ID   EF490544; SV 1; linear; genomic RNA; STD; VRL; 1126 BP.
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AC   EF490544;
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DT   01-DEC-2010 (Rel. 107, Created)
DT   02-DEC-2010 (Rel. 107, Last updated, Version 2)
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DE   Turnip mosaic virus isolate BJ1-06 polyprotein gene, partial cds.
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KW   .
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OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-1126
RA   Liu J., Gao R., Wang H., Zhu X., Yu X., Li X.;
RT   "3'- terminal genomic sequence of Turnip mosaic virus";
RL   Unpublished.
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RN   [2]
RP   1-1126
RA   Liu J., Gao R., Wang H., Zhu X., Yu X., Li X.;
RT   ;
RL   Submitted (13-MAR-2007) to the INSDC.
RL   Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL   Daizong Street, Tai'an, Shandong 271018, China
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DR   MD5; 3a135c4accd1b375f0073f13b1be3235.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1126
FT                   /organism="Turnip mosaic virus"
FT                   /host="chinese cabbage"
FT                   /isolate="BJ1-06"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..915
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains NIb and CP"
FT                   /db_xref="GOA:E4VP76"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:E4VP76"
FT                   /protein_id="ABS20018.1"
FT                   /translation="IFQDYEDGAEVCVYHQAGETLDAGLTEEQKQAEKERKERERSEKE
FT                   RERQRQLALKKGKNAPQEEGERDNEVNVGTSGTFSVPRLKSLTSKMRVPKYEKRVALNL
FT                   DHLILYTPEQTDLSNTRSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSP
FT                   NINGMWVMMDGDDQVEFPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYG
FT                   LQRNLTDMSLARYAFDFYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVCTTVE
FT                   NTERHTTEDVNRNMHNLLGVQGL"
FT   mat_peptide     <1..48
FT                   /product="polymerase"
FT   mat_peptide     49..912
FT                   /product="coat protein"
XX
SQ   Sequence 1126 BP; 347 A; 217 C; 291 G; 271 T; 0 other;
     atcttccaag attacgaaga tggtgctgaa gtgtgtgttt atcaccaggc aggtgagacg        60
     cttgatgccg gtctaacaga agagcagaag caggctgaaa aggagagaaa ggagagagag       120
     agatcagaga aagagcgaga aaggcaaaga cagctagcgc ttaagaaagg caaaaacgca       180
     ccacaagaag agggcgaacg tgacaatgaa gtaaacgtcg gaacttccgg aacttttagc       240
     gtgcctagac tcaaaagtct tacaagcaaa atgcgtgtgc cgaagtatga gaaaagagtt       300
     gctctcaatc tcgatcattt gatcttatac acaccggagc agacagattt atccaacacg       360
     cgttcaacgc ggaagcagtt tgacacttgg tttgaaggtg tcatggctga ctatgagcta       420
     acggaggata aaatgcaaat aattctcaat ggtttaatgg tctggtgcat tgagaatgga       480
     acctccccga acataaacgg aatgtgggtg atgatggacg gagatgatca ggtggaattc       540
     ccgatcaagc cgctcattga ccacgccaaa cccacattta ggcaaataat ggcccatttc       600
     agtgacgtag ctgaagcgta cattgaaaag cgtaaccaag accgaccata catgccacga       660
     tatggtcttc agcgcaattt aaccgacatg agcttagctc gttacgcgtt tgatttctac       720
     gaaatgactt ctagaactcc aatacgtgcg agagaggcac acatccagat gaaagcagca       780
     gcactgcgtg gcgcaaataa taatttgttc ggcttggatg gtaacgtctg cacaacggta       840
     gagaacacgg aaaggcatac gaccgaggac gttaatcgga acatgcataa cttacttggc       900
     gttcaggggt tatgaagttg tatgctagta gactataagt agttaagttt actcgttagt       960
     attctcgctt atgggagata tgtgagtttg ttaaagcagc cagcgtgact ttgtcatgtg      1020
     tgttgttgtt actttctata ttttcgccga acattctatt ggtgttagcg catgtggtga      1080
     ggatcatcct cgattgcctt aacatttgat aggaagcaag ggtcga                     1126
//