ID   EF555589; SV 1; linear; genomic RNA; STD; VRL; 2139 BP.
XX
AC   EF555589;
XX
DT   01-MAY-2008 (Rel. 95, Created)
DT   01-MAY-2008 (Rel. 95, Last updated, Version 1)
XX
DE   Turnip ringspot virus isolate M12 RNA-dependent RNA polymerase gene,
DE   partial cds.
XX
KW   .
XX
OS   Turnip ringspot virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Comovirus;
OC   unclassified Comovirus.
XX
RN   [1]
RP   1-2139
RA   Koloniuk I., Petrzik K.;
RT   "Turnip ringspot virus - new comovirus recognized on Chinese cabbage in
RT   Russia";
RL   Unpublished.
XX
RN   [2]
RP   1-2139
RA   Petrzik K., Koloniuk I.;
RT   ;
RL   Submitted (16-APR-2007) to the INSDC.
RL   Department of Plant Virology, Biology Centre Acad. Sci. Czech Republic,
RL   Institute of Plant Molecular Biology, Branisovska 31, Ceske Budejovice 370
RL   05, Czech Republic
XX
DR   MD5; 2bbdfb70ee31c34501f5be037a8a24f0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2139
FT                   /organism="Turnip ringspot virus"
FT                   /isolate="M12"
FT                   /mol_type="genomic RNA"
FT                   /country="Russia"
FT                   /db_xref="taxon:392504"
FT   CDS             <1..2139
FT                   /codon_start=1
FT                   /product="RNA-dependent RNA polymerase"
FT                   /note="RNA pol"
FT                   /db_xref="GOA:B2KL92"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:B2KL92"
FT                   /protein_id="ABS90367.1"
FT                   /translation="HAQQYFDYLAFEEREGDGIARIATLKKGIHIPVPTKTSLVETPAE
FT                   MHLDTPCDKYPSILSNTDPRLEVSGVTDYDPFKAGILKYQNPMGELDQDLLQEVCDEIE
FT                   ETWRDCQEEFETFEEVSLEEAINGIKGMEYMERIPMATSEGFPHILTRSHGEKGKIRFV
FT                   EGDGEDLTLLPNTSVTEALDIMEEHLEHEVPTLIGIECPKDEKLPYRKIFEKPKTRCFS
FT                   ILPMEYNLLVRRRFLKFVRFIMRRRDILPCQVGINPYGMEWTDLAARLKSKGNNILCCD
FT                   YSSFDGLLSKQVMAAMASMINSFCGGDTSIKKKRENLLMACCSRYAICKSTVWRVECGI
FT                   PSGFPLTVICNSIFNEILIRYSFKAIMREQKVPDLIPISFDKYVGMVTYGDDNLLSVSE
FT                   VVKPFFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFKKDRSGFFWNS
FT                   PEEKESLWAQLHYINVTNLEQHEAYKTNLVNVLRELYMWDINECAALRKKALQRVSWLL
FT                   PSDLPTVAQIEKWYASCRGRYVPDSADSINFLLDQEHLGPLLAPQGVQRGVRITDQVRT
FT                   VNLAHENHTTRKPGELWILCQTLYPHSMLPEGVRAINWPLGTGRGGLPTTSWVEENVKR
FT                   PTSEIRKTISAALKRGEQIVFATRDNILPCNMLAVLFLVIEGSIKVETSNMIISAVIQQ
FT                   CKTLGYLVRECDFAFFAT"
XX
SQ   Sequence 2139 BP; 634 A; 399 C; 520 G; 586 T; 0 other;
     catgctcaac agtactttga ttaccttgct tttgaggaaa gagagggtga tggcatagcc        60
     aggatcgcca ctctgaagaa aggcattcat atccctgttc caaccaaaac gtctctcgtg       120
     gaaacgccag ctgaaatgca cctggacaca ccttgtgaca aatatcccag tattttatct       180
     aacacagatc ctcgtcttga ggtttctggc gtgacagatt atgatccttt taaagcaggc       240
     attttgaagt accagaaccc aatgggagaa ctagatcagg atttgcttca ggaagtatgt       300
     gatgaaatag aggaaacatg gagagattgc caggaggagt ttgaaacgtt cgaggaagtg       360
     agtttggaag aagctatcaa tggaatcaaa ggaatggaat acatggaacg aatcccgatg       420
     gcaacgtctg agggctttcc acatatctta acgagatctc atggagagaa agggaaaatc       480
     cgattcgttg aaggtgatgg tgaagacttg actttgttgc caaacactag tgtgacggaa       540
     gcactggaca tcatggaaga gcatttggag catgaagtgc caactttgat tgggatagaa       600
     tgtcctaaag atgagaagct gccatacaga aagatttttg agaagcctaa aacacgttgt       660
     ttttctatac ttccaatgga atacaatctt ttggtgcggc gcaggttctt aaaatttgtc       720
     agatttatca tgaggagaag agatattctg ccgtgccagg ttggtataaa tccgtatggg       780
     atggaatgga cagatctggc ggcacgcttg aagagtaaag gtaacaacat tctttgctgt       840
     gattatagca gtttcgatgg cttgctatcc aagcaggtta tggcagctat ggctagcatg       900
     ataaactcct tctgtggagg ggatacaagc atcaaaaaga agcgtgaaaa tttgctgatg       960
     gcttgttgtt ctcgttacgc catttgcaaa tccactgttt ggcgcgttga atgtggcata      1020
     ccgtctggat ttcccctcac tgtgatatgc aattccattt ttaatgagat tctcatacgt      1080
     tacagcttca aagccatcat gcgtgaacag aaagttccag atctcatacc aataagcttt      1140
     gacaagtatg ttggaatggt tacatacgga gatgataatc tactttctgt tagtgaggtt      1200
     gttaaaccct tctttgatgg gaagaggttg aaagagttct tggccaaaca caaggttgta      1260
     atcacggatg gaaaagataa aaccagtcct taccttctct ttcgtcgctt ggaagattgt      1320
     gattttctga aacgaggttt taagaaggac aggagtgggt ttttctggaa ttcacctgaa      1380
     gagaaggaga gtttgtgggc tcaactacac tacatcaatg tgaccaatct tgaacaacac      1440
     gaggcttaca aaacaaattt ggtgaatgtg ctacgtgagt tgtatatgtg ggacataaat      1500
     gagtgtgctg ctttaaggaa aaaagctcta caacgtgttt cttggctcct accatcggac      1560
     cttcctacag tagctcagat agagaaatgg tatgcttcat gtcgcggacg ttatgtgcca      1620
     gattctgctg actcaattaa cttcctctta gaccaagaac atttggggcc tttgttggca      1680
     ccacaaggtg tacaaagagg agttcgcatc actgatcagg tacgcactgt gaatcttgca      1740
     catgagaacc acaccacacg aaaaccagga gagttgtgga tactgtgtca aacgctatat      1800
     ccccatagca tgcttcctga aggagttaga gcgatcaact ggccacttgg cacaggtagg      1860
     ggaggattgc ccaccacatc ttgggtggaa gaaaatgtca agcgtccgac ttcggaaatc      1920
     aggaaaacca taagtgcagc cctcaaaaga ggagaacaga ttgtttttgc aacgcgtgac      1980
     aacattctgc catgtaatat gctagctgtt ttgtttttag tcattgaagg tagcataaag      2040
     gttgaaacaa gcaacatgat catttcagcg gtcattcagc agtgtaaaac tttaggatat      2100
     ttagttagag agtgtgattt tgctttcttt gcaacatag                             2139
//