ID   EF486527; SV 1; linear; genomic RNA; STD; VRL; 1881 BP.
XX
AC   EF486527;
XX
DT   01-MAY-2008 (Rel. 95, Created)
DT   01-MAY-2008 (Rel. 95, Last updated, Version 1)
XX
DE   Turnip ringspot virus isolate M12 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Turnip ringspot virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Comovirus;
OC   unclassified Comovirus.
XX
RN   [1]
RP   1-1881
RA   Petrzik K., Kubelkova D., Spak J., Koloniuk I.;
RT   "Turnip ringspot virus and Radish mosaic virus - closely related
RT   comoviruses infecting Brassicaceae";
RL   Unpublished.
XX
RN   [2]
RP   1-1881
RA   Petrzik K.;
RT   ;
RL   Submitted (08-MAR-2007) to the INSDC.
RL   Department of Plant Virology, Biological Centre ASCR, Institute of Plant
RL   Molecular Biology, Branisovska 31, Ceske Budejovice 370 05, Czech Republic
XX
DR   MD5; a0991cc7268c78f46700daf77d5736d5.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1881
FT                   /organism="Turnip ringspot virus"
FT                   /isolate="M12"
FT                   /mol_type="genomic RNA"
FT                   /country="Russia"
FT                   /db_xref="taxon:392504"
FT   CDS             <1..1881
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:B2KKQ6"
FT                   /db_xref="InterPro:IPR003181"
FT                   /db_xref="InterPro:IPR003182"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:B2KKQ6"
FT                   /protein_id="ABS32295.1"
FT                   /translation="ASTTQSLLNKFANTRQMEGTPIETKFARTKIILTKVMAGGNILYT
FT                   ERLSDVLSNVEQRAAIAFQRTHVQHKKLVALATINVPENTGCALMMCYNSGIRGKAVVD
FT                   AYTASAEASTIWNPACQQQARLEINVNPCKSAWSYQFLRQSKGVFNVVCISGWTTTPST
FT                   DLSLTIDWYLSDKDAEPETYCAVGINPKIVLNRWMGKLSFPQGTDVTLRRMPLAIGGGA
FT                   GGTGLVYMNMPNALCSLWRYMRGGMSFEVIKLSSPYIKATIAFFIAFTDVDATVPNLEA
FT                   YPHKLVQFSEIQERVNISFDKEDFVMAWSTQVHNSVPLSEDGCPYLYAVVHDSVGSTIP
FT                   GDFNIGVVLKEMNEVESIGRHPGWKGARPLAVSPQGLRKSPSGVWNELFMVRGPPEAKS
FT                   TDVVQFTIDLVGVGIATKNPGAWSIETNNSPMNNLMRTATWKSGTFHFQVLMEGNPLIK
FT                   RGDWSSYCEVSLTQSTKVSTMSSRNWVMKDPSSWELEFDIKIEGPNDGFENWESHFSNQ
FT                   TSWFLVFSVFNPDQSTVFVVNGMIDDDCWFAGNTLMPPFLEPESVSSRHSFLSSVQFDY
FT                   GTTSSRRAPSLPADSEDEEGRRSERVRQLERYRERDDQNRGNLATFVRRS"
FT   mat_peptide     <1..1125
FT                   /product="CP-L"
FT   mat_peptide     1126..1878
FT                   /product="CP-S"
XX
SQ   Sequence 1881 BP; 548 A; 369 C; 458 G; 506 T; 0 other;
     gcgagcacca ctcaatcatt gttaaacaaa ttcgccaata cacggcagat ggaaggaaca        60
     ccaattgaga ctaagtttgc tagaactaag ataatcttga ctaaggttat ggctggtggt       120
     aatatcttgt acactgagcg cctaagtgat gttctttcca acgttgaaca acgagctgct       180
     attgcttttc agcggacgca tgtccaacat aagaaactcg tagcgctggc cactatcaat       240
     gtgcctgaaa acactgggtg cgctctgatg atgtgctaca atagcggtat tcgaggtaaa       300
     gcagttgttg acgcttatac agcctcagct gaagctagta ccatatggaa tccggcgtgt       360
     caacaacaag cgcgtttaga gataaatgtg aatccgtgta agagtgcctg gagttatcaa       420
     tttctacgac agtctaaagg agtgttcaac gtagtttgca tatcaggctg gaccacaaca       480
     ccatcgacag acctttcact cacaatagat tggtatctta gtgataagga tgcagaacca       540
     gaaacatatt gtgctgttgg aatcaatccc aagattgttc tcaatcgctg gatgggaaag       600
     ctttcctttc cgcaaggtac agatgttacg ctacgtagaa tgccacttgc tataggtggg       660
     ggtgccggag gaacaggact ggtatacatg aatatgccca atgctttgtg ctctctgtgg       720
     agatatatgc gcggtggaat gtcctttgaa gtcattaaat tgagttctcc ctacattaag       780
     gccaccatag cgttttttat tgcgttcaca gacgttgatg ccacagtccc aaatctagaa       840
     gcctatcccc acaagttggt ccagttttcg gaaatacaag agagggttaa catatccttt       900
     gataaggaag atttcgtgat ggcctggtcc acacaagtgc acaatagcgt tcctctgtcc       960
     gaagatggtt gtccttattt gtatgccgtg gttcatgaca gtgttggctc gacaatacct      1020
     ggagatttca atattggagt agtgctcaaa gaaatgaatg aggttgaatc cataggaaga      1080
     catcctggct ggaaaggagc gcgaccactg gctgtgagtc cacagggtct acggaagagt      1140
     ccctctggtg tttggaatga attgtttatg gttagaggac ctccagaagc taaatcaact      1200
     gatgttgttc agtttacgat agatcttgtt ggggttggaa tagcgacaaa gaatccagga      1260
     gcatggtcta tagaaacaaa taacagccca atgaacaacc ttatgcggac ggcaacctgg      1320
     aagagcggga cttttcattt tcaagtgcta atggaaggga atccacttat taagagagga      1380
     gattggtctt catattgtga ggtttcccta acacaaagta ctaaggtctc taccatgtca      1440
     agcagaaact gggttatgaa agatccttca tcgtgggaac tagaatttga cattaaaatt      1500
     gaaggtccta atgacggatt tgaaaactgg gagtcacatt tcagcaatca aacaagttgg      1560
     tttctcgtct tctctgtttt caacccagac caatcaactg tctttgtggt gaatggaatg      1620
     atagatgatg attgttggtt tgctggcaat actctgatgc caccgtttct tgaaccggaa      1680
     agtgtcagta gtaggcattc atttctgtca tcagttcaat ttgactatgg gactacatca      1740
     agtagaaggg caccttctct accagcagac agcgaagatg aagaggggag aaggtcagag      1800
     agggttcgac agttagaaag gtacagagaa agagatgatc aaaatcgagg aaatcttgca      1860
     acattcgtgc gacgctctta a                                                1881
//