ID   EF490558; SV 1; linear; genomic RNA; STD; VRL; 1126 BP.
XX
AC   EF490558;
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DT   01-DEC-2010 (Rel. 107, Created)
DT   02-DEC-2010 (Rel. 107, Last updated, Version 2)
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DE   Turnip mosaic virus isolate WFSG1-06 polyprotein gene, partial cds.
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KW   .
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OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-1126
RA   Liu J., Gao R., Wang H., Zhu X., Yu X., Li X.;
RT   "3'- terminal genomic sequence of Turnip mosaic virus";
RL   Unpublished.
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RN   [2]
RP   1-1126
RA   Liu J., Gao R., Wang H., Zhu X., Yu X., Li X.;
RT   ;
RL   Submitted (13-MAR-2007) to the INSDC.
RL   Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL   Daizong Street, Tai'an, Shandong 271018, China
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DR   MD5; 046ef87f539c468f4ca1cd569ae84865.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1126
FT                   /organism="Turnip mosaic virus"
FT                   /host="radish"
FT                   /isolate="WFSG1-06"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..915
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains NIb and CP"
FT                   /db_xref="GOA:E4VP90"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:E4VP90"
FT                   /protein_id="ABS20032.1"
FT                   /translation="NFEDYEDGAEVCVYHQAGETLDAGLTEEQKQAEKERKERERSEKE
FT                   RERQKQLALKKGKNAAQEEGERDNEVNAGTSGTFSVPRLKSLTSKMRVPKFEKRVALNL
FT                   DHLILYTPEQTDLSNTRSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSP
FT                   NINGMWVMMDGDDQVEFPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYG
FT                   LQRNLTDMSLARYAFDFYEMISRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVE
FT                   NTERHTTEDVNRNMHNLLGVKGL"
FT   mat_peptide     <1..48
FT                   /product="polymerase"
FT   mat_peptide     49..912
FT                   /product="coat protein"
XX
SQ   Sequence 1126 BP; 350 A; 214 C; 291 G; 271 T; 0 other;
     aacttcgaag attacgaaga tggtgctgaa gtgtgtgttt atcaccaggc aggtgagacg        60
     cttgatgccg gtctaacaga agagcagaag caggctgaaa aggagagaaa ggagagagag       120
     agatcagaga aagagcgaga aaggcaaaaa cagctagcgc tcaagaaagg caaaaacgca       180
     gcacaagaag agggcgaacg tgacaatgaa gtaaacgccg gaacttccgg aacttttagc       240
     gtgcctagac tcaaaagtct tacaagcaaa atgcgtgtgc cgaagtttga gaaaagagtt       300
     gctctcaacc tcgatcattt gatcttgtac acgccggagc agacagattt atccaacacg       360
     cgttcaacgc ggaagcagtt tgacacttgg tttgaaggtg tcatggctga ctatgagcta       420
     acggaggata aaatgcaaat aattctcaat ggtttaatgg tctggtgcat tgagaatgga       480
     acctccccaa acataaacgg aatgtgggtg atgatggacg gagatgatca ggtggaattc       540
     ccgatcaagc cgctcattga ccacgccaaa cccacattta ggcaaataat ggcccatttc       600
     agtgacgtag ctgaagcgta cattgaaaag cgtaaccagg accgaccata catgccacga       660
     tatggtcttc agcgtaattt aaccgacatg agcttagctc gttacgcgtt tgacttctac       720
     gaaatgattt ctagaactcc aatacgtgcg agagaggcac acatccagat gaaagcagca       780
     gcactgcgtg gcgcaaataa taatttgttc ggcttggatg gtaacgtcgg cacaacggta       840
     gagaacacgg aaaggcatac gaccgaagac gttaatcgga acatgcataa cttacttggc       900
     gttaaggggt tatgaagttg tatgctagta gactataagt agttaagttt actcgttagt       960
     attctcgctt atgggaaata tgtaagtttg ttaaagcagc cagtgtgact tcgtcatgtg      1020
     tgttgttgtt actttctata ttttcgccga actttttatt ggtgttagcg catgtggtga      1080
     gatactatct cgattgcctt aacatttgat aggaagcaag ggtcga                     1126
//