB/TrEMBL:A9XN83" FT /protein_id="ABU84872.2" FT /translation="MKHLFRIKRKAVIKNSTTRLPDHLWLGYVKVLVWLYDIPSAHRTY FT FFELLNRIQSLRRNSGDTWTVGYLKESHRLSSHWLSGNPDVCSGSIRVSVRGLPLIIPG FT RLRNVIYSRNNINITRALLTLLSTFRVMSATPKLKLSTITDPFNGVNETLPSLEVSRAL FT KNILQGNKFHFKKEDIKDPYSVNRLMDITKADPNGGVSLRNVIIDAYALMKHPKVYASL FT FKDLFLDYALLGDDICIANKAVADNYLLIMRDLGVEINLSKSLISSTGVVEFAKRWRVG FT QTDVSPASPALITRLLSNMNYLPVLILDLVNRGVKTIQNSEKLLSLSDSLHKIKKSITF FT SLIPYYDSEFAKCLLPLKGKDKSFSQKELFALYVHTDRIFNKLGLLEFHKAKDGDQENS FT KLSQSYLYNILDNSKLPLPAITSQIDNILIAQMKTITNVPTRNWLNNRDINLLTFECWH FT SYLIDTLSELSSISKVVPDYTIIKDNEKPDNLEMRRNLLFMQELIKDLKKWNPGIFEII FT PESILKEEEV" XX SQ Sequence 2171 BP; 753 A; 347 C; 349 G; 722 T; 0 other; ggcctaacag cgttagctgt taggtgcttt gtagtgatac aaagcatggt ataacccacc 60 ttcatccact tatattttaa tataagttag tgataatccc agacttattg acaataagtc 120 gatcaatgga aacattgatg tttttgatat taatcaaaaa ccaatattgt ttacactgat 180 agtccattct atctattttc aaaccttaag tggtcagata atagaaccta tcagctatgg 240 tgtatatcac cccgtcagac aattgtctta ggaagtacta taactaccgt aactggataa 300 gatgtgaagt tcccttcctt tgtagcttta atgcaattga gactgtcggt catgaagacc 360 aaacaatata aatattatta atatgcgcac aaaatgggag aagataccta agcagatgaa 420 ttaatttctg ctaccaatcg gtattttata gtcaacttta atttaattat aaacaaatga 480 aacatttatt tagaataaaa agaaaagctg ttataaaaaa tagtactaca cgtttacctg 540 atcatttatg attaggatat gtgaaggtac ttgtatgatt gtatgatata ccaagcgcac 600 atcgaaccta tttctttgaa cttctaaaca gaattcaaag tcttaggcgg aacagtggtg 660 atacttgaac tgtaggatat cttaaagaat cccacagatt gagttctcac tgactatcag 720 gtaatcctga tgtctgttcc gggtcaattc gagtttctgt acgaggacta cctttgatta 780 ttccaggtag attaagaaat gttatatatt ctcgaaataa tattaatatt actcgagcat 840 tgttaacact cttatctact ttccgtgtaa tgtctgctac gcctaagcta aaacttagca 900 caataacaga cccatttaat ggagttaatg agactcttcc ttctttggaa gtttctcgtg 960 ctctaaaaaa tatattacaa ggaaataaat tccattttaa gaaagaggat ataaaagatc 1020 cttattctgt gaatagactt atggacataa caaaagcaga tcctaatggt ggtgtatcac 1080 ttcggaatgt tattattgat gcatatgcat taatgaaaca tcctaaagta tatgcttcac 1140 tatttaagga cttgtttcta gattacgcac ttttaggaga tgatatctgt atagctaata 1200 aagctgtagc agataattat cttttaatta tgcgtgatct aggggttgag attaacctat 1260 ctaaatcttt gatttcatca actggtgttg ttgaatttgc aaaaagatga agagttggac 1320 aaacagatgt ttctccagct tctccagctt taataacaag attattaagt aatatgaatt 1380 accttccagt cttgatatta gatttagtga atagaggtgt gaaaaccatc cagaattctg 1440 agaaattact ttctctttcg gattcattgc acaagattaa gaaaagtata actttttctt 1500 taatcccata ctatgattcg gaatttgcga aatgtttact acccttaaaa gggaaagata 1560 aatctttttc acaaaaagaa ttatttgctt tatatgttca tacagaccga atttttaata 1620 aattaggtct acttgaattc cataaggcaa aagatggtga ccaagagaat tcaaaactct 1680 ctcagtcgta tttatataat atccttgaca atagtaaatt accgttaccg gcaattacta 1740 gtcaaataga taatatatta atagcacaaa tgaaaactat tactaacgtt ccaactagga 1800 actggttaaa taatagggac attaatctat taacatttga atgttgacat tcatatttaa 1860 tagatactct ttcagagtta tcttctattt ctaaggttgt accggattac actatcatta 1920 aagataatga aaaaccagac aacttggaaa tgagacgaaa tctcctcttc atgcaagaac 1980 ttattaaaga tcttaagaag tgaaatccgg gtatatttga aattatacca gaatccatcc 2040 tgaaagagga agaagtttaa tgtgttgcta tcattaaact tacagtattc acatactgtg 2100 cattaacctt atttattttc ctttaaaagc tgcataagca acagtcttag gtctataaac 2160 ggggttaatg c 2171 //