Dbfetch
ID EF495173; SV 1; linear; genomic RNA; STD; VRL; 1609 BP. XX AC EF495173; XX DT 20-APR-2007 (Rel. 91, Created) DT 20-APR-2007 (Rel. 91, Last updated, Version 1) XX DE Prunus necrotic ringspot virus isolate RW3 movement protein gene, complete DE cds; and coat protein gene, partial cds. XX KW . XX OS Prunus necrotic ringspot virus OC Viruses; Riboviria; Bromoviridae; Ilarvirus. XX RN [1] RP 1-1609 RA Cook M.A., Allison R.F.; RT "Characterization of Prunus necrotic ringspot virus isolates in Michigan"; RL Unpublished. XX RN [2] RP 1-1609 RA Cook M.A., Allison R.F.; RT ; RL Submitted (16-MAR-2007) to the INSDC. RL Plant Biology, Michigan State University, 166 Plant Biology Building, East RL Lansing, MI 48824, USA XX DR MD5; 74655c6b25fc2e5867a661c83410d1e9. XX FH Key Location/Qualifiers FH FT source 1..1609 FT /organism="Prunus necrotic ringspot virus" FT /host="sour cherry, Montmorency" FT /isolate="RW3" FT /mol_type="genomic RNA" FT /country="USA" FT /isolation_source="leaves" FT /db_xref="taxon:37733" FT CDS 42..893 FT /codon_start=1 FT /product="movement protein" FT /note="cell to cell movement" FT /db_xref="GOA:A4ZYA0" FT /db_xref="InterPro:IPR002538" FT /db_xref="UniProtKB/TrEMBL:A4ZYA0" FT /protein_id="ABP38052.1" FT /translation="MAGVSKNPSTSDFSVVECSMDEMSQISEDLHKLMLSDEMRALPTK FT GCHILHLVNLPKSNILRLASKEQKGFLSRQADKVKKKVYRCVGRVFLVYVPIIQATTSG FT LITLKLQNSDTGEISDVVTDVEANRAFVIMDRWGRSLVESADLNLLYSISCPDVRPGAR FT VGEMMAFWDERMSRQQTYLEKGNPILFPIAETKPSKYLNDKKVLMSMVRSRILAGTEGC FT DIAPENIEVKRLGDNRKVLTIQPKAPIVEEVKNDVEPLGSNGENHMEEKTVTVKVGSSG FT SA" FT CDS 969..>1609 FT /codon_start=1 FT /product="coat protein" FT /note="capsid protein" FT /db_xref="GOA:A4ZYA1" FT /db_xref="InterPro:IPR002681" FT /db_xref="UniProtKB/TrEMBL:A4ZYA1" FT /protein_id="ABP38053.1" FT /translation="MVCRICNHTHAGGCRSCKKCHPNDALVPLRAQQRAANNPNRNRNP FT NRVSSGIGPAIRPQPVVKTTWTVRGPNVPPRIPKGYVAHNHREVTTTEAVKYLSIDFTT FT TLPQLMGQNLTLLTVIVRMNSMSSNGWIGMVEDYKVNQPDGPNALSRKGFLKDQPRGWQ FT FEPPSDLDFDTFARTHRVVIEFKTEVPAGAKVLVRDLYVVVSDLPRVQIPT" XX SQ Sequence 1609 BP; 435 A; 328 C; 430 G; 416 T; 0 other; tctattcgta attccacttg ttggttgaat agtgtttcag tatggccggt gtcagtaaaa 60 acccctccac tagtgatttt tcagtagtgg agtgttctat ggacgaaatg agccagatat 120 cagaggattt gcataaactt atgctgtccg atgagatgag ggcgttacca acgaaaggtt 180 gtcatatcct gcatttagtt aacctcccga aatccaatat attgagatta gcgagtaagg 240 agcagaaagg tttcctctcg cgacaggccg ataaagtaaa gaagaaagtt tacagatgtg 300 taggccgagt attcctcgtt tatgtaccga tcattcaggc aacgacttcg gggctgataa 360 cccttaagtt gcaaaactcc gatacaggag agatttcaga cgtcgtgaca gacgtcgaag 420 ccaaccgcgc ctttgttatt atggacagat ggggaagatc cctggtggaa tcagcagatt 480 taaatctgtt gtattccatt tcatgtccgg acgtccgacc tggagccaga gtgggagaga 540 tgatggcttt ttgggacgag aggatgtcaa ggcagcagac ttacttggag aaagggaatc 600 ctattttatt cccgattgcc gagacaaaac cttcgaaata tcttaacgat aagaaggtgt 660 tgatgtctat ggtccgaagt aggatattgg caggtacaga agggtgcgat atagctcccg 720 agaatataga agtcaaacga ttaggggata ataggaaggt tttgactatt caaccgaaag 780 ccccgatcgt agaggaagtt aagaacgatg ttgaaccgtt aggttcgaat ggtgaaaatc 840 atatggaaga gaagactgtg accgttaagg tcggtagttc tggaagtgct tgagtgacta 900 tgtcacgagc gtgcgctttg cgcgagcgtt tttctttcct ttcttccaaa catcaatttc 960 atctgataat ggtttgccga atttgcaatc atacccacgc tggtggatgc cgttcttgca 1020 agaagtgcca tccgaatgat gctctggtcc cactcagggc tcaacaaagg gctgcgaata 1080 acccgaatag gaataggaac ccgaataggg tttcgagcgg tataggacct gcgatccgac 1140 cgcaaccggt cgtgaagacc acttggaccg tgaggggtcc gaatgtgcct ccccgaattc 1200 ccaagggtta tgtagcacat aatcaccgag aggtgacgac gacagaggca gtgaagtact 1260 tgagcattga cttcacgacc actctccctc agttgatggg tcagaatttg accttattaa 1320 ctgtcatagt ccgaatgaac tctatgagtt cgaatggttg gattgggatg gtggaggact 1380 ataaggtgaa tcaacctgat ggtccgaatg ccctgtctag gaaggggttc ttgaaggacc 1440 aaccgagagg ttggcagttc gaacctccct ccgatttaga tttcgacact tttgcgcgta 1500 cgcatcgtgt cgtcatcgaa ttcaagaccg aagtgcccgc tggggccaag gtcttggtta 1560 gggatttgta cgtagtggta agtgacttac cacgagtgca gattccgac 1609 //