ID EF545141; SV 1; linear; genomic RNA; STD; VRL; 3454 BP. XX AC EF545141; XX DT 12-JUL-2008 (Rel. 96, Created) DT 12-JUL-2008 (Rel. 96, Last updated, Version 1) XX DE Beet soil-borne virus isolate XJ segment RNA 2, complete sequence. XX KW . XX OS Beet soil-borne virus OC Viruses; Riboviria; Virgaviridae; Pomovirus. XX RN [1] RP 1-3454 RX DOI; 10.1111/j.1439-0434.2007.01373.x. RX AGRICOLA; IND44079379. RA Wang B., Li M., Han C., Li D., Yu J.; RT "Complete Genome Sequences of Two Chinese Beet soil-borne virus Isolates RT Provide Evidence that the Genome is Highly Conserved"; RL J. Phytopathol. 156(7-8):487-488(2008). XX RN [2] RP 1-3454 RA Han C.; RT ; RL Submitted (10-APR-2007) to the INSDC. RL Plant Pathology, China Agricultural University, No.2 Yuanmingyuan West RL Road, Haidian District, Beijing 100094, China XX DR MD5; 0e1bc470f7dd632bd97091279c1c3f15. DR RFAM; RF00233; Tymo_tRNA-like. DR RFAM; RF01080; UPD-PKib. XX CC GenBank Accession Numbers EF545139, EF545141, and EF545143 CC represent the complete genome of Beet soil-borne virus isolate XJ. XX FH Key Location/Qualifiers FH FT source 1..3454 FT /organism="Beet soil-borne virus" FT /segment="RNA 2" FT /host="sugar beet" FT /isolate="XJ" FT /mol_type="genomic RNA" FT /country="China:Xinjiang" FT /db_xref="taxon:46436" FT 5'UTR 1..382 FT CDS 383..3178 FT /codon_start=1 FT /transl_except=(pos:875..877,aa:OTHER) FT /product="104K protein" FT /note="readthrough protein" FT /db_xref="GOA:B4X9E2" FT /db_xref="InterPro:IPR001337" FT /db_xref="UniProtKB/TrEMBL:B4X9E2" FT /protein_id="ABU63616.1" FT /translation="MVDPRYEGWNQREAIRAKKRRFVSYDTFMDLIVNWREVRVGIIEH FT SATILSQVSRLGEANFYGRNKRFGRVDTNGDVFYVDLSEARIRKILDNIIIALQTTSGE FT GRAKRLGKEASTTAGAEDSALNVAHQLAELAELMTSDQFIEDACFTREKFEHEVGLRWV FT EXQSTAPPVKVDVRAEIDCINNRMKAAARLGLLPGQERHGDAKQTINYDDLDFALNRVA FT GNLLPQTLALERRVESVPETFKDSEDRIDIKGGNPVGETVAKSLVDSHDVKVEKDIGVD FT GDGLAWVLAAIFAFLSMLFFSLMCFGSRRFLRLAIRREGKPGGGTMMFLSRIFTNIRYR FT LRDRAVRLVSRMRYSKRSRYSRSDMRRYLNDYKFSYIPWVADDFMSSDDKKVVADQNAF FT VEAVKPVDEGDTDLVLDAVKRVKEIIQDYLSFTPDFLEIIEMKAAFVVSRKVSNINVPE FT ERDILNLQDKAFDPISCGMPDVQQCSMEEVIKFDLQEVNCGATDDQTSLKSYVDLLRGL FT QYMFSLVGTVKFIAVYMAYSGKQYKCVAEAYASDLEMRKSSVDSATNGTVEKEKSSYVD FT EICLALAILFAMPAFISLIKSGGVVYRYFTHGGGPAARRRLRESLNELDNLEFQNRLNR FT LREGSEDLGERSESSSTIEAFERRLEMLREGDDTGNEGNVAVDEIRSDTAPGTNTLPNA FT SFNVGSAPISGLAVIPCIGFPDSASEQRFARTQGKLLRSVRNDNDFKSRSIPEQQIETV FT FRRDAADTLSNGSSFSSVVLDSDETFSMEKLEVLNKNSYSEVPGEMFTIMKGENVSHAT FT VKLGNEDVVVVNADTDSPTVIAANSLSKLHKDKGIEFGTFNKEKILQISSANIESSDKT FT VSSSKTNNTVRDFTKVLKVIGMAGSRKSSKPGAAKTASSSSSVEVSTSTEAMKTPMRQL FT I" FT CDS 383..877 FT /codon_start=1 FT /product="19K protein" FT /note="coat protein" FT /db_xref="GOA:Q4LCH5" FT /db_xref="InterPro:IPR001337" FT /db_xref="UniProtKB/TrEMBL:Q4LCH5" FT /protein_id="ABU63617.1" FT /translation="MVDPRYEGWNQREAIRAKKRRFVSYDTFMDLIVNWREVRVGIIEH FT SATILSQVSRLGEANFYGRNKRFGRVDTNGDVFYVDLSEARIRKILDNIIIALQTTSGE FT GRAKRLGKEASTTAGAEDSALNVAHQLAELAELMTSDQFIEDACFTREKFEHEVGLRWV FT E" XX SQ Sequence 3454 BP; 970 A; 585 C; 865 G; 1034 T; 0 other; ggtaatttta cttcttcgcc gtttatttaa cacagaagaa gaaaaaattt ccaatttttt 60 gttgcataga taaaacatac ggacaggtat cggtgttttt gaagtgtgac ttaaaatcgg 120 tttttatagt attattggtg tacaggcagg tccgagcact aatatttacc atataaactg 180 tattgcgttg acggaggcgt aagaaaaact atactttcgt ttgattcgct cgatttggcg 240 agtaaaatat aaatcatatc cggtaataat tgatccattt tccagtctac gtacctctat 300 tgaggagcgt gctattggag gtataacgcg tagtgatcaa gcgccgagac gtgttgcaat 360 tcccattacg tcatctatta agatggttga tccgcggtat gaagggtgga accaacgtga 420 ggctataaga gccaagaagc gaaggtttgt atcttacgat acttttatgg atttaatcgt 480 taattggcga gaggtgcggg tcggtattat agagcactcc gctactatac tgtcgcaggt 540 tagtaggtta ggggaagcaa atttttacgg acgaaataag cgcttcggaa gagttgacac 600 taacggtgac gttttttatg ttgatttgag tgaggccagg ataagaaaaa ttttagataa 660 cataattatt gctttacaga ctacttccgg tgaaggacgc gctaaacgat taggaaagga 720 ggcgagcacg acggcaggcg cagaagatag cgctctgaat gtggcacatc aactcgccga 780 gctagccgag cttatgacct ccgatcagtt tattgaagac gcttgcttta cgagagaaaa 840 gtttgagcat gaagttggtt tgcgctgggt tgaatagcaa tcaactgctc cgccggttaa 900 agtggacgta cgtgctgaaa ttgattgcat taacaatcga atgaaagcag cggcgcgttt 960 aggtctacta ccggggcagg agcgacacgg tgacgcgaaa caaactataa attatgatga 1020 tctggatttt gctttgaata gggttgctgg taatttgtta ccgcagactt tggctttgga 1080 gcggcgcgtt gagtccgttc ctgaaacttt taaagattca gaagaccgaa ttgacataaa 1140 aggcggtaat cccgtcggtg agacggtcgc gaaatctctg gttgattctc atgacgttaa 1200 ggtcgaaaag gatataggag tcgacgggga tggtttagcc tgggttttgg cggctatttt 1260 cgcttttctt tctatgttgt ttttctcctt gatgtgtttt gggagtagga ggtttctgcg 1320 tctggcgatt cgacgtgagg gtaaacctgg gggaggtacg atgatgtttc tatcaagaat 1380 ttttacaaac attagatatc gtctgagaga tcgcgctgtg aggcttgtct cgcggatgcg 1440 gtattctaaa cgctcgaggt atagtcgtag cgatatgcga cgttatctta atgattataa 1500 attcagttac ataccttggg ttgctgatga ttttatgagt agcgacgata agaaggttgt 1560 ggcagatcag aatgcttttg tggaggctgt taagcctgtg gacgaaggtg atactgattt 1620 ggtattagat gcagtaaaac gtgttaagga aataatccaa gactatttga gttttactcc 1680 cgactttctt gaaatcattg agatgaaagc ggcctttgtg gtgtcgagga aggttagcaa 1740 tattaacgtt ccggaagagc gcgacatact taatcttcag gataaagctt ttgatcctat 1800 ttcatgcggc atgcctgatg tacaacaatg cagtatggag gaggtgataa agtttgatct 1860 acaggaggtc aattgtggcg ccactgatga tcaaacgtcg ttaaaatcat atgtcgatct 1920 gctaagagga ttgcagtata tgttttcact tgtaggtacg gtgaagttta tagctgtgta 1980 tatggcttat tctgggaaac aatacaagtg tgtggccgaa gcttacgcta gcgatttaga 2040 aatgagaaaa tcgtccgtag actccgccac gaacggtact gttgagaaag aaaaatcttc 2100 ttatgtagat gagatatgtt tagcgttagc aattttattt gcgatgccag ctttcatttc 2160 tttgattaaa tcaggtggtg ttgtttatcg ctattttacc cacggaggag gcccggcagc 2220 gcgtagacgc ttaagggaat ctcttaatga gttggataat ttagagtttc aaaaccgttt 2280 gaatcgtctt cgcgaaggct cggaggattt gggagagcgt tcagagtcat cgtctaccat 2340 agaagctttt gaaagacgtt tggagatgtt gagggaagga gatgatactg ggaatgaagg 2400 caacgttgct gtggatgaaa ttcgtagcga caccgcccct ggtaccaaca ccttgccaaa 2460 cgcatctttt aatgtcggtt cagctcctat tagtggttta gctgttatac cttgcattgg 2520 ttttccggac agtgcgtcgg agcaacgttt tgctcggact caaggcaaac ttttgaggag 2580 tgtaaggaat gataacgatt ttaaaagtcg tagtattcct gaacagcaga tcgagacggt 2640 gtttcgacgg gatgctgcgg acacgttatc taacggctcc agtttttctt ccgtagtttt 2700 agactcggat gaaacattta gcatggaaaa attagaagtt ctaaataaga attcgtatag 2760 tgaagtgcct ggtgaaatgt tcaccattat gaagggtgag aatgtgtctc acgctacggt 2820 taagcttggg aacgaagatg tggttgtggt gaatgctgat acagattctc ccacagttat 2880 agctgcgaat tcgttatcca aacttcataa agataaaggc atcgagttcg gaacttttaa 2940 caaagagaag atattacaaa tttccagtgc taacattgag agttcggata aaacagtgtc 3000 ttcatcaaaa accaataaca cagtacgtga ctttactaaa gttttgaagg ttattggaat 3060 ggctggtagc agaaaatctt ccaaaccggg ggcagcgaaa actgcttctt cttcgtctag 3120 cgttgaagta tctacgtcga cggaagctat gaaaactccc atgagacaat tgatttaaat 3180 tgttcttggg ttttatgatt aattattatt attaatttta aataaaaaat gattatttgg 3240 cgtgatcaac caacgtaggt tatacgataa taaccggtgc ttttatgttc accgaaatcg 3300 aacatacgtt ttatagacct gcagtcgcta ttaagataat taacaaaaac ttaatatttg 3360 acttatgtat gtgagagtag tttctctcgg tcatcatcac acgatgatcc tgtggggtgc 3420 aaatcccccc cttaacttga gggaaatcaa gccc 3454 //