ID   EF488996; SV 1; linear; genomic RNA; STD; VRL; 1360 BP.
XX
AC   EF488996;
XX
DT   01-MAR-2008 (Rel. 95, Created)
DT   29-MAY-2008 (Rel. 95, Last updated, Version 2)
XX
DE   Cucurbit aphid-borne yellows virus isolate Hubei RdRp and coat protein
DE   genes, partial cds.
XX
KW   .
XX
OS   Cucurbit aphid-borne yellows virus
OC   Viruses; Riboviria; Luteoviridae; Polerovirus.
XX
RN   [1]
RP   1-1360
RX   DOI; 10.1007/s00705-008-0083-0.
RX   PUBMED; 18414972.
RA   Xiang H.Y., Shang Q.X., Han C.G., Li D.W., Yu J.L.;
RT   "Complete sequence analysis reveals two distinct poleroviruses infecting
RT   cucurbits in China";
RL   Arch. Virol. 153(6):1155-1160(2008).
XX
RN   [2]
RP   1-1360
RA   Han C.;
RT   ;
RL   Submitted (11-MAR-2007) to the INSDC.
RL   Plant Pathology, China Agricultural University, No.2 Yuanmingyuan West
RL   Road, Handian District, Beijing 100094, China
XX
DR   MD5; 0fffc90a51282bd95a83379224f070c0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1360
FT                   /organism="Cucurbit aphid-borne yellows virus"
FT                   /host="cucurbit"
FT                   /isolate="Hubei"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:91753"
FT   CDS             <1..576
FT                   /codon_start=1
FT                   /product="RdRp"
FT                   /db_xref="GOA:B1NI73"
FT                   /db_xref="InterPro:IPR001795"
FT                   /db_xref="UniProtKB/TrEMBL:B1NI73"
FT                   /protein_id="ABS18238.1"
FT                   /translation="SVSDWLLEDDMEVRNRLTLDLNETTRRLRAAWLHCISNSVLCLSD
FT                   GTLLAQRVPGVQKSGSYNTSSSNSRIRVMAAYHCGAEWAIAMGDDALESACSNLERYKS
FT                   LGFKVEESSKLEFCSHIFEKEDLAIPVNKAKMLYKLIHGYEPECGNVEVLINYLAACFS
FT                   ILNELRSDPSLVETLHQWLVLPVQPQKI"
FT   misc_feature    577..775
FT                   /note="intergenic NCR"
FT   CDS             776..>1360
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:B1NI74"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:B1NI74"
FT                   /protein_id="ABS18239.1"
FT                   /translation="MNTAVARNQNAGRRRRRNQRSIRRDRVVVVNPSGGSSRGRRQRRN
FT                   RRRPNRGGRARGRSPGETFVFSKDNLTGSSSGSITFGPSLSESPAFSSGILKAYHEYKI
FT                   IMVQLEFISEASSTSSGSISYELDPHCKLSSLQSTINKFGITKNGLRRWTAKQINGMEW
FT                   HDATEDQFKILYKGNGSSSVAGSFRITIKCQV"
XX
SQ   Sequence 1360 BP; 372 A; 337 C; 337 G; 314 T; 0 other;
     agcgtttcgg actggcttct tgaagatgat atggaagtcc gaaaccgctt gacgctagat        60
     ttaaatgaaa ccacgcgccg attacgagca gcgtggttac attgcatatc aaacagcgtc       120
     ctctgccttt ctgatggaac attattagcg cagagagtcc caggcgtaca gaagagtggc       180
     agctacaata cgtcatcgag taattcccgt attcgggtga tggctgccta ccactgcggc       240
     gcggaatggg caatagcgat gggcgatgac gccctagagt cagcttgctc gaacctcgag       300
     cgttataaat cgctcggttt taaagtcgag gagtcctcaa aactggaatt ctgttctcac       360
     atctttgaga aggaggacct cgccattccg gtcaacaagg ccaaaatgct ttacaagctc       420
     atacatgggt atgaaccgga atgcggcaat gtggaagtgc tgatcaatta tttggccgcc       480
     tgtttctcaa ttctaaatga gttgcggtcc gatccttccc ttgtcgaaac tctccaccag       540
     tggctggtcc ttccagtgca gccacaaaag atataagggg agtataaaga acactagcca       600
     agcacacacg agttgcaagc attggaagta taagtctcgt taccaagagt ccacacaata       660
     gattacaaat ttctcgcagg attttctagc ggtctattgt ctgcagtgcc agttacggta       720
     ataggactct attttgtcta cctaaagatt tcagcacacg tgcgatcaat tgttaatgaa       780
     tacggccgtg gctagaaatc aaaatgcagg gaggcggagg cgaagaaatc agcgctctat       840
     acggcgcgac cgcgtggttg tggtcaaccc ctctggggga tcatcacgcg gaagacgaca       900
     acgaagaaac cgccgacgcc ctaatcgagg aggcagagct agaggaagga gcccaggcga       960
     aacattcgta ttttcaaagg acaatctcac gggcagttcc tcaggaagta tcaccttcgg      1020
     gccgtctcta tcagagagcc cagcattcag ctctggaata ctcaaggcct accatgaata      1080
     taagatcatc atggtccagc tggagttcat ctccgaggcc tcttccacct cctcgggctc      1140
     catctcttat gagttggacc cccactgcaa gcttagctcc ctccaatcca cgattaataa      1200
     atttggaatc accaagaatg gattgcgacg ttggacagct aagcagatca acgggatgga      1260
     atggcatgac gcaactgagg accaattcaa gatcctctat aaagggaacg gatcttcctc      1320
     ggttgcaggc agcttcagga tcaccatcaa gtgccaggtc                            1360
//