ID   EF486526; SV 1; linear; genomic RNA; STD; VRL; 1863 BP.
XX
AC   EF486526;
XX
DT   01-MAY-2008 (Rel. 95, Created)
DT   01-MAY-2008 (Rel. 95, Last updated, Version 1)
XX
DE   Radish mosaic virus isolate RaMV1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Radish mosaic virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Comovirus.
XX
RN   [1]
RP   1-1863
RA   Petrzik K., Kubelkova D., Spak J., Koloniuk I.;
RT   "Turnip ringspot virus and Radish mosaic virus - closely related
RT   comoviruses infecting Brassicaceae";
RL   Unpublished.
XX
RN   [2]
RP   1-1863
RA   Petrzik K.;
RT   ;
RL   Submitted (08-MAR-2007) to the INSDC.
RL   Department of Plant Virology, Biological Centre ASCR, Institute of Plant
RL   Molecular Biology, Branisovska 31, Ceske Budejovice 370 05, Czech Republic
XX
DR   MD5; 70791b0129bb17273d2bff00b82cfad3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1863
FT                   /organism="Radish mosaic virus"
FT                   /isolate="RaMV1"
FT                   /mol_type="genomic RNA"
FT                   /country="Czech Republic"
FT                   /db_xref="taxon:328061"
FT   CDS             <1..1863
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:B2KKQ5"
FT                   /db_xref="InterPro:IPR003181"
FT                   /db_xref="InterPro:IPR003182"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:B2KKQ5"
FT                   /protein_id="ABS32294.1"
FT                   /translation="TSMTRSLLNRFSSANETEGTPLDTKIARTKILLTKVMAGGKILYT
FT                   ARLSDVLLNKDQRAAISFQRTHVQHKKLIALATLGIPENTGCALMMCYNSGVRGKAVVD
FT                   AYTASAEASVIWNPACQRQAMLEIDVNPCQSAWSYQYLRQTNSYFNVVCISGWTTTPLT
FT                   DLSMTIDWYLSSEESETSIYYASGGNSVIKLNRWMGRLIFPQGTETTMQRMPLAIGGGA
FT                   GGNGLVYMNMPNALCSLWRYMKGGVKFEVIKLSSPYVKATIAFFIAFTDVDATLPNLEA
FT                   YPHKLVQFAEIQDRVTIEFDKDEFVMAWSSQVHTNVPLDQDGCPYLYAVVHDCAGSTIP
FT                   GDFNIGVVLKEMVDVEAIGRHPGWKGARPLPASPQGLRKSSSGVWNELYTVRAPPEAKS
FT                   TDVVQFAIDLIGVGISTAGRGTWSLETSNSPMNNLLRTATWKSGTIHFQVLMEGNPLIK
FT                   RGDWASYCEISLVQSAKDTTLSSRNWVMKDPSSWELEFDIKIEGPNAGFENWEAHLSNQ
FT                   TSWYLTFAIYNPDQTTTFTVNGMLNDDFCCAGNTLMPPFLEPQSTFSEKTPLSQMTFSY
FT                   EDNLVRDVDPPDQENVQERPETSSDQDRRLLQQRKRGFNNKFVF"
FT   mat_peptide     <1..1125
FT                   /product="CP-L"
FT   mat_peptide     1126..1860
FT                   /product="CP-S"
XX
SQ   Sequence 1863 BP; 557 A; 367 C; 444 G; 495 T; 0 other;
     acatctatga cgcgctcatt gcttaacaga ttttcctcag ccaatgaaac agagggaacg        60
     ccacttgata ctaagatagc aagaactaag atcttgttaa cgaaggtcat ggctggggga       120
     aagattttgt acacagcacg tttaagtgat gttctcctta ataaagatca acgagcagct       180
     atttctttcc aaagaaccca tgttcagcac aaaaagttaa ttgctttagc aaccttagga       240
     atcccagaaa acactgggtg cgctctgatg atgtgctaca acagtggagt gcgtggcaaa       300
     gcagttgttg atgcttatac agcgtcagca gaagctagtg tgatttggaa tccagcgtgt       360
     caaagacaag caatgcttga aatagatgtg aacccatgcc agagcgcctg gagctatcag       420
     tacctcagac aaaccaacag ctattttaat gtagtatgta tttcaggttg gacaacaact       480
     cccttaacgg atttgtctat gaccatagat tggtatttga gttctgagga aagcgagact       540
     tccatttact atgcctcagg cggcaattct gtgataaagc tgaaccgatg gatggggcgt       600
     ttgattttcc cacagggaac ggaaactaca atgcagcgga tgcccttagc tataggaggt       660
     ggtgcgggag gaaatggatt ggtgtatatg aatatgccta atgccttgtg ttctctatgg       720
     agatacatga aaggaggcgt taagtttgag gtaatcaagc ttagttcccc ctacgtaaag       780
     gcgaccatag ctttcttcat agccttcaca gatgttgatg caacattgcc aaatcttgaa       840
     gcgtatcccc acaaacttgt tcaatttgca gaaatacagg acagggtaac aattgagttt       900
     gataaagatg aatttgttat ggcctggtca tcacaggtac atactaatgt gcctttggac       960
     caggatggtt gcccttattt gtatgcggtt gttcacgact gtgcaggttc caccattcca      1020
     ggagatttca atataggagt tgttctgaaa gaaatggttg atgtggaggc tattggaagg      1080
     catccaggat ggaaaggggc tcgccctttg ccagcgtcac cacaaggcct gaggaaaagt      1140
     tcatcgggag tgtggaatga attatacaca gtaagagctc cccctgaagc caaatccact      1200
     gacgttgttc aatttgcaat tgatcttata ggtgttggaa tatccacagc aggacgtggg      1260
     acgtggtctt tagagactag taacagtccc atgaacaatt tactgagaac agccacgtgg      1320
     aaaagcggga ctattcattt tcaggtgctt atggaaggga atccactgat caagagagga      1380
     gattgggctt cctactgtga aatctctctg gttcagagtg ctaaggacac cacattatcc      1440
     agccgaaatt gggtgatgaa ggatccctcc tcatgggaat tggagttcga catcaaaatt      1500
     gaaggaccta atgctggttt tgaaaattgg gaagctcatt tgagtaatca aacgagctgg      1560
     tacttaacat ttgctattta caaccctgat caaaccacta cgttcaccgt gaatggaatg      1620
     ctcaatgatg acttttgttg tgctggcaat acactaatgc caccatttct cgaaccacaa      1680
     agcacatttt cagaaaagac acctctatct cagatgacct tcagttatga ggacaatctg      1740
     gtaagagatg ttgatccacc ggatcaagag aatgtgcaag aaagaccgga aacgagcagt      1800
     gatcaagatc gcagactgtt acagcaaaga aaacgtggtt ttaacaataa atttgtcttt      1860
     tag                                                                    1863
//