ID EF580100; SV 3; linear; genomic RNA; STD; VRL; 2804 BP. XX AC EF580100; XX DT 04-JUN-2007 (Rel. 92, Created) DT 20-JAN-2011 (Rel. 107, Last updated, Version 4) XX DE Botrytis cinerea mitovirus 1 RNA-dependent RNA polymerase (RDRP) gene, DE complete cds. XX KW . XX OS Botrytis cinerea mitovirus 1 OC Viruses; Riboviria; Narnaviridae; Mitovirus; unclassified Mitovirus. XX RN [1] RP 1-2804 RX DOI; 10.1094/PHYTO-97-12-1590. RX PUBMED; 18943720. RA Wu M.D., Zhang L., Li G.Q., Jiang D.H., Hou M.S., Huang H.C.; RT "Hypovirulence and Double-Stranded RNA in Botrytis cinerea"; RL Phytopathology 97(12):1590-1599(2007). XX RN [2] RP 1-2804 RX DOI; 10.1016/j.virol.2010.07.010. RX PUBMED; 20674953. RA Wu M., Zhang L., Li G., Jiang D., Ghabrial S.A.; RT "Genome characterization of a debilitation-associated mitovirus infecting RT the phytopathogenic fungus Botrytis cinerea"; RL Virology 406(1):117-126(2010). XX RN [3] RP 1-2804 RA Wu M., Zhang L., Li G., Jiang D., Hou M., Huang H.; RT ; RL Submitted (26-APR-2007) to the INSDC. RL Department of Plant Protection, Huazhong Agricultural University, Shi Zi RL Shan, Wuhan, Hubei 430070, China XX RN [4] RC Sequence update by submitter RP 1-2804 RA Wu M., Zhang L., Li G., Jiang D., Hou M., Huang H.; RT ; RL Submitted (15-OCT-2008) to the INSDC. RL Department of Plant Protection, Huazhong Agricultural University, Shi Zi RL Shan, Wuhan, Hubei 430070, China XX RN [5] RC Sequence update by submitter RP 1-2804 RA Wu M., Zhang L., Li G., Jiang D., Hou M., Huang H.; RT ; RL Submitted (05-APR-2010) to the INSDC. RL Department of Plant Protection, Huazhong Agricultural University, Shi Zi RL Shan, Wuhan, Hubei 430070, China XX DR MD5; 4ea0737adcbd926a2476980e26d43a64. DR EuropePMC; PMC4357927; 25595766. XX CC On Apr 5, 2010 this sequence version replaced gi:209514851. XX FH Key Location/Qualifiers FH FT source 1..2804 FT /organism="Botrytis cinerea mitovirus 1" FT /host="Botrytis cinerea" FT /mol_type="genomic RNA" FT /country="China" FT /clone="p1R2a" FT /db_xref="taxon:444193" FT gene 477..2693 FT /gene="RDRP" FT CDS 477..2693 FT /codon_start=1 FT /transl_table=4 FT /gene="RDRP" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:A5YRF7" FT /db_xref="InterPro:IPR008686" FT /db_xref="UniProtKB/TrEMBL:A5YRF7" FT /protein_id="ABQ65153.3" FT /translation="MKHLFRIKRKAVIKNSTTRLPDHLWLGYVKVLVWLYDIPSAHRTY FT FFELLNRIQSLRRNSGDTWTVGYLKESHRLSSHWLSGNPDVCSGSIRVSVRGLPLIIPG FT RLRNVIYSRNNINITRALLTLLSTFRVMSATPKLKLSTITDPFNGVNETLPSLEVSRAL FT KNILQGNKFHFKKEDIKDPYSVNRLMDITKADPNGGVSLRNVIIDAYALMKHPKVYASL FT LELSNVMSPYLGSLLRNQTTIIRAIIDYDPIEWERIKPFMAPIYQNIKDRTLKLVPDLS FT CIGKLSTKEEAAGKVRVFAMVDIWTQSILNPLHKKIFSIIRELPTDGTFDQLKPLDRLH FT ELSTQDRFSFDLSAATDRLPLTLQKDILTLLVSPSFAEAWGTALVGRPYKWKFGTTEDE FT LMYSVGQPMGALSSWGMLALTHHTIVQVAASRAGYKDLFLDYALLGDDICIANKAVADN FT YLLIMRDLGVEINLSKSLISSTGVVEFAKRWRVGQTDVSPASPALITRLLSNMNYLPVL FT ILDLVNRGVKTIQNSEKLLSLSDSLHKIKKSITFSLIPYYDSEFAKCLLPLKGKDKSFS FT QKELFALYVHTDRIFNKLGLLEFHKAKDGDQENSKLSQSYLYNILDNSKLPLPAITSQI FT DNILIAQMKTITNVPTRNWLNNRDINLLTFECWHSYLIDTLSELSSISKVVPDYTIIKD FT NEKPDNLEMRRNLLFMQELIKDLKKWNPGIFEIIPESILKEEEV" XX SQ Sequence 2804 BP; 960 A; 458 C; 473 G; 913 T; 0 other; ggcctaacag cgttagctgt taggtgcttt gtagtgatac aaagcatggt ataacccacc 60 ttcatccact tatattttaa tataagttag tgataatccc agacttattg acaataagtc 120 gatcaatgga aacattgatg tttttgatat taatcaaaaa ccaatattgt ttacactgat 180 agtccattct atctattttc aaaccttaag tggtcagata atagaaccta tcagctatgg 240 tgtatatcac cccgtcagac aattgtctta ggaagtacta taactaccgt aactggataa 300 gatgtgaagt tcccttcctt tgtagcttta atgcaattga gactgtcggt catgaagacc 360 aaacaatata aatattatta atatgcgcac aaaatgggag aagataccta agcagatgaa 420 ttaatttctg ctaccaatcg gtattttata gtcaacttta atttaattat aaacaaatga 480 aacatttatt tagaataaaa agaaaagctg ttataaaaaa tagtactaca cgtttacctg 540 atcatttatg attaggatat gtgaaggtac ttgtatgatt gtatgatata ccaagcgcac 600 atcgaaccta tttctttgaa cttctaaaca gaattcaaag tcttaggcgg aacagtggtg 660 atacttgaac tgtaggatat cttaaagaat cccacagatt gagttctcac tgactatcag 720 gtaatcctga tgtctgttcc gggtcaattc gagtttctgt acgaggacta cctttgatta 780 ttccaggtag attaagaaat gttatatatt ctcgaaataa tattaatatt actcgagcat 840 tgttaacact cttatctact ttccgtgtaa tgtctgctac gcctaagcta aaacttagca 900 caataacaga cccatttaat ggagttaatg agactcttcc ttctttggaa gtttctcgtg 960 ctctaaaaaa tatattacaa ggaaataaat tccattttaa gaaagaggat ataaaagatc 1020 cttattctgt gaatagactt atggacataa caaaagcaga tcctaatggt ggtgtatcac 1080 ttcggaatgt tattattgat gcatatgcat taatgaaaca tcctaaagta tatgcttcac 1140 tattagaatt atccaatgta atgtctccat acttaggatc gttattgaga aatcaaacaa 1200 cgatcataag ggcgattatt gattacgatc ccattgaatg ggaacggatc aaacctttta 1260 tggctccgat ttatcagaac ataaaagatc gaacacttaa actggtgcct gacttaagtt 1320 gtataggtaa actatcaact aaagaagagg cagcaggaaa agtgagagta ttcgctatgg 1380 ttgatatatg aacacagtca atattaaatc ctcttcataa gaagatattt agtattatcc 1440 gtgaacttcc aactgatggt acatttgatc agttgaagcc tttagatcga ttacatgaac 1500 tatctacaca agatagattc agttttgatt tatcagctgc aacagatcga ttacctttga 1560 ctcttcaaaa ggatatcctt acattacttg taagtccatc ttttgcagag gcttgaggta 1620 cagctcttgt cggtagacca tataaatgaa aatttggtac tacagaggac gagttgatgt 1680 attcagttgg tcaacctatg ggggcattat cctcatgagg tatgcttgct ttaactcatc 1740 atacgatagt tcaagtagca gcctcaagag caggatataa ggacttgttt ctagattacg 1800 cacttttagg agatgatatc tgtatagcta ataaagctgt agcagataat tatcttttaa 1860 ttatgcgtga tctaggggtt gagattaacc tatctaaatc tttgatttca tcaactggtg 1920 ttgttgaatt tgcaaaaaga tgaagagttg gacaaacaga tgtttctcca gcttctccag 1980 ctttaataac aagattatta agtaatatga attaccttcc agtcttgata ttagatttag 2040 tgaatagagg tgtgaaaacc atccagaatt ctgagaaatt actttctctt tcggattcat 2100 tgcacaagat taagaaaagt ataacttttt ctttaatccc atactatgat tcggaatttg 2160 cgaaatgttt actaccctta aaagggaaag ataaatcttt ttcacaaaaa gaattatttg 2220 ctttatatgt tcatacagac cgaattttta ataaattagg tctacttgaa ttccataagg 2280 caaaagatgg tgaccaagag aattcaaaac tctctcagtc gtatttatat aatatccttg 2340 acaatagtaa attaccgtta ccggcaatta ctagtcaaat agataatata ttaatagcac 2400 aaatgaaaac tattactaac gttccaacta ggaactggtt aaataatagg gacattaatc 2460 tattaacatt tgaatgttga cattcatatt taatagatac tctttcagag ttatcttcta 2520 tttctaaggt tgtaccggat tacactatca ttaaagataa tgaaaaacca gacaacttgg 2580 aaatgagacg aaatctcctc ttcatgcaag aacttattaa agatcttaag aagtgaaatc 2640 cgggtatatt tgaaattata ccagaatcca tcctgaaaga ggaagaagtt taatgtgttg 2700 ctatcattaa acttacagta ttcacatact gtgcattaac cttatttatt ttcctttaaa 2760 agctgcataa gcaacagtct taggtctata aacggggtta atgc 2804 //