ID   EF538684; SV 1; linear; genomic RNA; STD; VRL; 2157 BP.
XX
AC   EF538684;
XX
DT   08-MAY-2007 (Rel. 91, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 2)
XX
DE   Rice stripe virus isolate SD-JN2 segment RNA4, complete sequence.
XX
KW   .
XX
OS   Tenuivirus oryzaclavatae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus.
XX
RN   [1]
RP   1-2157
RA   Zhu C., Ma J., Wen F.;
RT   "Complete nucleotide sequence of RNA4 of rice stripe virus ambisense coding
RT   strategy";
RL   Unpublished.
XX
RN   [2]
RP   1-2157
RA   Zhu C., Ma J., Wen F.;
RT   ;
RL   Submitted (05-APR-2007) to the INSDC.
RL   College of Life Science, Shangdong Agricultural University, Daizong Street
RL   No.61, Taian, Shandong 271018, China
XX
DR   MD5; 3ebda32c65ff65e5bd81631920006eaa.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2157
FT                   /organism="Tenuivirus oryzaclavatae"
FT                   /segment="RNA4"
FT                   /host="rice"
FT                   /isolate="SD-JN2"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:3052763"
FT   gene            55..591
FT                   /gene="SP"
FT   CDS             55..591
FT                   /codon_start=1
FT                   /gene="SP"
FT                   /product="disease-specific protein"
FT                   /db_xref="InterPro:IPR006960"
FT                   /db_xref="UniProtKB/TrEMBL:A5HLX3"
FT                   /protein_id="ABQ09286.1"
FT                   /translation="MQDVQRTIEVSVGPIVGLDYTLLYDTLPETVSDNFTLPDLKDPER
FT                   VTEDTKKLILKGCVYIAYHHPLETDTLFIKVHKHIPEFCHSFLSHLLGGEDDDNALIDI
FT                   GLFFNMLQPSLGGWITKNFLRHPNRMSKDQIKMLLDQIIKMAKAESSDSEEYEKVWKKM
FT                   PTYFESIIQPLLHKT"
FT   gene            complement(1246..2106)
FT                   /gene="NSvc4"
FT   CDS             complement(1246..2106)
FT                   /codon_start=1
FT                   /gene="NSvc4"
FT                   /product="putative movement protein"
FT                   /db_xref="GOA:Q52R50"
FT                   /db_xref="InterPro:IPR004980"
FT                   /db_xref="UniProtKB/TrEMBL:Q52R50"
FT                   /protein_id="ABQ09287.1"
FT                   /translation="MALSRLLSTSKSKVLYDDLSEESQKRVDNKNRKSLALSKRPLNQG
FT                   RVTIDQAATMLGLEPFSFSDVKVNKYDMFIAKQDYSVKAHRKATFNILVDPYWFHQPLT
FT                   HYPFFRVATFAMVWIGIKGRASGITTLRIIDKSYVNPSDQIEVEVRYPISKNFAVLGSL
FT                   ANFLALEDKHNLQVSVSVDDSSVQNCVISRTLWFWGVERTDLPVSMKTSDTVMFEFEPL
FT                   EDKAINHLSSFSNFTTNVVQKAVGGAFTSKSFPELDTEKEFGVVKQPKKIPITKKSKSE
FT                   VSVIM"
XX
SQ   Sequence 2157 BP; 692 A; 443 C; 401 G; 621 T; 0 other;
     acacaaagtc cagggcattt gtacaacgat ccagcaattt aatcagaatc gaagatgcaa        60
     gacgtacaaa ggactataga agtttctgtt ggtcctattg taggcctaga ttacactcta       120
     ttgtatgaca ctctgcccga gactgttagc gataacttta ctctacctga tttgaaagat       180
     ccagagagag tcacggaaga tactaagaag ctaatactca aaggctgtgt ttacatagca       240
     tatcatcacc ccttagagac tgacaccctt ttcatcaaag ttcacaaaca tataccagag       300
     ttttgtcact cattcctatc acacctttta ggaggtgaag atgatgacaa tgctcttata       360
     gacattggtc tgtttttcaa catgttgcaa ccctctttgg gcggttggat aaccaagaat       420
     tttcttagac accctaatag gatgtctaaa gatcaaatta aaatgctcct ggatcaaatt       480
     atcaagatgg ctaaggctga gagctcggac tcagaagagt atgaaaaagt gtggaagaag       540
     atgccgactt attttgaatc aattatacaa cctcttctac acaaaacata gtttattgca       600
     tatcacattt tccacccacg agtgcttgca ttctagaagt ggagccagtt tgggttggcc       660
     ttcttgtatt aaaatacaag tatattatag tctaaacaat atacatgatg tttgttcact       720
     taagcttgac agcttgtaag taattgtgag tgattgtgcg tgtgtatata tatgtcaata       780
     tatgactgtg cacaggtgtg tagatgtgaa cactagaaac aaataaataa atatatacct       840
     atcaactcat atacatactt gtgagtcttg gctcctctat aaacacacat aaaaccatga       900
     gagtatcata caagacccat tgcaaagata ccaataactt tgtttttaca atgtcaaaac       960
     taaaaactga aataccaaaa acatgagaaa atagaaaatc gaaaacaatg aatggtgcta      1020
     agcaccacat ccggatgtgg tgcgtagcac cattttcata acattaatct ataacctact      1080
     agtagcaaaa acacccatat gcatgaagtg catagcactc tcttatggat tgactactat      1140
     gattacgtaa ttgcatagca tcctattgaa aaaaagcaga gcaaaacaga ccatatcaaa      1200
     tgcgtagcac cagatgttgg catactccgg aactggttat ctcacctaca tgatgacaga      1260
     aacctcagat tttgatttct ttgtgatggg tatctttttt ggctgcttca ccacaccgaa      1320
     ctctttctca gtgtctagct cagggaagct cttgctggtg aaagcacctc ctactgcttt      1380
     ctgaacaaca ttagtcgtga aattactgaa gctggacaaa tggtttatag ccttatcttc      1440
     tagtggttca aattcaaaca tcacagtgtc actggtcttc atggacactg gcagatcagt      1500
     cctttcaacc ccccagaacc aaagagttct agagatgaca cagttctgca ctgagctatc      1560
     atcaacagat acggacactt gaagattatg cttatcctcc aaagccagaa aattcgctag      1620
     agaacccaag acagcaaaat tcttgctaat tgggtagcga acctctacct caatttgatc      1680
     tgaggggttc acataggact tgtctattat gcggagggta gttattccac tagctctacc      1740
     cttaattcca atccagacca tagcaaaagt tgccactcta aagaatgggt aatgggtgag      1800
     aggttgatga aaccaatatg gatcaacaag tatgttgaaa gttgctttcc tatgggcctt      1860
     cacagaatag tcctgtttgg ctatgaacat atcatacttg ttcaccttga catctgagaa      1920
     gctgaagggt tccaatccaa gcattgtggc agcctggtca atcgtaaccc taccctggtt      1980
     cagaggcctc ttggagagag ctagagattt cctattctta ttatcaactc tcttttggga      2040
     ctcctcacta aggtcatcat agagtacctt actttttgaa gtggacaaaa gtcgagacaa      2100
     agccataatt aaagtatata ttagcttaat ctcaaaagat atgccatgac tttgtgt         2157
//