ID   EF532620; SV 1; circular; genomic DNA; STD; VRL; 2637 BP.
XX
AC   EF532620;
XX
DT   09-MAY-2007 (Rel. 91, Created)
DT   09-MAY-2008 (Rel. 95, Last updated, Version 2)
XX
DE   Squash leaf curl virus segment DNA-A, complete sequence.
XX
KW   .
XX
OS   Squash leaf curl virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2637
RX   DOI; 10.1111/j.1439-0434.2007.01389.x.
RX   AGRICOLA; IND44042482.
RA   Al-Musa A., Anfoka G., Misbeh S., Abhary M., Ahmad F.H.;
RT   "Detection and Molecular Characterization of Squash leaf curl virus (SLCV)
RT   in Jordan";
RL   J. Phytopathol. 156(5):311-316(2008).
XX
RN   [2]
RP   1-2637
RA   Al-Musa A., Anfoka G., Misbeh S., Abhary M., Haj Ahmad F.;
RT   ;
RL   Submitted (01-APR-2007) to the INSDC.
RL   Department of Plant Protection, Faculty of Agriculture, University of
RL   Jordan, Amman, Jordan
XX
DR   MD5; e02f4d3bc846a1738ca3faddbfb487e8.
DR   EuropePMC; PMC4201715; 25300752.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2637
FT                   /organism="Squash leaf curl virus"
FT                   /segment="DNA-A"
FT                   /mol_type="genomic DNA"
FT                   /country="Jordan"
FT                   /isolation_source="Malva parviflora"
FT                   /db_xref="taxon:10829"
FT   CDS             212..967
FT                   /codon_start=1
FT                   /product="AV1"
FT                   /db_xref="GOA:A5HJ03"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:A5HJ03"
FT                   /protein_id="ABQ14474.1"
FT                   /translation="MVKRDAPWRLMAGTPKVSRSANFSPRGGMGPKFKKAAAWVNRPMY
FT                   RKPRIYRTMRGPDIPKGCEGPCKVQSYEQRHDISHLGKVMCISDVTRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDENILLKNHTNSVMFWLVRDRRPYGIPMDFGQVFNMFDNEPSTATI
FT                   KNDLRDRYQVMHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAANYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSITN"
FT   CDS             complement(964..1368)
FT                   /codon_start=1
FT                   /product="AC3"
FT                   /db_xref="GOA:A5HJ04"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:A5HJ04"
FT                   /protein_id="ABQ14475.1"
FT                   /translation="MVMDLRTWDDITVHQAENSVFIWEVPIPLYFKMYNVEDPLYTHTR
FT                   IYHIQIRFNHNLRRALNLHKAFLNFQVLTESIRASGTTYLNRFRHLVMLYLDRLGVIGL
FT                   NNVIRAVSWATDRSYVNYVLESHEIKFKIY"
FT   CDS             complement(1109..1504)
FT                   /codon_start=1
FT                   /product="AC2"
FT                   /db_xref="GOA:A5HJ00"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:A5HJ00"
FT                   /protein_id="ABQ14476.1"
FT                   /translation="MPNSSSSKVPSIKAQHRIAKKRAVRRRRIDLDCGCSIYIHINCAK
FT                   DGNGFTHMGRHHCASGREFRFYLGGSNSPLFQDVQRGGSTLHAHKDIPHSNPVQPQPEE
FT                   STKSSQSVPELPSLDGIDSSFWDDIFE"
FT   CDS             complement(1446..2492)
FT                   /codon_start=1
FT                   /product="AC1"
FT                   /db_xref="GOA:A5HJ01"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:A5HJ01"
FT                   /protein_id="ABQ14477.1"
FT                   /translation="MPRNPNSFRLTARNIFLTYPRCDVPKEEVLGELRILSVVSGKPNY
FT                   VRVAREEHSDGAPALTRLKQLSGKSNNKELGIFPTNTQRRSARFHPKIRAPKETNAGKN
FT                   YITKEGDYWQSGQYKVSGGSKSNRDDVYHNAVNAGSAGEALDIIKAGDPKTFIVNYHNL
FT                   LANVERLFQKPPDPWVPPFEISSFTSVPEELQDWADDYFNECSAARPRPTSIIIEGGSR
FT                   TGKTMWARSLGPHNYLSGHLDFNSRVFSNDVKYNVIDDVAPHYLKLKHWKELIGAQRDW
FT                   QSNCKYGKPVQIKGGIPSIVVCNPGEGSSYKDFLDKAENSALREWTEKNAKFIFLEGPL
FT                   YQSTAQDC"
FT   CDS             complement(2048..2425)
FT                   /codon_start=1
FT                   /product="AC4"
FT                   /db_xref="UniProtKB/TrEMBL:A5HJ02"
FT                   /protein_id="ABQ14478.1"
FT                   /translation="MFPKKKCLGSFASSRWSAANRITLESPERNIPTGLPHLHASSNYR
FT                   ENPTTRSWEFFQPTPRGGLPDFTRKSGRQKKPTPARTTSPKKVIIGNPGNIKCLGVQSR
FT                   TETTYITMPLMQVVREKLSTL"
XX
SQ   Sequence 2637 BP; 684 A; 602 C; 591 G; 760 T; 0 other;
     accggatggc cgcccgtttt tggtgtcctc tactttagcc cacggggcag gcccaggccc        60
     aattcaacca caaccttttt ttattttatg ggaccacatg aattattgca accaaccacg       120
     ttgcgcctga cgagtctaca taataatgac ttggtgacta agtgtggtcc ctataaaaaa       180
     gctgacatat cccatacctc tttaattcaa aatggttaag agagatgccc catggcgttt       240
     aatggcgggg accccaaagg tctcacgctc tgctaacttt tcgcctcgtg gaggtatggg       300
     cccaaaattc aagaaggccg ctgcatgggt taacaggccc atgtacagga agcccaggat       360
     ctatcgcaca atgagaggcc cagacatccc caagggatgt gaagggccat gcaaggttca       420
     gtcttacgag cagcggcatg atatctccca tcttggcaag gtaatgtgta tttcggacgt       480
     gacgcgtggt aatggcatta ctcaccgcgt cggcaagcgc ttttgtgtta agtctgtata       540
     tattttaggc aagatatgga tggacgaaaa tatcttgttg aagaatcaca cgaacagtgt       600
     gatgttttgg ttagttcgag atcgtagacc atatggcatt ccgatggatt tcggccaggt       660
     gttcaacatg tttgacaacg agcccagcac ggcaactatc aagaacgatc tacgtgatcg       720
     ttatcaagtc atgcacaggt tctacgcgaa ggtcactggt ggtcagtatg ctagcaacga       780
     acaagccttg gttaggcgct tctggaaggt caacaaccat gttgtgtata atcaccagga       840
     agccgcgaat tacgagaatc atacggagaa cgctttgtta ttgtatatgg catgtactca       900
     tgcctctaac cctgtatatg cgacattgaa aattcggatc tatttttatg attcgataac       960
     aaattaataa attttgaatt ttatttcatg actctcgagt acataattta catatgaacg      1020
     gtctgttgcc caagatacag ctcgtataac gttattgaga ccaataactc ctaacctatc      1080
     taagtacaac ataactaagt gcctaaatct attcaaatat gtcgtcccag aagctcgaat      1140
     cgattccgtc aagacttgga agttcaggaa cgctttgtga agatttagtg ctctcctcag      1200
     gttgtggttg aaccggattt gaatgtggta tatccttgtg tgcgtgtaga gtggatcctc      1260
     cacgttgtac atcttgaaat agaggggaat tggaacctcc caaataaaaa cggaattctc      1320
     tgcctgatgc acagtgatgt cgtcccatgt gcgtaaatcc attaccatct ttggcgcagt      1380
     ttatatgtat gtatatggaa cagccacagt ctaagtcgat tcttcgacga cgaacagctc      1440
     tttttttagc aatcctgtgc tgtgctttga tagaggggac cttcgaggaa gatgaatttg      1500
     gcattttttt cagtccactc tcttagtgcc gagttctcgg ctttgtcgag gaaatcttta      1560
     taactggacc cctctccagg attgcacacc acgattgatg ggattccacc tttaatttga      1620
     accggctttc catatttaca gttggactgc cagtcccttt gggccccaat caattccttc      1680
     cagtgcttta gctttaggta atgcggagcg acgtcatcaa tgacgttata cttgacgtca      1740
     tttgagaaaa ccctagaatt gaaatcaaga tggccgctca agtaattatg tgggcctaac      1800
     gacctagccc acattgtctt gcccgttctt gaaccacctt ctatgattat actagttggc      1860
     cttggccgcg cagctgaaca ctcattaaaa taatcatcag cccaatcttg taactcttct      1920
     ggaactgacg tgaacgaaga gatctcaaac ggaggaaccc atggatccgg aggtttctga      1980
     aataatctct cgacgttagc taataaattg tgataattaa cgataaacgt ctttggatca      2040
     ccagctttta taatgtcgag agcttctccc gcactacctg cattaacggc attgtgatat      2100
     acgtcgtctc tgttcgactt tgaaccccca gacactttat attgcccgga ttgccaataa      2160
     tcaccttctt tggtgatgta gttcttgccg gcgttggttt cttttggcgc cctgattttc      2220
     gggtgaaatc gggcagaccg cctctgggtg ttggttggaa aaattcccag ctccttgttg      2280
     ttggattttc ccgataattg cttgaggcgt gtaagtgcgg gagccccgtc ggaatgttcc      2340
     tctctggcga ctctaacgta attcggtttg ccgctgacca ccgagaggat gcgaagctcc      2400
     ccaagcactt cttctttggg aacatcgcac cttggataag ttaagaatat atttctggca      2460
     gttaaacgaa aggaattagg gtttcgtggc atatttcgta aatatgcgtc gggacaccag      2520
     gaggtgtcct ctcaactttc tcatattgcc cctgtccttt tgtcctatat atacctcaag      2580
     acacataaag cctctagggg acaccaaggg gcaaaatcgg ccatccgcaa taatatt         2637
//