ID   EF488164; SV 1; linear; genomic RNA; STD; VRL; 1320 BP.
XX
AC   EF488164;
XX
DT   06-APR-2007 (Rel. 91, Created)
DT   06-APR-2007 (Rel. 91, Last updated, Version 1)
XX
DE   Capsicum chlorosis virus isolate CaCV PKK-2UD non-structural protein (NSs)
DE   gene, complete cds.
XX
KW   .
XX
OS   Capsicum chlorosis virus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Tospoviridae; Orthotospovirus;
OC   Capsicum chlorosis orthotospovirus.
XX
RN   [1]
RP   1-1320
RA   Khankhum S., Chiemsombat P., Hongprayoon R., Attathom T.;
RT   "Cloning and Expression of Non-Structural Protein Gene of Capsicum
RT   chlorosis virus Isolated from Peanut in Thailand";
RL   Unpublished.
XX
RN   [2]
RP   1-1320
RA   Khankhum S., Chiemsombat P.;
RT   ;
RL   Submitted (08-MAR-2007) to the INSDC.
RL   Center for Agricultural Biotechnology, Kasetsart University, Kamphaeng Saen
RL   Campus, Malaiman Road, Khamphaengsaen District, Nakhon Pathom 73140,
RL   Thailand
XX
DR   MD5; 9e982497bdd8cfc857395b0ee75aa558.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1320
FT                   /organism="Capsicum chlorosis virus"
FT                   /segment="S RNA"
FT                   /host="Arachis hypogaea L. (peanut)"
FT                   /isolate="CaCV PKK-2UD"
FT                   /mol_type="genomic RNA"
FT                   /country="Thailand"
FT                   /isolation_source="infected peanut leaf tissue"
FT                   /note="serogroup: WSMoV"
FT                   /db_xref="taxon:163325"
FT   gene            1..1320
FT                   /gene="NSs"
FT   CDS             1..1320
FT                   /codon_start=1
FT                   /gene="NSs"
FT                   /product="non-structural protein"
FT                   /db_xref="InterPro:IPR004915"
FT                   /db_xref="UniProtKB/TrEMBL:A4UTT0"
FT                   /protein_id="ABO72544.1"
FT                   /translation="MSTAKSAASEFVKSYGTRDNRAINDCYSVFNGEGVNFLNLFMHNN
FT                   AGIKSAFSINDLGRNEDIKIHEAEVVDTCHDYNYFEKFGLDITFCEHVMSLVVRKPGIK
FT                   NTGCKFSMHNQIFNPNANTLSIAPGTTLEEGFYEKSKIKPIELLPSDWCLDECWKNNFY
FT                   IATNGDFALDYGFSVMGKTTSYWRENISREKILSFKHKSLPDNTVPTNRLLSPSTVKGI
FT                   QLGSELAPETTIILSCKQNLSIDLKSQYRISFHGIQEEGAFARTFCIPFENKSRMICFY
FT                   AKTVADNSNERTTLIIKIVTKTVDSHSMRPNKNLFNCNKLLGAKIGLIDFCDSDPNYNQ
FT                   MIVKELLSVHTQFALNLSGTLEKPIIVFKMYDKELINGHVEVSGRILNYQVDADGNVYF
FT                   LSKTLEVLPRSLSTLSYLNSVAPTLWKESLEHQHFIVELK"
XX
SQ   Sequence 1320 BP; 439 A; 229 C; 249 G; 403 T; 0 other;
     atgtctactg caaagagtgc tgcttcagaa tttgtgaaga gctatggaac aagggataat        60
     agagctatca atgattgcta ttctgtattc aatggagaag gtgtcaattt cctcaatctg       120
     ttcatgcata acaatgcagg tattaaatct gcattcagca tcaatgattt gggaaggaat       180
     gaagatatca aaatccatga agctgaggtt gttgatacat gccatgatta taattacttt       240
     gagaaatttg gtttagacat aacattctgt gaacatgtga tgagtttggt cgtaaggaaa       300
     cctggcataa agaacacagg ctgcaagttc tcaatgcata atcagatctt caatccaaat       360
     gccaatacct tgtctattgc tccgggaacg accctagagg aaggtttcta tgaaaaaagt       420
     aagataaaac ccatcgagct ccttccctca gactggtgct tggatgaatg ctggaagaac       480
     aatttttaca tagctactaa tggagacttt gctttggatt atggattctc tgtaatgggt       540
     aaaacaactt cttactggag agagaacatc tctagggaaa agatcttatc tttcaaacat       600
     aaaagtctcc ctgataatac tgttccaacc aataggttgt tatccccatc tactgttaaa       660
     ggcattcagt tgggttctga gctagctcct gaaactacaa ttattttgtc atgcaaacaa       720
     aatcttagta ttgatctaaa atctcagtat cgcatttcat tccatggaat tcaagaggaa       780
     ggtgcttttg ctagaacttt ctgcattccc tttgaaaaca aatctagaat gatttgcttt       840
     tatgcaaaga cagttgctga caatagcaat gaaagaacaa ctttaattat aaaaatagtc       900
     acaaagactg ttgactctca ttcaatgaga cctaacaaaa atcttttcaa ctgcaataaa       960
     ctgttgggag caaaaattgg tttgattgat ttttgtgatt ctgatccaaa ttataatcag      1020
     atgattgtta aagagctgtt aagtgttcat acccaatttg cactcaacct atctgggaca      1080
     ttggaaaaac caatcattgt attcaagatg tatgataagg aattgataaa tgggcatgta      1140
     gaagtttcag gaaggattct gaattaccag gtagatgctg acggaaatgt ttattttctc      1200
     tcaaaaaccc tggaggtcct cccaagatcc ctatcaacct taagttactt aaatagtgtt      1260
     gcaccaacac tatggaaaga atccttagag catcaacact ttattgtgga gcttaaataa      1320
//