ID   EF490556; SV 1; linear; genomic RNA; STD; VRL; 1126 BP.
XX
AC   EF490556;
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DT   01-DEC-2010 (Rel. 107, Created)
DT   02-DEC-2010 (Rel. 107, Last updated, Version 2)
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DE   Turnip mosaic virus isolate tajz5-06 polyprotein gene, partial cds.
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KW   .
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OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-1126
RA   Liu J., Gao R., Wang H., Zhu X., Yu X., Li X.;
RT   "3'- terminal genomic sequence of Turnip mosaic virus";
RL   Unpublished.
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RN   [2]
RP   1-1126
RA   Liu J., Gao R., Wang H., Zhu X., Yu X., Li X.;
RT   ;
RL   Submitted (13-MAR-2007) to the INSDC.
RL   Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL   Daizong Street, Tai'an, Shandong 271018, China
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DR   MD5; a4ff27f81e7c5e1c25848aaa8302a812.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1126
FT                   /organism="Turnip mosaic virus"
FT                   /host="chinese cabbage"
FT                   /isolate="tajz5-06"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..915
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains NIb and CP"
FT                   /db_xref="GOA:E4VP88"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:E4VP88"
FT                   /protein_id="ABS20030.1"
FT                   /translation="IFEDYENGAEACVYHQAGETLDAGLTDEQKQAEKEKKEREKAEKE
FT                   RERQKQLALKKGKDVAQEEGIRDKEVNAGTSGTFSVPRLKSLTSKMRVPRYEQRVALNL
FT                   DHLILYTPEQTDLSNTRSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSP
FT                   NINGMWVMMDGDDQVEFPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYG
FT                   LQRNLTDMSLARYAFDFYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVE
FT                   NTERHTTEDVNRNMHNLLGVKGL"
FT   mat_peptide     <1..48
FT                   /product="polymerase"
FT   mat_peptide     49..912
FT                   /product="coat protein"
XX
SQ   Sequence 1126 BP; 343 A; 218 C; 303 G; 262 T; 0 other;
     atcttcgaag attacgaaaa tggcgctgag gcttgtgttt atcaccaggc aggtgaaacg        60
     cttgatgcag gtttgacgga cgagcaaaag caggcggaga aggagaagaa ggagagagag       120
     aaggcggaaa aggaacgaga gaggcagaag cagttggcac tcaagaaagg caaggatgtt       180
     gcacaagaag agggaatacg cgacaaggaa gtaaacgctg gaacttctgg aaccttcagt       240
     gtacccagac ttaagagtct gacaagcaag atgcgcgtgc caagatacga gcaaagagtg       300
     gctttaaacc tcgatcatct aatcctatac acgccggagc agacggatct atccaacaca       360
     cgttcaacgc gaaagcagtt tgacacatgg tttgaaggtg taatggctga ctatgaactg       420
     acggaggaca aaatgcaaat cattctcaat ggtttaatgg tctggtgcat tgagaacgga       480
     acctccccga acataaacgg aatgtgggtg atgatggacg gcgatgatca ggtggaattc       540
     ccgatcaaac cgctcattga ccacgccaaa cccacattta ggcagataat ggcccatttc       600
     agtgacgtag ctgaagcgta cattgaaaag cgtaaccaag accgaccata catgccacga       660
     tatggtcttc agcgcaattt aaccgacatg agcttagctc gatacgcatt tgatttctat       720
     gaaatgactt ctaggactcc aatacgtgcg agagaggcgc acatccagat gaaagcagca       780
     gcactgcgtg gcgcaaataa taatttgttc ggcttggatg gaaacgtcgg tacaacggta       840
     gagaacacgg agaggcatac gaccgaggac gttaatcgga acatgcataa cttacttggc       900
     gttaaggggt tatgaagttg tgtgctggta gactataagt atttaagttt actcgttagt       960
     attctcgctt atgggaaata tgtaagtttg ttaaagcagc cagtgtgact ctgtcatgtg      1020
     tgttgttgtt actttctata ttttcgccga acattttatt ggtgttagcg catgtggtga      1080
     ggatcgtcct cgattgcctt aacatttgat aggaagcaag ggtcga                     1126
//