Dbfetch
ID EF577265; SV 1; circular; genomic DNA; STD; VRL; 2743 BP. XX AC EF577265; XX DT 29-MAY-2007 (Rel. 91, Created) DT 29-MAY-2007 (Rel. 91, Last updated, Version 1) XX DE Tomato yellow leaf curl Thailand virus isolate CK18 segment DNA-B, complete DE sequence. XX KW . XX OS Tomato yellow leaf curl Thailand virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2743 RA Tsai W.S., Green S.K., Shih S.L., Lee L.M., Ito H., Kimbara J., Hosoi K., RA Jan F.-J.; RT "First report of Tomato yellow leaf curl Thailand virus in Taiwan"; RL Unpublished. XX RN [2] RP 1-2743 RA Tsai W.S., Green S.K., Shih S.L., Lee L.M., Ito H., Kimbara J., Hosoi K., RA Jan F.-J.; RT ; RL Submitted (24-APR-2007) to the INSDC. RL Virology, AVRDC-The World Vegetable Center, PO Box 42, Shanhua, Tainan, RL Taiwan 74199, ROC XX DR MD5; 64af509249e5ccce746efaab780a3ca6. XX FH Key Location/Qualifiers FH FT source 1..2743 FT /organism="Tomato yellow leaf curl Thailand virus" FT /segment="DNA-B" FT /host="tomato" FT /isolate="CK18" FT /mol_type="genomic DNA" FT /country="Taiwan" FT /collection_date="2007" FT /db_xref="taxon:85752" FT gene 147..1007 FT /gene="BV1" FT CDS 147..1007 FT /codon_start=1 FT /gene="BV1" FT /product="BV1 protein" FT /db_xref="GOA:A5JUS4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:A5JUS4" FT /protein_id="ABQ52674.1" FT /translation="MSLMYFIRKMRVPIRRNSGFNGDRRPSNGSINRWNYPYSGYFGKS FT VGNRVYGMRFGSTTSLRRPVRTTVRRNLFSDQSSSANKGRKTIEEVHDGSDYLLRSNTS FT KVSYISYPPLSRSEFGNRLDAFVKILGFNVSGSVAVRHLEHRDSGAIQGIHGIYCTAVV FT RDKRPCQFSAVEPIVPFPELFGLEKIACSSLRVRDSHRSRFSLVYQKKVVVNSSLATHV FT FKFNYCVKFNRFPFWVSFKDTSDSEPSGLYSNVSKNALIVYYVWLCDSNVTADSYVKYD FT LNYIG" FT gene complement(1014..1847) FT /gene="BC1" FT CDS complement(1014..1847) FT /codon_start=1 FT /gene="BC1" FT /product="BC1 protein" FT /db_xref="GOA:A5JUS5" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:A5JUS5" FT /protein_id="ABQ52675.1" FT /translation="MESRTNNIAYTTSDRTEFQLSNEKTEVTLLFPSTVDQKLSMLLGK FT CLRIDHVILQYRNQVPVNATGHVVIEMHDTRLHEGDSKQAEFTIPIGCNCNIHYYSSSY FT FSPKDPNPWRVLYRVDDTNVVNGVHFCRMQGKLKMSSAKQSSEITFKSPKIEILSKAYN FT MTHIDFWHVPQSKVSRKPVQALSHMRSQSSRYTTDAIPQGRTWASASTVGNNVIEEYPY FT RHLHQLQDATLDPGPSASEVVAGSVKVNDDVINIIKKTVELCMEGSNVSSNAKKI" XX SQ Sequence 2743 BP; 753 A; 511 C; 593 G; 886 T; 0 other; accggatggc cgcggggttt tggtgtccag gcccactttt gacacgtata tcccgttttg 60 aacaatcgta accgttgaat cgtaacacgt ggcactctca taagtcagga ttgtttccat 120 atgtgggtct atatattggc ttgtggatgt ctctcatgta ttttattcga aaaatgagag 180 ttccaatccg gaggaattca gggttcaatg gtgaccgtcg tccttccaat ggttcaatca 240 atcggtggaa ttacccatat tccgggtatt ttgggaagag tgttggcaac cgtgtatatg 300 gaatgcgatt tggtagtacc acctctctcc ggcgaccagt tagaaccaca gttcggagga 360 atttattttc cgaccagtct tcgtccgcca acaagggtcg taaaactatt gaggaagttc 420 atgacgggtc tgactatctt cttcgtagca acacttcgaa ggtgtcttac attagttatc 480 ctcctcttag ccggtcggaa tttggtaacc gtcttgacgc atttgtcaag attttgggat 540 ttaatgtttc tggttcagtt gctgtgagac atttggaaca ccgtgacagt ggagcaattc 600 aaggcatcca tggcatatac tgcacagctg ttgtacgtga caagcgaccc tgtcagtttt 660 ccgctgtaga gcctattgtg ccatttccgg agttatttgg gctggagaag atagcatgct 720 cctcgttacg tgttagggat agtcatagga gtaggtttag tctagtttac cagaagaaag 780 ttgttgtcaa tagctctctt gcgacccatg tttttaagtt taattattgt gttaagttta 840 ataggtttcc gttttgggtg tcatttaaag atacatctga ttctgagcca agtggccttt 900 acagcaacgt atctaagaat gctcttatag tgtattatgt ttggctttgt gactcaaacg 960 taactgcaga ttcgtatgta aagtacgatt tgaactacat tggataaata aatttatatt 1020 ttctttgcat tagaagagac attactccct tccatacata gttcaactgt ttttttaatt 1080 atattaatta catcgtcgtt tactttgacg cttcctgcaa caacctctga cgctgaaggg 1140 cctgggtcga gagttgcatc ttgtagctga tgcaaatgtc tatatgggta ttcctctatc 1200 acgttgttcc ccactgtgct ggcggaagcc caagtacgcc cttgtggaat ggcatctgta 1260 gtgtatctgg aagactgtga cctcatgtgc gatagggctt ggactggttt ccttgatacc 1320 tttgattgag gcacatgcca gaagtctata tgggtcatgt tatacgcctt tgataatatt 1380 tcaatcttcg gggatttaaa tgttatctcc gaggactgtt ttgcagatga catttttaat 1440 ttcccttgca tcctgcagaa gtgaactcca tttaccacgt tagtgtcgtc cactcggtat 1500 agtaccctcc atggattcgg gtctttgggg gagaaatagg aggaggagta gtagtgtatg 1560 ttgcagttgc accctatggg tattgtgaac tcggcctgtt tcgaatcacc ttcgtgtaac 1620 cttgtgtcat gcatctctat gaccacatga ccagttgcat ttacaggaac ttggtttctg 1680 tattggagga tgacatggtc aattctaagg cactttccca gaagcatcga taatttttgg 1740 tcgactgtgg atggaaacaa gagcgtaact tcggtttttt cattggatag ctgaaattca 1800 gtcctatccg acgtcgtata tgcaatattg ttagttctgg actccattat tgatgatggc 1860 aataaaataa tgctaattca tctttttata gacttttcag agtctgtcag gataatggaa 1920 tgtgactagt cgggcccttg cctgcaaatt ccactatctc atgggccaat gcgattcgtt 1980 gatgtatgta attgacatga taagagataa ggtaaatact tggaggtggt tcagccacgt 2040 cgcaaattgg ataatggaag acagctgtct tccatttcca cttgttgttg ttctaagttg 2100 ttaaagatat tttgttgagt tatgtgtgca atagtaatag tttcattaac aactaaatta 2160 aagcctataa aatatttatg tggtactgca gtaccacaat tcaaatccaa ttcgaaggaa 2220 aatttcaatg taaaaatcaa agattcttcg atctcacaag tggtcgtgaa atcgacaacc 2280 cagaataatt gttaactgat ccaacaatct aactaagaca aaacacaaaa cacacacact 2340 tatcttaatc ttatggaaat caggccgcgc agcgacgatg tcccgaaatt taactagaat 2400 tctagaagtg ttaaccctaa tataatataa ttaacgttag aaggatttgt cgttaattaa 2460 tgtcggacaa agggtattga ccagttgcag ctaatagaat taaatttaac aataataatg 2520 caatataatt attgcacata taaagaaaac attaaaatta aatatttaga gagagaaagt 2580 ttagagagaa gttcaatcgg tgtctctcaa ctctctctat gcaatcggtg tctggggtct 2640 tatttatacc tagacactaa atggcattat tgtaattcct aaaaggtatg ataaggccca 2700 attggctagg cccaatttgg aaagcggcca tccgtataat att 2743 //