ID   EF490537; SV 1; linear; genomic RNA; STD; VRL; 1126 BP.
XX
AC   EF490537;
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DT   01-DEC-2010 (Rel. 107, Created)
DT   02-DEC-2010 (Rel. 107, Last updated, Version 2)
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DE   Turnip mosaic virus isolate TAJZ5-05 polyprotein gene, partial cds.
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KW   .
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OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-1126
RA   Liu J., Wang H., Gao R., Zhu X., Yu X., Li X.;
RT   "3'- terminal genomic sequence of Turnip mosaic virus";
RL   Unpublished.
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RN   [2]
RP   1-1126
RA   Liu J., Wang H., Gao R., Zhu X., Yu X., Li X.;
RT   ;
RL   Submitted (13-MAR-2007) to the INSDC.
RL   Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL   Daizong Street, Tai'an, Shandong 271018, China
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DR   MD5; eb6dfa77706bbcaa4d73c200d7452513.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1126
FT                   /organism="Turnip mosaic virus"
FT                   /host="rape"
FT                   /lab_host="radish"
FT                   /isolate="TAJZ5-05"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..915
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains NIb and CP"
FT                   /db_xref="GOA:E4VP69"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:E4VP69"
FT                   /protein_id="ABS20011.1"
FT                   /translation="IFEDYEDGIEVCVYHQAGETLDAGLTDEQKQAEKERKEKERAEKE
FT                   RERQKQLALKKGKNAALEEGERDNEVNAGTSGTFSVPRLKSLTSKMRVPKYEKRVALNL
FT                   DHLILYTPEQTDLSNTRSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSP
FT                   NINGMWVMMDGDDQVEFPIKPLIDHAKPTFRQIVAHFSDVAEAYIEKRNQGRPYMPRYG
FT                   LQRNLTDMSLARYAFDFYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLKGTSATTVE
FT                   NTERHTTEDVNRNMHNLLGVKGL"
FT   mat_peptide     <1..48
FT                   /product="polymerase"
FT   mat_peptide     49..912
FT                   /product="coat protein"
XX
SQ   Sequence 1126 BP; 352 A; 216 C; 293 G; 265 T; 0 other;
     atcttcgaag attacgaaga cggtattgaa gtgtgtgtat atcaccaggc aggtgaaaca        60
     cttgatgcag gcctgacaga tgagcagaaa caggcagaaa aggagaggaa agagaaagag       120
     agagcagaga aagagcgcga aaggcaaaag cagttggcac tcaagaaagg caaaaacgca       180
     gcattagagg aaggcgaacg cgacaacgaa gtgaacgccg gaacctctgg aacttttagt       240
     gtgcctaggc tcaaaagcct aacgagcaaa atgcgtgtgc caaagtacga gaaaagagta       300
     gccctcaatc tcgatcatct gattctgtac acgccggagc aaacggatct atccaatacg       360
     cgttcaacgc ggaagcagtt tgacacttgg tttgaaggtg tcatggctga ctatgagcta       420
     acggaggata aaatgcaaat aattctcaat ggtttaatgg tctggtgcat tgagaatgga       480
     acctccccaa atataaacgg aatgtgggtg atgatggacg gtgatgatca ggtggaattc       540
     ccgatcaaac cgctcattga ccacgccaaa cccacattta ggcaaatagt ggcccatttc       600
     agtgacgtag ctgaagcgta cattgaaaag cgtaaccaag gccgaccata catgccacga       660
     tatggtcttc agcgcaattt aaccgacatg agcttagctc ggtacgcatt tgatttctat       720
     gaaatgactt ctagaactcc aatacgtgcg agagaggcac acatccagat gaaagcagca       780
     gcactgcgtg gcgcaaataa taatttgttc ggcttgaagg gtacgtcggc cacaacggta       840
     gagaacacgg aaaggcatac gaccgaggac gttaatcgga acatgcataa cttacttggc       900
     gttaaggggt tatgaagttg tatgctagta gactataagt agttaagttt actcgttagt       960
     attctcgctt atgggaaata tgtaagtttg ttaaagcagc cagtgtgact tcgtcatgtg      1020
     tgttgttgtt actttctata ttttcgccga acattttatt ggtgttagcg catgtggtga      1080
     gattgtatct cgattgcctt aacatttgat aggaagcaag ggtcga                     1126
//