ID   EF490545; SV 1; linear; genomic RNA; STD; VRL; 1126 BP.
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AC   EF490545;
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DT   01-DEC-2010 (Rel. 107, Created)
DT   02-DEC-2010 (Rel. 107, Last updated, Version 2)
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DE   Turnip mosaic virus isolate BJ2-06 polyprotein gene, partial cds.
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KW   .
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OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-1126
RA   Liu J., Gao R., Wang H., Zhu X., Yu X., Li X.;
RT   "3'- terminal genomic sequence of Turnip mosaic virus";
RL   Unpublished.
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RN   [2]
RP   1-1126
RA   Liu J., Gao R., Wang H., Zhu X., Yu X., Li X.;
RT   ;
RL   Submitted (13-MAR-2007) to the INSDC.
RL   Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL   Daizong Street, Tai'an, Shandong 271018, China
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DR   MD5; f1a398ba2e1c712e874bf4629a27fe15.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1126
FT                   /organism="Turnip mosaic virus"
FT                   /host="chinese cabbage"
FT                   /isolate="BJ2-06"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..915
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains NIb and CP"
FT                   /db_xref="GOA:E4VP77"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:E4VP77"
FT                   /protein_id="ABS20019.1"
FT                   /translation="IFEDYEDGAEACVYHQAGETLDAGLTDEQKQAEKEKKEREKAEKE
FT                   RERQKQLALKKGKDVAQEEGKRDKEVNAGTSGTFSVPRLKSLTSKMRVPRYEQRVALNL
FT                   DHLILYTPEQTDLSNTRSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSP
FT                   NINGMWVMMDGDDQVEFPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYG
FT                   LQRNLTDMSLARYAFDFYGMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVE
FT                   NTERHTTEDVNRNMHNLLGVKGL"
FT   mat_peptide     <1..48
FT                   /product="polymerase"
FT   mat_peptide     49..912
FT                   /product="coat protein"
XX
SQ   Sequence 1126 BP; 347 A; 216 C; 300 G; 263 T; 0 other;
     atcttcgaag attacgaaga tggtgctgag gcttgtgttt atcaccaggc aggtgaaacg        60
     cttgatgcgg gtttgacgga cgagcagaag caggcggaga aggagaagaa ggagagagag       120
     aaggcagaaa aggaacgaga gaggcagaag cagttggcac tcaagaaagg caaggacgtt       180
     gcacaagaag agggaaaacg tgacaaggaa gtaaacgctg gaacctctgg aaccttcagt       240
     gtacccagac ttaagagtct gacaagcaag atgcgcgtgc caagatacga gcaaagagtg       300
     gctttaaacc tcgatcatct aatcctatac acgccggagc agacggatct atccaacaca       360
     cgttcaacgc gaaagcagtt tgacacatgg tttgaaggtg taatggctga ctacgaactg       420
     acggaggaca aaatgcaaat cattctcaat ggtttaatgg tctggtgcat tgagaatgga       480
     acctccccaa atataaacgg aatgtgggtg atgatggacg gtgatgatca ggtggaattc       540
     ccgatcaaac cgctcattga ccacgccaaa cccacattta ggcaaataat ggcccatttc       600
     agtgacgtag ctgaagcgta cattgaaaag cgtaaccaag accgaccata catgccacga       660
     tatggtcttc agcgcaattt aaccgacatg agcttagctc ggtacgcatt tgatttctat       720
     ggaatgactt ctagaactcc aatacgtgcg agagaggcac acatccagat gaaagcagca       780
     gcactgcgtg gcgcaaataa taatttgttc ggcttggatg gtaacgtcgg cacaacggta       840
     gagaacacgg aaaggcatac gaccgaggac gttaaccgga acatgcataa cttacttggc       900
     gttaaggggt tatgaagttg tatgctagta gactataagt agttaagttt actcgttagt       960
     attctcgctt atgggaaata tgtaagtttg ttaaagcagc cagtgtgact tcgtcatgtg      1020
     tgttgttgtt actttctata ttttcgccga acattttatt ggtgttagcg catgtggtga      1080
     gattgtatct cgattgcctt aacatttgat aggaagcaag ggtcga                     1126
//