ID   EF501978; SV 1; linear; genomic DNA; STD; VRL; 1731 BP.
XX
AC   EF501978;
XX
DT   08-MAY-2007 (Rel. 91, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Tomato golden mottle virus isolate Rioverde SLP3 segment A replication
DE   initiator protein (c1) and coat protein (v1) genes, partial cds.
XX
KW   .
XX
OS   Tomato golden mottle virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1731
RX   DOI; 10.1094/PDIS-91-11-1513B.
RX   AGRICOLA; IND44034847.
RA   Mauricio-Castillo J.A., Arguello-Astorga G.R., Ambriz-Granados S.,
RA   Alpuche-Solis A.G., Monreal-Vargas C.T.;
RT   "First Report of Tomato golden mottle virus on Lycopersicon esculentum and
RT   Solanum rostratum in Mexico";
RL   Plant Dis. 91(11):1513-1513(2007).
XX
RN   [2]
RP   1-1731
RA   Mauricio-Castillo J.A., Arguello-Astorga G.R., Gregorio-Jorge J.,
RA   Ambriz-Granados S., Alpuche-Solis A.G., Monreal-Vargas C.T.;
RT   "First report of Tomato golden mottle virus in Mexico";
RL   Unpublished.
XX
RN   [3]
RP   1-1731
RA   Mauricio-Castillo J.A., Arguello-Astorga G.R., Gregorio-Jorge J.,
RA   Ambriz-Granados S., Alpuche-Solis A.G., Monreal-Vargas C.T.;
RT   ;
RL   Submitted (18-MAR-2007) to the INSDC.
RL   Molecular Biology, Instituto Potosino de Investigacion Cientifica y
RL   Tecnologica, A.C., Camino a la presa San Jose 2055, San Luis Potosi, SLP
RL   78231, Mexico
XX
DR   MD5; a734df6946b53559fd07e92a4bdd52b2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1731
FT                   /organism="Tomato golden mottle virus"
FT                   /segment="A"
FT                   /host="Solanum rostratum"
FT                   /isolate="Rioverde SLP3"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico"
FT                   /collection_date="2005"
FT                   /db_xref="taxon:223342"
FT   gene            complement(<1..694)
FT                   /gene="c1"
FT   CDS             complement(<1..694)
FT                   /codon_start=1
FT                   /gene="c1"
FT                   /product="replication initiator protein"
FT                   /note="rolling-circle replication initiation protein; Rep;
FT                   C1; L1"
FT                   /db_xref="GOA:A5HDX7"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:A5HDX7"
FT                   /protein_id="ABQ12766.1"
FT                   /translation="MPLPRRFRLQAKNIFLTYPLCSLTKDEALEQLQSIQLTSNKRYIK
FT                   ICRELHENGEPHLHALVQLEGKVQITNERQFDLVSPTRSAHFHPNIQGAKSSSDVKSYI
FT                   DKDGDTLEWGEFQIDGRSARGGQQTANDSYAKALNATGVQQALQTLKEEQPRDFVKDFH
FT                   NLKGNLEKIFAKAPEPWVPPFSLSSFNNVPEELQSWADDYFGNGSAARTLRPISIIIEG
FT                   DSRTGKTMW"
FT   gene            1027..>1731
FT                   /gene="v1"
FT   CDS             1027..>1731
FT                   /codon_start=1
FT                   /gene="v1"
FT                   /product="coat protein"
FT                   /note="capsid protein; CP; AV1; AR1"
FT                   /db_xref="GOA:A5HDX8"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:A5HDX8"
FT                   /protein_id="ABQ12767.1"
FT                   /translation="MPKRDAPWRLMGGTSKVSRSSNQSPRTGTGPKFDKAHAWVNRPMY
FT                   RKPRIYRAWRTPDVPRGCEGPCKVQSFEQRHDISHVGKVMCISDVTRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDDNIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV
FT                   KNDLRDRYQVVHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPI"
XX
SQ   Sequence 1731 BP; 451 A; 362 C; 413 G; 505 T; 0 other;
     cccacattgt ctttcccgtt cttgaatcac cttcgatgat gatactgata ggtcttaatg        60
     tccgcgcagc ggaaccattt ccaaaataat catcagccca tgactgtaac tcctccggca       120
     cgttgttaaa tgaggagagt gaaaatggag gaacccatgg ttctggagcc tttgcaaata       180
     tcttctcaag gttacccttg agattgtgaa aatctttaac aaaatcccta ggttgttctt       240
     cctttaaagt ttggagtgcc tgttgcactc cagttgcgtt aagcgccttg gcatatgagt       300
     cgtttgcagt ctgctgacct cctctagcag atctgccatc gatttgaaat tctccccatt       360
     cgagggtatc tccatctttg tcgatatatg atttgacatc ggaactagat ttagctccct       420
     gaatgttcgg atggaaatgt gctgacctgg ttggggatac cagatcgaac tgtcgttcat       480
     tcgtgatctg gacttttcct tcaagttgga caagggcatg gagatgaggt tccccattct       540
     cgtgaagctc tctgcaaatc ttgatatatc gtttattcga agttagttgt attgattgta       600
     actgctctaa tgcttcatct ttagtaagag agcataatgg gtatgttagg aatatatttt       660
     ttgcttgaag tctgaaacgt ctgggtagtg gcatatttgt aattaaaggg tgtactccaa       720
     ttgagctcct ctcaaacttg gtgaaacaat tggagtattg gagtacaatt tatactaaaa       780
     cctcagatag cgcttggaga cacgtggcgg ccatccgttt ataatattac cggatggccg       840
     cgcgattttt tacccgaccg ggcccattac tgaaatattc tcgggtcatg caataatgat       900
     aaatatgact gtccaatcac atgacgtctg ctgggtctaa ttagtggtcc ttggtagaca       960
     agaatggacc cgggatatct ataaatatta aagtgaatcc ccactattgt atatctttaa      1020
     tttgaaatgc caaagcgcga tgctccgtgg cgattgatgg gggggacctc aaaggtgagc      1080
     cggtcctcca accagtctcc caggactggt actgggccta aatttgacaa ggcccatgcc      1140
     tgggttaaca ggcctatgta caggaagccc aggatatatc gggcttggag aacacccgac      1200
     gttcctagag gctgtgaagg cccatgtaag gtccagtcat ttgaacagcg tcatgatatc      1260
     tcccatgttg gtaaggtgat gtgcatatcg gacgtcaccc gtggcaacgg tatcactcat      1320
     cgcgttggta agcgtttttg tgttaagtcc gtgtatatat taggcaagat ctggatggat      1380
     gacaacatca agttgaagaa ccacacgaac agtgtcatgt tctggttggt cagggatagg      1440
     agaccatatg gtactcctat ggattttggc caagtgttca acatgtacga caatgagcct      1500
     agtactgcta ctgtgaagaa tgatcttcgt gatcgttatc aggtagtcca cagattttat      1560
     gctaaggtca ctggtggtca gtatgccagc aatgagcagg ctcttgtcag acgattctgg      1620
     aaggtgaaca accatgtggt gtacaaccat caggaagccg ggaagtatga gaaccacaca      1680
     gaaaatgctc tgttattgta catggcatgt acacatgctt ctaatccaat c               1731
//