ID EF538876; SV 1; linear; genomic DNA; STD; VRL; 2454 BP. XX AC EF538876; XX DT 23-SEP-2007 (Rel. 93, Created) DT 03-JAN-2018 (Rel. 135, Last updated, Version 2) XX DE Torque teno midi virus 4 isolate 6PoSMA ORF2, ORF1, and ORF3 genes, DE complete cds. XX KW . XX OS Torque teno midi virus 4 OC Viruses; Anelloviridae; Gammatorquevirus. XX RN [1] RP 1-2454 RX DOI; .1099/vir.0.83071-0. RX PUBMED; 17872521. RA Biagini P., Uch R., Belhouchet M., Attoui H., Cantaloube J.F., RA Brisbarre N., de Micco P.; RT "Circular genomes related to anelloviruses identified in human and animal RT samples by using a combined rolling-circle RT amplification/sequence-independent single primer amplification approach"; RL J. Gen. Virol. 88(Pt 10):2696-2701(2007). XX RN [2] RP 1-2454 RA Biagini P., Belhouchet M., de Micco P.; RT ; RL Submitted (05-APR-2007) to the INSDC. RL Service de Virologie Moleculaire, EFS Alpes-Mediterranee, 149, Bd. Baille, RL Marseille 13005, France XX DR MD5; ee349a5ea5922ddfd980d3aba7fe954a. XX FH Key Location/Qualifiers FH FT source 1..2454 FT /organism="Torque teno midi virus 4" FT /host="Homo sapiens" FT /isolate="6PoSMA" FT /mol_type="genomic DNA" FT /country="France" FT /isolation_source="plasma" FT /db_xref="taxon:2065045" FT CDS 200..550 FT /codon_start=1 FT /product="ORF2" FT /db_xref="InterPro:IPR004118" FT /db_xref="UniProtKB/TrEMBL:A8DMP3" FT /protein_id="ABU55877.1" FT /translation="MSTFYKPSVYNGPTKEQMWMSVVTDFHDSFCRCFHSFAHILDLIF FT PDGHRDRDKTIREIIERDLKCHSGGDEEERCGGVLAAAIENTENINQEESQDIADADIR FT ELLAAAESAERR" FT CDS 394..2370 FT /codon_start=1 FT /product="ORF1" FT /db_xref="GOA:A8DMP4" FT /db_xref="InterPro:IPR004219" FT /db_xref="UniProtKB/TrEMBL:A8DMP4" FT /protein_id="ABU55878.1" FT /translation="MPFWWRRRRKVWWGAGRRYRKYRKYKPRRKPRYRRRRYKRAPRRR FT RKRRKKVRRKRKAIPIIQWQPDSIKNCKIKGYNALLLGAEGTQYLCYTNERFTFTPPQY FT AGGGGFAVQTFSLQYLYEEHKFKNNIWTASNIYSDLCRYLRVKMYFYRHPKTDFILNYA FT RQPPFELNKYTYTLAHPYMLLQSKHKKIIPSKLTKPNGKLWKKIIVKPPKQMLSKWFFQ FT KQFAPQSLLQLQAAAASFTYPRLGCCNENRIITVYYLDPQFIQHSTWARTIQSPYKPYD FT SISSQVTFWYPSKGKTEKYTPNYLSETGTEAYYKSINYDTGFFSSKVLTATKVTQNPTS FT ETGYALPPINAARYNPEEDNGEGNSVYLVSVVNGFYDRPTEDNLIYKGAPLWLIFHGFY FT SFISKIKSPSFMSLHMFVIRSPFLKPRPSAITKDFFPIIDLNFTIGNNPYKAYITANQK FT KLWYPTCEHQIETINNFVECGPYIPKFGNDRDSTWELPYHYIFYFKWGGPTTPQQEISD FT PNSKNIYTVPDTLQGTVQVSNPLKQSTESLLHNWDLRRGLITETAFKRMCENIETDTDF FT LPDSQETPAKRPRLAGELLHPRRKKTKKSRHVSRISSKKIPSKKHHRHKKESSTSSSSS FT ESSTPLTSQATPPPPSWVRQGGG" FT CDS 1853..2389 FT /codon_start=1 FT /product="ORF3" FT /db_xref="InterPro:IPR008474" FT /db_xref="UniProtKB/TrEMBL:A8DMP5" FT /protein_id="ABU55879.1" FT /translation="MTEIVLGNYLITIFSILSGEDQQHHNKKLATPTPKTSTLFPILSK FT EQYKYPTHSNKALKAYSTTGILEEGSLQKQLLKECAKTSKLIQISSQIRKRHQQKDQDW FT QENSYTPEEKKQRNQDMSPGSLQRRYLPRNTTDTRRNHPPHPAAARAAPPLRHRPRPRR FT HLGCGRAGAKMAGPN" XX SQ Sequence 2454 BP; 889 A; 542 C; 446 G; 577 T; 0 other; atataagtaa gtggggtggc gaatggctga gtttaccccg ctagacggtg cagggaccgg 60 atcgagcgca gcgaggaggt ccccggctgc ccatgggcgg gagcccgagg tgagtgaaac 120 caccgaggtc taggggcaat tcgggctagg gcagtctagc ggaacgggca agaaacttaa 180 aaatgctttt tgtttttaga tgtcaacctt ctacaaacca agtgtttaca atggacccac 240 aaaagaacaa atgtggatgt ctgtagtaac tgattttcat gacagtttct gcagatgctt 300 tcacagtttt gctcatatcc ttgaccttat cttcccagac ggtcacagag atagagacaa 360 aactataaga gaaattatag agagagattt aaaatgccat tctggtggag acgaagaaga 420 aaggtgtggt ggggtgctgg ccgccgctat agaaaataca gaaaatataa accaagaaga 480 aagccaagat atcgccgacg cagatataag agagctcctc gccgccgcag aaagcgcaga 540 aagaaggtaa gaagaaaaag aaaagccata cctataattc agtggcagcc agacagcatt 600 aaaaactgta aaattaaagg atacaatgcc ttactactag gagctgaagg gactcaatac 660 ttatgctata ccaatgagag atttacattc acacctccac aatatgctgg aggtggagga 720 tttgcagttc aaaccttctc tcttcaatac ttatatgaag aacataaatt taaaaataat 780 atttggactg cctcaaacat atactcagac ttatgcagat atttaagagt taaaatgtat 840 ttttataggc atcctaaaac agacttcata cttaactatg caagacagcc accttttgaa 900 ctaaataaat acacatacac actagctcat ccatacatgc tactacaaag caagcacaaa 960 aaaataatac ccagcaaatt aactaaacct aatggaaagc tttggaaaaa aattatagtt 1020 aaaccaccta aacaaatgct cagtaaatgg ttttttcaaa aacaatttgc acctcaaagt 1080 ttactgcaac tacaagcagc agcagctagc tttacttatc ccagattagg ctgctgtaat 1140 gaaaacagaa taattacagt ctattattta gacccacagt tcatccagca ttccacctgg 1200 gctagaacta tacaatctcc atacaaacca tatgacagta tatcaagtca agtaactttt 1260 tggtacccca gtaaaggcaa aacagaaaaa tatacaccca actacctatc agaaacaggc 1320 actgaagcct actacaaaag tataaactat gatacaggtt ttttttcctc aaaagtacta 1380 acagctacaa aggtaacaca aaaccctact tcagaaacag ggtatgcact tccaccaata 1440 aatgcagcca gatacaatcc tgaagaggac aatggtgaag gcaactctgt atacttagta 1500 tcagtagtga atggtttcta tgacaggccc acagaagaca atttaatata caaaggagct 1560 cctctttggt taatttttca tggcttttat agttttattt caaaaattaa gagtccttca 1620 ttcatgtcac ttcacatgtt tgtaataaga agcccatttt taaagcctag accatcagca 1680 ataactaaag actttttccc aattatagac ctaaacttta ccataggtaa taatccatat 1740 aaggcttata ttactgccaa tcaaaagaaa ctgtggtacc ctacctgtga acaccaaata 1800 gaaacaatta ataactttgt tgaatgtggc ccatacatac ctaaatttgg aaatgacaga 1860 gatagtactt gggaactacc ttatcactat attttctatt ttaagtgggg aggaccaaca 1920 acaccacaac aagaaattag cgaccccaac tccaaaaaca tctacactgt tcccgatact 1980 ctccaaggaa cagtacaagt atccaaccca ctcaaacaaa gcactgaaag cttactccac 2040 aactgggatc ttagaagagg gctcattaca gaaacagctt ttaaaagaat gtgcgaaaac 2100 atcgaaactg atacagattt cctcccagat tcgcaagaga caccagcaaa aagaccaaga 2160 ctggcaggag aactcctaca cccccgaaga aaaaaaacaa agaaatcaag acatgtctcc 2220 aggatctctt caaagaagat accttccaag aaacaccaca gacacaagaa ggaatcatcc 2280 acctcatcca gcagcagcga gagcagcacc ccccttacgt cacaggccac gcccccgccg 2340 ccatcttggg tgcggcaggg cgggggctaa aatggcggga cccaattaaa ttgtactttc 2400 actttccaat taaaaactgc cacgtcacac taaaggggtg gagactttaa aact 2454 //