ID   EF467924; SV 1; linear; genomic RNA; STD; VRL; 1581 BP.
XX
AC   EF467924;
XX
DT   01-APR-2008 (Rel. 95, Created)
DT   19-JUN-2008 (Rel. 96, Last updated, Version 2)
XX
DE   Pineapple mealybug wilt-associated virus 1 clone pDF1Hu4R21 RNA dependant
DE   RNA polymerase gene, partial cds; unknown protein gene, complete cds; and
DE   heat shock 70-like protein gene, partial cds.
XX
KW   .
XX
OS   Pineapple mealybug wilt-associated virus 1
OC   Viruses; Riboviria; Closteroviridae; Ampelovirus.
XX
RN   [1]
RP   1-1581
RA   Gambley C.F., Steele V., Geering A.D.W., Thomas J.E.;
RT   "The genetic diversity of ampeloviruses in Australian pineapples and their
RT   association with mealybug wilt disease";
RL   Australas. Plant Pathol. 37:95-105(2008).
XX
RN   [2]
RP   1-1581
RA   Gambley C.F., Steele V., Geering A.D.W., Thomas J.E.;
RT   ;
RL   Submitted (03-MAR-2007) to the INSDC.
RL   Department of Primary Industries and Fisheries, 80 Meiers Rd,
RL   Indooroopilly, Brisbane, QLD 4068, Australia
XX
DR   MD5; cba16f7afee51157ead20cc2a834c2f3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1581
FT                   /organism="Pineapple mealybug wilt-associated virus 1"
FT                   /host="Ananas comosus commercial hybrid"
FT                   /isolate="A5"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /clone="pDF1Hu4R21"
FT                   /db_xref="taxon:180903"
FT   CDS             <1..1243
FT                   /codon_start=2
FT                   /product="RNA dependant RNA polymerase"
FT                   /note="RdRp; ORF1b; presumably translated by a +1 ribosomal
FT                   frameshift"
FT                   /db_xref="GOA:B2BD51"
FT                   /db_xref="InterPro:IPR001788"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:B2BD51"
FT                   /protein_id="ABR68937.1"
FT                   /translation="AGVVKSLWHPDVTDEVMAVVDDFFGSYVDSRKLSEVLVDPVEPNI
FT                   FDLADWLLSRTPMGKKALMMELENPVELGTNLNRFKLMVKADVKFKTDLECLSEVPPGQ
FT                   NIVFHDRAICAHFSVCFRELVNRLRTVVHKNIVLFNGLSFEEFADQLSAALNDESIDTF
FT                   NCDEVDISKYDKSQSTFTKAVELEIYRRLGLPEKILQVWAASEFFGKAVTNKRSFSAEV
FT                   YAQRRTGAANTWIGNTVINMMLLSQSVDVTSLNAVCFAGDDSLILKKGVPGVNFDVYDL
FT                   KYEFDVKYFDCASKYFCGKFLIENSGKIKVMPDPFKIFVKFGKERPETDKILLEQWQSF
FT                   FDITEAYTSDANISKLVSSFANKWVSSPHAYESFCTINSLRSNPEQFKRLWFDLYAYNH
FT                   SRFEAQVRSDVKSG"
FT   CDS             1227..1382
FT                   /codon_start=1
FT                   /product="unknown protein"
FT                   /note="ORF2"
FT                   /db_xref="GOA:Q8V3A2"
FT                   /db_xref="UniProtKB/TrEMBL:Q8V3A2"
FT                   /protein_id="ABR68938.1"
FT                   /translation="MLRVDNFLWAIYLITFIALCAIIIVLILLFQRVLWPNSLPPNNPV
FT                   PHGGGY"
FT   CDS             1366..>1581
FT                   /codon_start=1
FT                   /product="heat shock 70-like protein"
FT                   /note="HSP70"
FT                   /db_xref="UniProtKB/TrEMBL:B2BD53"
FT                   /protein_id="ABR68939.1"
FT                   /translation="MEVGIDFGTTYSTLCFSPGKGNDGCVVESDTIFIPTVVGYRKDNT
FT                   HAIGLGALLEKDLEVYRDIKRYFGLNK"
XX
SQ   Sequence 1581 BP; 463 A; 265 C; 373 G; 480 T; 0 other;
     tgcgggtgta gttaaatctt tgtggcatcc agatgtaaca gacgaagtaa tggctgtggt        60
     agatgacttt ttcggatcat atgtggattc tcgaaaattg agtgaagtgt tggtggatcc       120
     tgtagaacca aatatatttg atttagccga ttggttgttg agcagaactc caatgggaaa       180
     gaaagcttta atgatggaat tggaaaatcc tgttgaacta ggtacaaatt tgaataggtt       240
     taagctgatg gtaaaagcgg atgtaaaatt taaaacagat ttggagtgtc tgtcggaagt       300
     accacctggg cagaatatag ttttccatga cagagcgata tgcgcacact tctccgtgtg       360
     ttttagagaa ttggtcaata gattgcgcac agtcgtacac aaaaatattg tacttttcaa       420
     cggattaagt tttgaagaat ttgctgatca gttgagcgcg gcgcttaacg atgagtcaat       480
     tgatacgttc aattgtgacg aggtagacat atctaaatac gacaaatccc aatccacgtt       540
     cacaaaagcc gtagaattgg aaatctacag gaggttaggt ttaccagaaa agattcttca       600
     agtctgggca gccagcgagt tctttggcaa agctgttact aataagaggt cattttctgc       660
     ggaggtgtat gcccaacgtc gcacaggtgc tgcgaatacg tggataggaa acactgtaat       720
     caacatgatg ttgctttcac agagtgtaga cgtgacatca ttgaacgcag tctgttttgc       780
     cggtgatgac tcactgattc tcaagaaagg tgttcctggc gttaatttcg atgtctacga       840
     tttgaagtat gagttcgatg tcaaatactt tgattgtgcc tccaaatatt tttgtggtaa       900
     gtttttaatt gaaaactcgg gaaagattaa agtgatgcct gatcctttta aaatttttgt       960
     gaagttcggt aaagaacgac ctgaaacaga taagattttg ctggagcagt ggcagtcctt      1020
     ttttgatata accgaagctt acacttcgga cgcgaacata tcaaagttgg tatcgagttt      1080
     cgcaaacaag tgggtatcat ctccacatgc ttacgaaagc ttttgtacca taaattcttt      1140
     acgcagcaac ccagaacaat tcaagaggtt gtggttcgat ttgtatgctt acaatcattc      1200
     cagatttgag gcacaggtaa gatctgatgt taagagtgga taactttctt tgggcaatat      1260
     acttgataac tttcatagca ctttgcgcga tcatcatcgt tttgatattg ttgtttcaaa      1320
     gagtgctttg gccgaacagt ttaccaccaa acaatccagt acctcatgga ggtgggtatt      1380
     gattttggca ctacctattc cactctgtgt ttctctccag gtaaaggaaa tgatggttgt      1440
     gtggtagaga gtgacacgat atttatacct actgtcgttg gttacaggaa ggacaacact      1500
     cacgccatag gtttgggggc actgttggaa aaagacttag aggtttatcg tgatataaaa      1560
     aggtatttcg gactcaacaa g                                                1581
//